RNA–Protein interactions for RNA: ENST00000519486.5

SLIT3-205, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 4,228 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-205ENST00000519486 ALDH1L2Q3SY69 923 aa9.4□□□□□ -0.9
SLIT3-205ENST00000519486 PLCD3Q8N3E9 789 aa9.4□□□□□ -0.9
SLIT3-205ENST00000519486 PHACTR3Q96KR7 559 aa9.4□□□□□ -0.9
SLIT3-205ENST00000519486 CCDC66A2RUB6 948 aa9.4□□□□□ -0.91
SLIT3-205ENST00000519486 DYNC1I1O14576 645 aa9.4□□□□□ -0.91
SLIT3-205ENST00000519486 IFNL2Q8IZJ0 200 aa9.4□□□□□ -0.91
SLIT3-205ENST00000519486 DDX17Q92841 729 aaKnown RBP9.4□□□□□ -0.91
SLIT3-205ENST00000519486 POLKQ9UBT6 870 aa9.4□□□□□ -0.91
SLIT3-205ENST00000519486 CCNL1Q9UK58 526 aaPredicted RBP9.4□□□□□ -0.91
SLIT3-205ENST00000519486 NCOA3Q9Y6Q9 1424 aa9.4□□□□□ -0.91
SLIT3-205ENST00000519486 CBX1P83916 185 aa9.39□□□□□ -0.91
SLIT3-205ENST00000519486 ZNF428Q96B54 188 aa9.39□□□□□ -0.91
SLIT3-205ENST00000519486 CHMP3Q9Y3E7 222 aa9.39□□□□□ -0.91
SLIT3-205ENST00000519486 MCTP1Q6DN14 999 aa9.39□□□□□ -0.91
SLIT3-205ENST00000519486 TSPYL6Q8N831 410 aa9.39□□□□□ -0.91
SLIT3-205ENST00000519486 MBIPQ9NS73 344 aa9.39□□□□□ -0.91
SLIT3-205ENST00000519486 TAOK2Q9UL54 1235 aa9.39□□□□□ -0.91
SLIT3-205ENST00000519486 THRAP3Q9Y2W1 955 aaKnown RBP9.39□□□□□ -0.91
SLIT3-205ENST00000519486 RTCBQ9Y3I0 505 aaKnown RBP9.39□□□□□ -0.91
SLIT3-205ENST00000519486 OFD1O75665 1012 aa9.39□□□□□ -0.91
SLIT3-205ENST00000519486 CWC22Q9HCG8 908 aaKnown RBP9.39□□□□□ -0.91
SLIT3-205ENST00000519486 CCDC87Q9NVE4 849 aa9.39□□□□□ -0.91
SLIT3-205ENST00000519486 CGNQ9P2M7 1197 aaKnown RBP9.39□□□□□ -0.91
SLIT3-205ENST00000519486 MAP3K4Q9Y6R4 1608 aa9.39□□□□□ -0.91
SLIT3-205ENST00000519486 APPP05067 770 aa9.39□□□□□ -0.91
SLIT3-205ENST00000519486 HMGN5P82970 282 aaKnown RBP9.39□□□□□ -0.91
SLIT3-205ENST00000519486 CROCC2H7BZ55 1655 aa9.38□□□□□ -0.91
SLIT3-205ENST00000519486 CEP170BQ9Y4F5 1589 aaPredicted RBP9.38□□□□□ -0.91
SLIT3-205ENST00000519486 CLEC11AQ9Y240 323 aa9.38□□□□□ -0.91
SLIT3-205ENST00000519486 TRPM1Q7Z4N2 1603 aa9.38□□□□□ -0.91
SLIT3-205ENST00000519486 SMARCA5O60264 1052 aaPredicted RBP9.38□□□□□ -0.91
SLIT3-205ENST00000519486 PHF14O94880 888 aa9.38□□□□□ -0.91
SLIT3-205ENST00000519486 HDAC1Q13547 482 aaPredicted RBP9.38□□□□□ -0.91
SLIT3-205ENST00000519486 IFT57Q9NWB7 429 aa9.38□□□□□ -0.91
SLIT3-205ENST00000519486 TRIM35Q9UPQ4 493 aa9.38□□□□□ -0.91
SLIT3-205ENST00000519486 YTHDC2Q9H6S0 1430 aaKnown RBP9.38□□□□□ -0.91
SLIT3-205ENST00000519486 LETM1O95202 739 aaPredicted RBP9.38□□□□□ -0.91
SLIT3-205ENST00000519486 FBXW7Q969H0 707 aa9.38□□□□□ -0.91
SLIT3-205ENST00000519486 FAM135BQ49AJ0 1406 aa9.37□□□□□ -0.91
SLIT3-205ENST00000519486 PPP4R3BQ5MIZ7 849 aa9.37□□□□□ -0.91
SLIT3-205ENST00000519486 GTPBP4Q9BZE4 634 aaKnown RBP9.37□□□□□ -0.91
SLIT3-205ENST00000519486 GRIN3BO60391 1043 aa9.37□□□□□ -0.91
SLIT3-205ENST00000519486 CCDC39Q9UFE4 941 aa9.37□□□□□ -0.91
SLIT3-205ENST00000519486 CDC42BPBQ9Y5S2 1711 aa9.37□□□□□ -0.91
SLIT3-205ENST00000519486 IL16Q14005 1332 aa9.37□□□□□ -0.91
SLIT3-205ENST00000519486 F6X3S4 739 aa9.37□□□□□ -0.91
SLIT3-205ENST00000519486 K7ELQ4 463 aaPredicted RBP9.37□□□□□ -0.91
SLIT3-205ENST00000519486 SASS6Q6UVJ0 657 aa9.37□□□□□ -0.91
SLIT3-205ENST00000519486 C8orf58Q8NAV2 365 aa9.37□□□□□ -0.91
SLIT3-205ENST00000519486 KIF20AO95235 890 aa9.36□□□□□ -0.91
SLIT3-205ENST00000519486 NEK4P51957 841 aa9.36□□□□□ -0.91
SLIT3-205ENST00000519486 ST5P78524 1137 aa9.36□□□□□ -0.91
SLIT3-205ENST00000519486 DIP2CQ9Y2E4 1556 aa9.36□□□□□ -0.91
SLIT3-205ENST00000519486 ABCC3O15438 1527 aa9.36□□□□□ -0.91
SLIT3-205ENST00000519486 TTC21BQ7Z4L5 1316 aa9.36□□□□□ -0.91
SLIT3-205ENST00000519486 ADGRL3Q9HAR2 1447 aa9.36□□□□□ -0.91
SLIT3-205ENST00000519486 ZBTB40Q9NUA8 1239 aa9.36□□□□□ -0.91
SLIT3-205ENST00000519486 EXOC6BQ9Y2D4 811 aa9.36□□□□□ -0.91
SLIT3-205ENST00000519486 AEBP1Q8IUX7 1158 aa9.36□□□□□ -0.91
SLIT3-205ENST00000519486 PUS7Q96PZ0 661 aaKnown RBP9.36□□□□□ -0.91
SLIT3-205ENST00000519486 VPS72Q15906 364 aa9.36□□□□□ -0.91
SLIT3-205ENST00000519486 KRT24Q2M2I5 525 aa9.36□□□□□ -0.91
SLIT3-205ENST00000519486 GORABQ5T7V8 394 aa9.36□□□□□ -0.91
SLIT3-205ENST00000519486 NOL10Q9BSC4 688 aaKnown RBP9.36□□□□□ -0.91
SLIT3-205ENST00000519486 GOLGA6L4A6NEF3 574 aa9.35□□□□□ -0.91
SLIT3-205ENST00000519486 VAMP4O75379 141 aa9.35□□□□□ -0.91
SLIT3-205ENST00000519486 TERF1P54274 439 aa9.35□□□□□ -0.91
SLIT3-205ENST00000519486 NUCB2P80303 420 aa9.35□□□□□ -0.91
SLIT3-205ENST00000519486 NUCB1Q02818 461 aa9.35□□□□□ -0.91
SLIT3-205ENST00000519486 TBC1D9Q6ZT07 1266 aa9.35□□□□□ -0.91
SLIT3-205ENST00000519486 FER1L4A9Z1Z3 1794 aa9.35□□□□□ -0.91
SLIT3-205ENST00000519486 UBTFL1P0CB47 393 aaPredicted RBP9.35□□□□□ -0.91
SLIT3-205ENST00000519486 LMOD1P29536 600 aaPredicted RBP9.35□□□□□ -0.91
SLIT3-205ENST00000519486 RABEP1Q15276 862 aa9.35□□□□□ -0.91
SLIT3-205ENST00000519486 DPY19L2Q6NUT2 758 aa9.35□□□□□ -0.91
SLIT3-205ENST00000519486 ZNF622Q969S3 477 aaKnown RBP eCLIP9.35□□□□□ -0.91
SLIT3-205ENST00000519486 CCDC94Q9BW85 323 aaPredicted RBP9.35□□□□□ -0.91
SLIT3-205ENST00000519486 PSDA5PKW4 1024 aaPredicted RBP9.35□□□□□ -0.91
SLIT3-205ENST00000519486 HSP90AB2PQ58FF8 381 aa9.35□□□□□ -0.91
SLIT3-205ENST00000519486 SMC5Q8IY18 1101 aa9.35□□□□□ -0.91
SLIT3-205ENST00000519486 IPO4Q8TEX9 1081 aaKnown RBP9.35□□□□□ -0.91
SLIT3-205ENST00000519486 TRIM34Q9BYJ4 488 aa9.35□□□□□ -0.91
SLIT3-205ENST00000519486 C9orf78Q9NZ63 289 aaPredicted RBP9.35□□□□□ -0.91
SLIT3-205ENST00000519486 SPATA31A3Q5VYP0 1347 aa9.34□□□□□ -0.91
SLIT3-205ENST00000519486 PTCD1O75127 700 aaKnown RBP9.34□□□□□ -0.91
SLIT3-205ENST00000519486 SURF6O75683 361 aaKnown RBP9.34□□□□□ -0.91
SLIT3-205ENST00000519486 GNAI2P04899 355 aa9.34□□□□□ -0.91
SLIT3-205ENST00000519486 BMP2KLQ5H9B9 411 aa9.34□□□□□ -0.91
SLIT3-205ENST00000519486 CAVIN1Q6NZI2 390 aaKnown RBP9.34□□□□□ -0.91
SLIT3-205ENST00000519486 BICDL1Q6ZP65 573 aa9.34□□□□□ -0.91
SLIT3-205ENST00000519486 VGLL3A8MV65 326 aa9.34□□□□□ -0.91
SLIT3-205ENST00000519486 TRAPPC3LQ5T215 181 aa9.34□□□□□ -0.91
SLIT3-205ENST00000519486 RPAP2Q8IXW5 612 aaPredicted RBP9.34□□□□□ -0.91
SLIT3-205ENST00000519486 IQGAP3Q86VI3 1631 aa9.34□□□□□ -0.91
SLIT3-205ENST00000519486 ATP6V1AP38606 617 aa9.34□□□□□ -0.91
SLIT3-205ENST00000519486 CCDC30Q5VVM6 783 aa9.34□□□□□ -0.91
SLIT3-205ENST00000519486 VPS37DQ86XT2 251 aa9.34□□□□□ -0.91
SLIT3-205ENST00000519486 JDP2Q8WYK2 163 aa9.34□□□□□ -0.91
SLIT3-205ENST00000519486 SBNO2Q9Y2G9 1366 aa9.34□□□□□ -0.92
SLIT3-205ENST00000519486 GNAI3P08754 354 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms