RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 CHMP3Q9Y3E7 222 aa13.99□□□□□ -0.17
CLK4-206ENST00000520878 AMOTQ4VCS5 1084 aa13.98□□□□□ -0.17
CLK4-206ENST00000520878 NUTM1Q86Y26 1132 aa13.98□□□□□ -0.17
CLK4-206ENST00000520878 PLEKHM2Q8IWE5 1019 aa13.98□□□□□ -0.17
CLK4-206ENST00000520878 GSE1Q14687 1217 aa13.98□□□□□ -0.17
CLK4-206ENST00000520878 DDX54Q8TDD1 881 aaKnown RBP13.98□□□□□ -0.17
CLK4-206ENST00000520878 ANO2Q9NQ90 1003 aa13.98□□□□□ -0.17
CLK4-206ENST00000520878 NRXN3Q9Y4C0 1643 aa13.98□□□□□ -0.17
CLK4-206ENST00000520878 UBR1Q8IWV7 1749 aa13.97□□□□□ -0.17
CLK4-206ENST00000520878 TOM1L2Q6ZVM7 507 aa13.97□□□□□ -0.17
CLK4-206ENST00000520878 KIF20BQ96Q89 1820 aa13.97□□□□□ -0.17
CLK4-206ENST00000520878 NCLP19338 710 aaKnown RBP13.97□□□□□ -0.17
CLK4-206ENST00000520878 FOXD4L5Q5VV16 416 aaPredicted RBP13.97□□□□□ -0.17
CLK4-206ENST00000520878 FOXD4L4Q8WXT5 416 aaPredicted RBP13.97□□□□□ -0.17
CLK4-206ENST00000520878 AXIN2Q9Y2T1 843 aa13.97□□□□□ -0.17
CLK4-206ENST00000520878 NPHP4O75161 1426 aaPredicted RBP13.97□□□□□ -0.17
CLK4-206ENST00000520878 ADGRB2O60241 1585 aa13.97□□□□□ -0.17
CLK4-206ENST00000520878 AKAP4Q5JQC9 854 aa13.97□□□□□ -0.17
CLK4-206ENST00000520878 KIAA0232Q92628 1395 aa13.97□□□□□ -0.17
CLK4-206ENST00000520878 DNAAF4Q8WXU2 420 aa13.96□□□□□ -0.17
CLK4-206ENST00000520878 PTCH1Q13635 1447 aa13.96□□□□□ -0.17
CLK4-206ENST00000520878 JARID2Q92833 1246 aaPredicted RBP13.96□□□□□ -0.17
CLK4-206ENST00000520878 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.96□□□□□ -0.18
CLK4-206ENST00000520878 PNMA6EA0A0J9YXQ4 647 aa13.95□□□□□ -0.18
CLK4-206ENST00000520878 SDSP20132 328 aa13.95□□□□□ -0.18
CLK4-206ENST00000520878 ARHGEF25Q86VW2 580 aa13.95□□□□□ -0.18
CLK4-206ENST00000520878 TTC22Q5TAA0 569 aa13.95□□□□□ -0.18
CLK4-206ENST00000520878 PPP1R42Q7Z4L9 355 aa13.95□□□□□ -0.18
CLK4-206ENST00000520878 CADPS2Q86UW7 1296 aa13.95□□□□□ -0.18
CLK4-206ENST00000520878 NFATC2IPQ8NCF5 419 aa13.95□□□□□ -0.18
CLK4-206ENST00000520878 CHMP5Q9NZZ3 219 aa13.95□□□□□ -0.18
CLK4-206ENST00000520878 DIP2AQ14689 1571 aa13.95□□□□□ -0.18
CLK4-206ENST00000520878 SIL1Q9H173 461 aa13.95□□□□□ -0.18
CLK4-206ENST00000520878 RNMTO43148 476 aaKnown RBP13.94□□□□□ -0.18
CLK4-206ENST00000520878 NEXNQ0ZGT2 675 aa13.94□□□□□ -0.18
CLK4-206ENST00000520878 MAP3K2Q9Y2U5 619 aa13.94□□□□□ -0.18
CLK4-206ENST00000520878 DDX58O95786 925 aaKnown RBP13.94□□□□□ -0.18
CLK4-206ENST00000520878 SPG7Q9UQ90 795 aa13.94□□□□□ -0.18
CLK4-206ENST00000520878 RTL1A6NKG5 1358 aa13.94□□□□□ -0.18
CLK4-206ENST00000520878 PRAMEF22A3QJZ6 481 aa13.94□□□□□ -0.18
CLK4-206ENST00000520878 REC8O95072 547 aa13.94□□□□□ -0.18
CLK4-206ENST00000520878 KCNJ4P48050 445 aa13.94□□□□□ -0.18
CLK4-206ENST00000520878 DBF4Q9UBU7 674 aaPredicted RBP13.94□□□□□ -0.18
CLK4-206ENST00000520878 CABP4P57796 275 aa13.93□□□□□ -0.18
CLK4-206ENST00000520878 EIF4A1P60842 406 aaKnown RBP13.93□□□□□ -0.18
CLK4-206ENST00000520878 PTCD1O75127 700 aaKnown RBP13.93□□□□□ -0.18
CLK4-206ENST00000520878 GSPT1P15170 499 aaKnown RBP13.93□□□□□ -0.18
CLK4-206ENST00000520878 MCCP23508 829 aa13.93□□□□□ -0.18
CLK4-206ENST00000520878 CWF19L2Q2TBE0 894 aaKnown RBP13.93□□□□□ -0.18
CLK4-206ENST00000520878 TMEM94Q12767 1356 aa13.93□□□□□ -0.18
CLK4-206ENST00000520878 EIF5BO60841 1220 aaKnown RBP13.92□□□□□ -0.18
CLK4-206ENST00000520878 ANKARQ7Z5J8 1434 aa13.92□□□□□ -0.18
CLK4-206ENST00000520878 NBPF7P0C2Y1 421 aaPredicted RBP13.92□□□□□ -0.18
CLK4-206ENST00000520878 MX1P20591 662 aa13.92□□□□□ -0.18
CLK4-206ENST00000520878 KIAA1211Q6ZU35 1233 aa13.92□□□□□ -0.18
CLK4-206ENST00000520878 CRB1P82279 1406 aa13.92□□□□□ -0.18
CLK4-206ENST00000520878 ARHGAP23Q9P227 1491 aa13.91□□□□□ -0.18
CLK4-206ENST00000520878 PDE1AP54750 535 aa13.91□□□□□ -0.18
CLK4-206ENST00000520878 ATP8B2P98198 1209 aa13.91□□□□□ -0.18
CLK4-206ENST00000520878 FOXD4L6Q3SYB3 417 aaPredicted RBP13.91□□□□□ -0.18
CLK4-206ENST00000520878 FOXD4L3Q6VB84 417 aaPredicted RBP13.91□□□□□ -0.18
CLK4-206ENST00000520878 SYTL4Q96C24 671 aaPredicted RBP13.91□□□□□ -0.18
CLK4-206ENST00000520878 USP44Q9H0E7 712 aa13.91□□□□□ -0.18
CLK4-206ENST00000520878 ST18O60284 1047 aa13.91□□□□□ -0.18
CLK4-206ENST00000520878 IFIT2P09913 472 aaKnown RBP13.91□□□□□ -0.18
CLK4-206ENST00000520878 ITSN1Q15811 1721 aa13.9□□□□□ -0.18
CLK4-206ENST00000520878 FER1L4A9Z1Z3 1794 aa13.9□□□□□ -0.18
CLK4-206ENST00000520878 NPHP3Q7Z494 1330 aa13.9□□□□□ -0.18
CLK4-206ENST00000520878 CEP170BQ9Y4F5 1589 aaPredicted RBP13.9□□□□□ -0.18
CLK4-206ENST00000520878 G3BP1Q13283 466 aaKnown RBP eCLIP13.9□□□□□ -0.18
CLK4-206ENST00000520878 C3P01024 1663 aa13.9□□□□□ -0.18
CLK4-206ENST00000520878 GOLGA6L22H0YM25 854 aa13.9□□□□□ -0.18
CLK4-206ENST00000520878 ERC2O15083 957 aa13.9□□□□□ -0.18
CLK4-206ENST00000520878 NEK4P51957 841 aa13.9□□□□□ -0.18
CLK4-206ENST00000520878 PROSER3Q2NL68 480 aa13.9□□□□□ -0.18
CLK4-206ENST00000520878 SLIT1O75093 1534 aa13.9□□□□□ -0.18
CLK4-206ENST00000520878 CLASRPQ8N2M8 674 aaKnown RBP13.89□□□□□ -0.19
CLK4-206ENST00000520878 PA2G4Q9UQ80 394 aaKnown RBP13.89□□□□□ -0.19
CLK4-206ENST00000520878 KDRP35968 1356 aa13.89□□□□□ -0.19
CLK4-206ENST00000520878 IFNL2Q8IZJ0 200 aa13.89□□□□□ -0.19
CLK4-206ENST00000520878 ADGRL3Q9HAR2 1447 aa13.89□□□□□ -0.19
CLK4-206ENST00000520878 RIMS1Q86UR5 1692 aaKnown RBP13.88□□□□□ -0.19
CLK4-206ENST00000520878 SSH2Q76I76 1423 aa13.88□□□□□ -0.19
CLK4-206ENST00000520878 ATP5J2-PTCD1G3V325 749 aa13.88□□□□□ -0.19
CLK4-206ENST00000520878 MYD88Q99836 296 aa13.88□□□□□ -0.19
CLK4-206ENST00000520878 HDAC5Q9UQL6 1122 aa13.88□□□□□ -0.19
CLK4-206ENST00000520878 K7ELQ4 463 aaPredicted RBP13.87□□□□□ -0.19
CLK4-206ENST00000520878 COPS6Q7L5N1 327 aa13.87□□□□□ -0.19
CLK4-206ENST00000520878 GBP4Q96PP9 640 aa13.87□□□□□ -0.19
CLK4-206ENST00000520878 DIAPH3Q9NSV4 1193 aa13.87□□□□□ -0.19
CLK4-206ENST00000520878 XAGE3Q8WTP9 111 aa13.87□□□□□ -0.19
CLK4-206ENST00000520878 ANKRD26Q9UPS8 1709 aa13.86□□□□□ -0.19
CLK4-206ENST00000520878 GPATCH3Q96I76 525 aa13.86□□□□□ -0.19
CLK4-206ENST00000520878 GIGYF1O75420 1035 aaPredicted RBP13.86□□□□□ -0.19
CLK4-206ENST00000520878 RABEP1Q15276 862 aa13.86□□□□□ -0.19
CLK4-206ENST00000520878 RHPN1Q8TCX5 695 aa13.86□□□□□ -0.19
CLK4-206ENST00000520878 HSP90AB4PQ58FF6 505 aa13.86□□□□□ -0.19
CLK4-206ENST00000520878 ZNF790Q6PG37 636 aa13.86□□□□□ -0.19
CLK4-206ENST00000520878 CWC27Q6UX04 472 aaKnown RBP13.86□□□□□ -0.19
CLK4-206ENST00000520878 UPF3BQ9BZI7 483 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms