RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 SMG6Q86US8 1419 aaKnown RBP6.88□□□□□ -1.31
SDC2-204ENST00000519914 IQGAP1P46940 1657 aa6.88□□□□□ -1.31
SDC2-204ENST00000519914 SLC24A1O60721 1099 aa6.87□□□□□ -1.31
SDC2-204ENST00000519914 BRD4O60885 1362 aaPredicted RBP6.87□□□□□ -1.31
SDC2-204ENST00000519914 CCDC184Q52MB2 194 aa6.87□□□□□ -1.31
SDC2-204ENST00000519914 EFCAB2Q5VUJ9 269 aa6.87□□□□□ -1.31
SDC2-204ENST00000519914 RNF123Q5XPI4 1314 aa6.87□□□□□ -1.31
SDC2-204ENST00000519914 TRIM46Q7Z4K8 759 aa6.87□□□□□ -1.31
SDC2-204ENST00000519914 MADDQ8WXG6 1647 aa6.87□□□□□ -1.31
SDC2-204ENST00000519914 TBC1D2Q9BYX2 928 aa6.87□□□□□ -1.31
SDC2-204ENST00000519914 WASHC2CQ9Y4E1 1318 aa6.87□□□□□ -1.31
SDC2-204ENST00000519914 SCAPERQ9BY12 1400 aa6.86□□□□□ -1.31
SDC2-204ENST00000519914 TRAPPC8Q9Y2L5 1435 aa6.86□□□□□ -1.31
SDC2-204ENST00000519914 VEGFBP49765 207 aa6.86□□□□□ -1.31
SDC2-204ENST00000519914 RALBP1Q15311 655 aa6.86□□□□□ -1.31
SDC2-204ENST00000519914 AMHR2Q16671 573 aa6.86□□□□□ -1.31
SDC2-204ENST00000519914 CSPP1Q1MSJ5 1256 aa6.86□□□□□ -1.31
SDC2-204ENST00000519914 CARD11Q9BXL7 1154 aa6.86□□□□□ -1.31
SDC2-204ENST00000519914 MRS2Q9HD23 443 aa6.86□□□□□ -1.31
SDC2-204ENST00000519914 LMTK2Q8IWU2 1503 aa6.85□□□□□ -1.31
SDC2-204ENST00000519914 PARD3Q8TEW0 1356 aa6.85□□□□□ -1.31
SDC2-204ENST00000519914 INSM1Q01101 510 aaPredicted RBP6.85□□□□□ -1.31
SDC2-204ENST00000519914 ZNF511Q8NB15 262 aa6.85□□□□□ -1.31
SDC2-204ENST00000519914 MROH1Q8NDA8 1641 aa6.85□□□□□ -1.31
SDC2-204ENST00000519914 ATP7AQ04656 1500 aa6.85□□□□□ -1.31
SDC2-204ENST00000519914 SPDYE5A6NIY4 337 aa6.84□□□□□ -1.31
SDC2-204ENST00000519914 WIPF1O43516 503 aa6.84□□□□□ -1.31
SDC2-204ENST00000519914 ARID5BQ14865 1188 aa6.84□□□□□ -1.31
SDC2-204ENST00000519914 RSBN1LQ6PCB5 846 aaPredicted RBP6.84□□□□□ -1.31
SDC2-204ENST00000519914 TSC1Q92574 1164 aa6.84□□□□□ -1.31
SDC2-204ENST00000519914 IFT172Q9UG01 1749 aa6.84□□□□□ -1.32
SDC2-204ENST00000519914 MYBBP1AQ9BQG0 1328 aaKnown RBP6.83□□□□□ -1.32
SDC2-204ENST00000519914 CLTCL1P53675 1640 aa6.83□□□□□ -1.32
SDC2-204ENST00000519914 ST20-MTHFSA0A0A6YYL1 179 aa6.83□□□□□ -1.32
SDC2-204ENST00000519914 CFAP99D6REC4 459 aa6.83□□□□□ -1.32
SDC2-204ENST00000519914 NNTQ13423 1086 aa6.83□□□□□ -1.32
SDC2-204ENST00000519914 PARP9Q8IXQ6 854 aa6.83□□□□□ -1.32
SDC2-204ENST00000519914 CABLES1Q8TDN4 633 aa6.83□□□□□ -1.32
SDC2-204ENST00000519914 DCAF11Q8TEB1 546 aa6.83□□□□□ -1.32
SDC2-204ENST00000519914 PNISRQ8TF01 805 aaKnown RBP6.83□□□□□ -1.32
SDC2-204ENST00000519914 SLC16A10Q8TF71 515 aa6.83□□□□□ -1.32
SDC2-204ENST00000519914 ZFP42Q96MM3 310 aa6.83□□□□□ -1.32
SDC2-204ENST00000519914 CFAP74Q9C0B2 1584 aa6.83□□□□□ -1.32
SDC2-204ENST00000519914 PLEKHG3A1L390 1219 aa6.82□□□□□ -1.32
SDC2-204ENST00000519914 TRIM66O15016 1216 aa6.82□□□□□ -1.32
SDC2-204ENST00000519914 PER1O15534 1290 aaPredicted RBP6.82□□□□□ -1.32
SDC2-204ENST00000519914 VARSP26640 1264 aaKnown RBP6.82□□□□□ -1.32
SDC2-204ENST00000519914 FOXJ1Q92949 421 aa6.82□□□□□ -1.32
SDC2-204ENST00000519914 TESK2Q96S53 571 aa6.82□□□□□ -1.32
SDC2-204ENST00000519914 ANP32EQ9BTT0 268 aa6.82□□□□□ -1.32
SDC2-204ENST00000519914 PPP4R2Q9NY27 417 aa6.82□□□□□ -1.32
SDC2-204ENST00000519914 MAP10Q9P2G4 905 aa6.82□□□□□ -1.32
SDC2-204ENST00000519914 NXF1Q9UBU9 619 aaKnown RBP6.82□□□□□ -1.32
SDC2-204ENST00000519914 STK17AQ9UEE5 414 aa6.82□□□□□ -1.32
SDC2-204ENST00000519914 MYOM2P54296 1465 aa6.82□□□□□ -1.32
SDC2-204ENST00000519914 SYNMO15061 1565 aa6.82□□□□□ -1.32
SDC2-204ENST00000519914 KIDINS220Q9ULH0 1771 aa6.82□□□□□ -1.32
SDC2-204ENST00000519914 WDR4P57081 412 aaKnown RBP6.81□□□□□ -1.32
SDC2-204ENST00000519914 AGERQ15109 404 aa6.81□□□□□ -1.32
SDC2-204ENST00000519914 DESI1Q6ICB0 168 aa6.81□□□□□ -1.32
SDC2-204ENST00000519914 LYPD8Q6UX82 237 aa6.81□□□□□ -1.32
SDC2-204ENST00000519914 RIC3Q7Z5B4 369 aa6.81□□□□□ -1.32
SDC2-204ENST00000519914 NUDCQ9Y266 331 aa6.81□□□□□ -1.32
SDC2-204ENST00000519914 FANCAO15360 1455 aa6.81□□□□□ -1.32
SDC2-204ENST00000519914 NRXN1Q9ULB1 1477 aa6.81□□□□□ -1.32
SDC2-204ENST00000519914 MYO3AQ8NEV4 1616 aa6.81□□□□□ -1.32
SDC2-204ENST00000519914 EFCAB6Q5THR3 1501 aa6.81□□□□□ -1.32
SDC2-204ENST00000519914 SPAG9O60271 1321 aaKnown RBP6.81□□□□□ -1.32
SDC2-204ENST00000519914 SCAF11Q99590 1463 aaKnown RBP6.8□□□□□ -1.32
SDC2-204ENST00000519914 KIF1BO60333 1816 aa6.8□□□□□ -1.32
SDC2-204ENST00000519914 SOBPA7XYQ1 873 aa6.8□□□□□ -1.32
SDC2-204ENST00000519914 SPTLC1O15269 473 aa6.8□□□□□ -1.32
SDC2-204ENST00000519914 GMPRP36959 345 aa6.8□□□□□ -1.32
SDC2-204ENST00000519914 DIXDC1Q155Q3 683 aa6.8□□□□□ -1.32
SDC2-204ENST00000519914 PURBQ96QR8 312 aaKnown RBP6.8□□□□□ -1.32
SDC2-204ENST00000519914 ZBTB3Q9H5J0 574 aa6.8□□□□□ -1.32
SDC2-204ENST00000519914 MAP3K4Q9Y6R4 1608 aa6.8□□□□□ -1.32
SDC2-204ENST00000519914 BLMP54132 1417 aaPredicted RBP6.8□□□□□ -1.32
SDC2-204ENST00000519914 NPC1L1Q9UHC9 1359 aa6.8□□□□□ -1.32
SDC2-204ENST00000519914 MYOM1P52179 1685 aa6.8□□□□□ -1.32
SDC2-204ENST00000519914 NUTM2BA6NNL0 878 aaPredicted RBP6.79□□□□□ -1.32
SDC2-204ENST00000519914 NUTM2EB1AL46 878 aaPredicted RBP6.79□□□□□ -1.32
SDC2-204ENST00000519914 NUTM2DQ5VT03 806 aaPredicted RBP6.79□□□□□ -1.32
SDC2-204ENST00000519914 NLRP13Q86W25 1043 aa6.79□□□□□ -1.32
SDC2-204ENST00000519914 NUTM2AQ8IVF1 878 aaPredicted RBP6.79□□□□□ -1.32
SDC2-204ENST00000519914 FAM9BQ8IZU0 186 aa6.79□□□□□ -1.32
SDC2-204ENST00000519914 FAM174AQ8TBP5 190 aa6.79□□□□□ -1.32
SDC2-204ENST00000519914 BCANQ96GW7 911 aa6.79□□□□□ -1.32
SDC2-204ENST00000519914 ADGRL1O94910 1474 aa6.79□□□□□ -1.32
SDC2-204ENST00000519914 SETBP1Q9Y6X0 1596 aa6.78□□□□□ -1.32
SDC2-204ENST00000519914 ASXL2Q76L83 1435 aa6.78□□□□□ -1.32
SDC2-204ENST00000519914 TIMP2P16035 220 aa6.78□□□□□ -1.32
SDC2-204ENST00000519914 SCARF1Q14162 830 aa6.78□□□□□ -1.32
SDC2-204ENST00000519914 ZNF326Q5BKZ1 582 aaKnown RBP6.78□□□□□ -1.32
SDC2-204ENST00000519914 MRPL14Q6P1L8 145 aaKnown RBP6.78□□□□□ -1.32
SDC2-204ENST00000519914 AK7Q96M32 723 aa6.78□□□□□ -1.32
SDC2-204ENST00000519914 ADGRB3O60242 1522 aa6.78□□□□□ -1.32
SDC2-204ENST00000519914 DISP3Q9P2K9 1392 aa6.78□□□□□ -1.32
SDC2-204ENST00000519914 ZNF518AQ6AHZ1 1483 aa6.78□□□□□ -1.32
SDC2-204ENST00000519914 MLH3Q9UHC1 1453 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms