RNA–Protein interactions for RNA: ENST00000520571.1

DENND3-213, Transcript of DENN domain containing 3, humanhuman

TSL 2

Gene DENND3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-213ENST00000520571 FCHSD2O94868 740 aa18.38■□□□□ 0.53
DENND3-213ENST00000520571 ATP6V1AP38606 617 aa18.38■□□□□ 0.53
DENND3-213ENST00000520571 LRP5O75197 1615 aa18.38■□□□□ 0.53
DENND3-213ENST00000520571 VIRMAQ69YN4 1812 aaKnown RBP18.37■□□□□ 0.53
DENND3-213ENST00000520571 MYBBP1AQ9BQG0 1328 aaKnown RBP18.37■□□□□ 0.53
DENND3-213ENST00000520571 C5P01031 1676 aa18.37■□□□□ 0.53
DENND3-213ENST00000520571 CASZ1Q86V15 1759 aa18.37■□□□□ 0.53
DENND3-213ENST00000520571 GNAT3A8MTJ3 354 aa18.36■□□□□ 0.53
DENND3-213ENST00000520571 PTCD1O75127 700 aaKnown RBP18.36■□□□□ 0.53
DENND3-213ENST00000520571 HMGB2P26583 209 aaKnown RBP18.36■□□□□ 0.53
DENND3-213ENST00000520571 AK7Q96M32 723 aa18.36■□□□□ 0.53
DENND3-213ENST00000520571 MAP3K5Q99683 1374 aa18.36■□□□□ 0.53
DENND3-213ENST00000520571 SLC52A2Q9HAB3 445 aa18.36■□□□□ 0.53
DENND3-213ENST00000520571 PPP1R1BQ9UD71 204 aaPredicted RBP18.36■□□□□ 0.53
DENND3-213ENST00000520571 TAF1LQ8IZX4 1826 aa18.35■□□□□ 0.53
DENND3-213ENST00000520571 PNPLA7Q6ZV29 1317 aa18.35■□□□□ 0.53
DENND3-213ENST00000520571 NEFMP07197 916 aa18.35■□□□□ 0.53
DENND3-213ENST00000520571 ITPK1Q13572 414 aa18.35■□□□□ 0.53
DENND3-213ENST00000520571 LINC00116Q8NCU8 138 aa18.35■□□□□ 0.53
DENND3-213ENST00000520571 TUBGCP6Q96RT7 1819 aa18.33■□□□□ 0.53
DENND3-213ENST00000520571 IL17REQ8NFR9 667 aa18.33■□□□□ 0.52
DENND3-213ENST00000520571 MTFR1LQ9H019 292 aa18.33■□□□□ 0.52
DENND3-213ENST00000520571 PRKRIP1Q9H875 184 aaPredicted RBP18.33■□□□□ 0.52
DENND3-213ENST00000520571 C4BP0C0L5 1744 aa18.32■□□□□ 0.52
DENND3-213ENST00000520571 TEFQ10587 303 aa18.32■□□□□ 0.52
DENND3-213ENST00000520571 SLC39A6Q13433 755 aa18.32■□□□□ 0.52
DENND3-213ENST00000520571 RTF1Q92541 710 aaKnown RBP18.32■□□□□ 0.52
DENND3-213ENST00000520571 SLC4A9Q96Q91 983 aa18.32■□□□□ 0.52
DENND3-213ENST00000520571 PHF14O94880 888 aa18.31■□□□□ 0.52
DENND3-213ENST00000520571 SMIM5Q71RC9 77 aa18.31■□□□□ 0.52
DENND3-213ENST00000520571 COL23A1Q86Y22 540 aaPredicted RBP18.31■□□□□ 0.52
DENND3-213ENST00000520571 GNPATO15228 680 aa18.3■□□□□ 0.52
DENND3-213ENST00000520571 PNNQ9H307 717 aaKnown RBP18.3■□□□□ 0.52
DENND3-213ENST00000520571 QSER1Q2KHR3 1735 aa18.29■□□□□ 0.52
DENND3-213ENST00000520571 MAPK8IP3Q9UPT6 1336 aa18.29■□□□□ 0.52
DENND3-213ENST00000520571 PTGER2P43116 358 aa18.29■□□□□ 0.52
DENND3-213ENST00000520571 MCM10Q7L590 875 aa18.29■□□□□ 0.52
DENND3-213ENST00000520571 MRC1P22897 1456 aa18.28■□□□□ 0.52
DENND3-213ENST00000520571 WDR43Q15061 677 aaKnown RBP eCLIP18.28■□□□□ 0.52
DENND3-213ENST00000520571 AMIGO3Q86WK7 504 aa18.28■□□□□ 0.52
DENND3-213ENST00000520571 TTC5Q8N0Z6 440 aa18.28■□□□□ 0.52
DENND3-213ENST00000520571 FLAD1Q8NFF5 587 aa18.28■□□□□ 0.52
DENND3-213ENST00000520571 SLC16A10Q8TF71 515 aa18.28■□□□□ 0.52
DENND3-213ENST00000520571 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.27■□□□□ 0.52
DENND3-213ENST00000520571 DCTN1Q14203 1278 aa18.27■□□□□ 0.52
DENND3-213ENST00000520571 PLEKHF1Q96S99 279 aa18.27■□□□□ 0.52
DENND3-213ENST00000520571 ADAMTS7Q9UKP4 1686 aa18.27■□□□□ 0.52
DENND3-213ENST00000520571 POLD1P28340 1107 aa18.26■□□□□ 0.51
DENND3-213ENST00000520571 MSL1Q68DK7 614 aa18.26■□□□□ 0.51
DENND3-213ENST00000520571 UBR3Q6ZT12 1888 aa18.25■□□□□ 0.51
DENND3-213ENST00000520571 BTBD11A6QL63 1104 aa18.25■□□□□ 0.51
DENND3-213ENST00000520571 DNAJC10Q8IXB1 793 aa18.25■□□□□ 0.51
DENND3-213ENST00000520571 CCDC146Q8IYE0 955 aa18.25■□□□□ 0.51
DENND3-213ENST00000520571 RTCBQ9Y3I0 505 aaKnown RBP18.25■□□□□ 0.51
DENND3-213ENST00000520571 SSFA2P28290 1259 aa18.24■□□□□ 0.51
DENND3-213ENST00000520571 NFE2L2Q16236 605 aa18.24■□□□□ 0.51
DENND3-213ENST00000520571 ARXQ96QS3 562 aa18.24■□□□□ 0.51
DENND3-213ENST00000520571 ZNF831Q5JPB2 1677 aa18.23■□□□□ 0.51
DENND3-213ENST00000520571 CEMIPQ8WUJ3 1361 aa18.23■□□□□ 0.51
DENND3-213ENST00000520571 HTATSF1O43719 755 aaKnown RBP18.23■□□□□ 0.51
DENND3-213ENST00000520571 TRAPPC3LQ5T215 181 aa18.23■□□□□ 0.51
DENND3-213ENST00000520571 KLHL34Q8N239 644 aa18.23■□□□□ 0.51
DENND3-213ENST00000520571 DLG5Q8TDM6 1919 aa18.23■□□□□ 0.51
DENND3-213ENST00000520571 COL5A3P25940 1745 aaPredicted RBP18.23■□□□□ 0.51
DENND3-213ENST00000520571 CNTNAP4Q9C0A0 1308 aa18.23■□□□□ 0.51
DENND3-213ENST00000520571 ANP32CO43423 234 aa18.22■□□□□ 0.51
DENND3-213ENST00000520571 CRKLP46109 303 aaKnown RBP18.22■□□□□ 0.51
DENND3-213ENST00000520571 RC3H1Q5TC82 1133 aaKnown RBP18.22■□□□□ 0.51
DENND3-213ENST00000520571 ZNF790Q6PG37 636 aa18.22■□□□□ 0.51
DENND3-213ENST00000520571 SGIP1Q9BQI5 828 aa18.22■□□□□ 0.51
DENND3-213ENST00000520571 ADAMTS8Q9UP79 889 aa18.22■□□□□ 0.51
DENND3-213ENST00000520571 MYH14Q7Z406 1995 aaKnown RBP18.22■□□□□ 0.51
DENND3-213ENST00000520571 SIPA1L3O60292 1781 aaPredicted RBP18.22■□□□□ 0.51
DENND3-213ENST00000520571 TJP1Q07157 1748 aa18.21■□□□□ 0.51
DENND3-213ENST00000520571 KCNQ3O43525 872 aa18.21■□□□□ 0.51
DENND3-213ENST00000520571 ZNF496Q96IT1 587 aaPredicted RBP18.21■□□□□ 0.51
DENND3-213ENST00000520571 KCPQ6ZWJ8 1503 aa18.21■□□□□ 0.51
DENND3-213ENST00000520571 RPS6KA4O75676 772 aa18.2■□□□□ 0.5
DENND3-213ENST00000520571 RIPK4P57078 832 aa18.2■□□□□ 0.5
DENND3-213ENST00000520571 THUMPD2Q9BTF0 503 aaKnown RBP18.2■□□□□ 0.5
DENND3-213ENST00000520571 FHDC1Q9C0D6 1143 aaPredicted RBP18.2■□□□□ 0.5
DENND3-213ENST00000520571 MIS18AQ9NYP9 233 aa18.2■□□□□ 0.5
DENND3-213ENST00000520571 RRP7AQ9Y3A4 280 aaKnown RBP18.2■□□□□ 0.5
DENND3-213ENST00000520571 RFC4P35249 363 aa18.19■□□□□ 0.5
DENND3-213ENST00000520571 NEUROD2Q15784 382 aa18.19■□□□□ 0.5
DENND3-213ENST00000520571 VSIG10Q8N0Z9 540 aa18.19■□□□□ 0.5
DENND3-213ENST00000520571 ARHGEF1Q92888 912 aaKnown RBP18.19■□□□□ 0.5
DENND3-213ENST00000520571 FMNL2Q96PY5 1086 aa18.19■□□□□ 0.5
DENND3-213ENST00000520571 CCDC87Q9NVE4 849 aa18.19■□□□□ 0.5
DENND3-213ENST00000520571 CYP19A1P11511 503 aaPredicted RBP18.18■□□□□ 0.5
DENND3-213ENST00000520571 TAF7Q15545 349 aaPredicted RBP18.18■□□□□ 0.5
DENND3-213ENST00000520571 INTS5Q6P9B9 1019 aaKnown RBP18.18■□□□□ 0.5
DENND3-213ENST00000520571 UBR2Q8IWV8 1755 aa18.17■□□□□ 0.5
DENND3-213ENST00000520571 STARD3NLO95772 234 aa18.17■□□□□ 0.5
DENND3-213ENST00000520571 ADRA2BP18089 450 aa18.17■□□□□ 0.5
DENND3-213ENST00000520571 TMPOP42166 694 aaKnown RBP18.17■□□□□ 0.5
DENND3-213ENST00000520571 RUNDC1Q96C34 613 aa18.17■□□□□ 0.5
DENND3-213ENST00000520571 HEG1Q9ULI3 1381 aa18.17■□□□□ 0.5
DENND3-213ENST00000520571 CANXP27824 592 aaKnown RBP18.16■□□□□ 0.5
DENND3-213ENST00000520571 CCDC184Q52MB2 194 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms