RNA–Protein interactions for RNA: ENST00000519177.5

SNTB1-203, Transcript of syntrophin beta 1, humanhuman

TSL 1 (best)

Gene SNTB1, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-203ENST00000519177 BMP2KLQ5H9B9 411 aa23.34■■□□□ 1.33
SNTB1-203ENST00000519177 TNS3Q68CZ2 1445 aa23.34■■□□□ 1.33
SNTB1-203ENST00000519177 ZC3H6P61129 1189 aaKnown RBP23.34■■□□□ 1.33
SNTB1-203ENST00000519177 C1orf141Q5JVX7 400 aa23.34■■□□□ 1.33
SNTB1-203ENST00000519177 DDX17Q92841 729 aaKnown RBP23.34■■□□□ 1.33
SNTB1-203ENST00000519177 CHMP4AQ9BY43 222 aa23.34■■□□□ 1.33
SNTB1-203ENST00000519177 PXDNQ92626 1479 aa23.34■■□□□ 1.33
SNTB1-203ENST00000519177 TEFQ10587 303 aa23.33■■□□□ 1.33
SNTB1-203ENST00000519177 SLC4A10Q6U841 1118 aa23.33■■□□□ 1.33
SNTB1-203ENST00000519177 RNMTO43148 476 aaKnown RBP23.32■■□□□ 1.32
SNTB1-203ENST00000519177 HDGFL1Q5TGJ6 251 aa23.32■■□□□ 1.32
SNTB1-203ENST00000519177 XIRP1Q702N8 1843 aaKnown RBP23.32■■□□□ 1.32
SNTB1-203ENST00000519177 N4BP2Q86UW6 1770 aaPredicted RBP23.32■■□□□ 1.32
SNTB1-203ENST00000519177 PXDNLA1KZ92 1463 aa23.32■■□□□ 1.32
SNTB1-203ENST00000519177 FKBP5Q13451 457 aaPredicted RBP23.32■■□□□ 1.32
SNTB1-203ENST00000519177 ABCC6O95255 1503 aa23.32■■□□□ 1.32
SNTB1-203ENST00000519177 MPRIPQ6WCQ1 1025 aa23.31■■□□□ 1.32
SNTB1-203ENST00000519177 NECTIN2Q92692 538 aa23.31■■□□□ 1.32
SNTB1-203ENST00000519177 COL18A1P39060 1754 aa23.31■■□□□ 1.32
SNTB1-203ENST00000519177 BTBD11A6QL63 1104 aa23.3■■□□□ 1.32
SNTB1-203ENST00000519177 SLC4A3P48751 1232 aa23.3■■□□□ 1.32
SNTB1-203ENST00000519177 SPATA31A3Q5VYP0 1347 aa23.3■■□□□ 1.32
SNTB1-203ENST00000519177 ADAMTS7Q9UKP4 1686 aa23.29■■□□□ 1.32
SNTB1-203ENST00000519177 STRCQ7RTU9 1775 aa23.29■■□□□ 1.32
SNTB1-203ENST00000519177 CRYBG1Q9Y4K1 1723 aa23.29■■□□□ 1.32
SNTB1-203ENST00000519177 HMMRO75330 724 aa23.28■■□□□ 1.32
SNTB1-203ENST00000519177 GNAI2P04899 355 aa23.27■■□□□ 1.32
SNTB1-203ENST00000519177 GNAI3P08754 354 aa23.27■■□□□ 1.32
SNTB1-203ENST00000519177 PLEKHG2Q9H7P9 1386 aa23.26■■□□□ 1.31
SNTB1-203ENST00000519177 KCNQ3O43525 872 aa23.26■■□□□ 1.31
SNTB1-203ENST00000519177 BECN1Q14457 450 aa23.26■■□□□ 1.31
SNTB1-203ENST00000519177 NBR1Q14596 966 aa23.26■■□□□ 1.31
SNTB1-203ENST00000519177 SIPA1L3O60292 1781 aaPredicted RBP23.26■■□□□ 1.31
SNTB1-203ENST00000519177 KDM4FA0A1W2PPD8 638 aa23.25■■□□□ 1.31
SNTB1-203ENST00000519177 MFAP1P55081 439 aaKnown RBP23.25■■□□□ 1.31
SNTB1-203ENST00000519177 C22orf23Q9BZE7 217 aa23.25■■□□□ 1.31
SNTB1-203ENST00000519177 CPDO75976 1380 aa23.24■■□□□ 1.31
SNTB1-203ENST00000519177 PLEKHM2Q8IWE5 1019 aa23.24■■□□□ 1.31
SNTB1-203ENST00000519177 RAPGEF4Q8WZA2 1011 aa23.24■■□□□ 1.31
SNTB1-203ENST00000519177 BRINP3Q76B58 766 aa23.23■■□□□ 1.31
SNTB1-203ENST00000519177 NLRP2Q9NX02 1062 aa23.23■■□□□ 1.31
SNTB1-203ENST00000519177 HEG1Q9ULI3 1381 aa23.23■■□□□ 1.31
SNTB1-203ENST00000519177 EIF2S2P20042 333 aaKnown RBP23.23■■□□□ 1.31
SNTB1-203ENST00000519177 CABLES1Q8TDN4 633 aa23.23■■□□□ 1.31
SNTB1-203ENST00000519177 PHAXQ9H814 394 aaKnown RBP23.23■■□□□ 1.31
SNTB1-203ENST00000519177 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.23■■□□□ 1.313e-7■■□□□ 11.6
SNTB1-203ENST00000519177 TATP17735 454 aaPredicted RBP23.21■■□□□ 1.31
SNTB1-203ENST00000519177 CHPF2Q9P2E5 772 aa23.21■■□□□ 1.31
SNTB1-203ENST00000519177 SPG7Q9UQ90 795 aa23.2■■□□□ 1.3
SNTB1-203ENST00000519177 GIGYF1O75420 1035 aaPredicted RBP23.19■■□□□ 1.3
SNTB1-203ENST00000519177 CSB-PGBD3P0DP91 1061 aa23.18■■□□□ 1.3
SNTB1-203ENST00000519177 ATP8B2P98198 1209 aa23.18■■□□□ 1.3
SNTB1-203ENST00000519177 USP44Q9H0E7 712 aa23.18■■□□□ 1.3
SNTB1-203ENST00000519177 MEGF6O75095 1541 aa23.18■■□□□ 1.3
SNTB1-203ENST00000519177 SCN11AQ9UI33 1791 aa23.18■■□□□ 1.3
SNTB1-203ENST00000519177 GSPT1P15170 499 aaKnown RBP23.18■■□□□ 1.3
SNTB1-203ENST00000519177 TTC22Q5TAA0 569 aa23.18■■□□□ 1.3
SNTB1-203ENST00000519177 USP35Q9P2H5 1018 aa23.18■■□□□ 1.3
SNTB1-203ENST00000519177 DBF4Q9UBU7 674 aaPredicted RBP23.18■■□□□ 1.3
SNTB1-203ENST00000519177 PHKG2P15735 406 aa23.17■■□□□ 1.3
SNTB1-203ENST00000519177 RBM25P49756 843 aaKnown RBP23.17■■□□□ 1.3
SNTB1-203ENST00000519177 CHRNA2Q15822 529 aa23.17■■□□□ 1.3
SNTB1-203ENST00000519177 C16orf71Q8IYS4 520 aaPredicted RBP23.17■■□□□ 1.3
SNTB1-203ENST00000519177 RTL5Q5HYW3 569 aaPredicted RBP23.16■■□□□ 1.3
SNTB1-203ENST00000519177 TBC1D9Q6ZT07 1266 aa23.16■■□□□ 1.3
SNTB1-203ENST00000519177 SRCIN1Q9C0H9 1055 aa23.16■■□□□ 1.3
SNTB1-203ENST00000519177 SOS2Q07890 1332 aaPredicted RBP23.16■■□□□ 1.3
SNTB1-203ENST00000519177 KDM6AO15550 1401 aaPredicted RBP23.16■■□□□ 1.3
SNTB1-203ENST00000519177 CDC45O75419 566 aa23.16■■□□□ 1.3
SNTB1-203ENST00000519177 SLAIN2Q9P270 581 aa23.16■■□□□ 1.3
SNTB1-203ENST00000519177 ZNF335Q9H4Z2 1342 aaPredicted RBP23.15■■□□□ 1.3
SNTB1-203ENST00000519177 EIF5BO60841 1220 aaKnown RBP23.15■■□□□ 1.3
SNTB1-203ENST00000519177 DNAAF4Q8WXU2 420 aa23.15■■□□□ 1.3
SNTB1-203ENST00000519177 SMARCA5O60264 1052 aaPredicted RBP23.14■■□□□ 1.3
SNTB1-203ENST00000519177 UBTFL1P0CB47 393 aaPredicted RBP23.14■■□□□ 1.3
SNTB1-203ENST00000519177 IFNL2Q8IZJ0 200 aa23.14■■□□□ 1.3
SNTB1-203ENST00000519177 SLC52A2Q9HAB3 445 aa23.14■■□□□ 1.3
SNTB1-203ENST00000519177 LRRFIP2Q9Y608 721 aaKnown RBP23.14■■□□□ 1.3
SNTB1-203ENST00000519177 PKD1L3Q7Z443 1732 aa23.14■■□□□ 1.29
SNTB1-203ENST00000519177 TBC1D2Q9BYX2 928 aa23.14■■□□□ 1.29
SNTB1-203ENST00000519177 PI4KAP2A4QPH2 592 aa23.13■■□□□ 1.29
SNTB1-203ENST00000519177 BEND3Q5T5X7 828 aa23.13■■□□□ 1.29
SNTB1-203ENST00000519177 PI4KAP1Q8N8J0 262 aa23.13■■□□□ 1.29
SNTB1-203ENST00000519177 OTUD7AQ8TE49 926 aaPredicted RBP23.13■■□□□ 1.29
SNTB1-203ENST00000519177 PNMA6EA0A0J9YXQ4 647 aa23.12■■□□□ 1.29
SNTB1-203ENST00000519177 ADCY9O60503 1353 aa23.12■■□□□ 1.29
SNTB1-203ENST00000519177 APBB1O00213 710 aa23.12■■□□□ 1.29
SNTB1-203ENST00000519177 OSBPL3Q9H4L5 887 aa23.12■■□□□ 1.29
SNTB1-203ENST00000519177 MRC1P22897 1456 aa23.11■■□□□ 1.29
SNTB1-203ENST00000519177 ZNF790Q6PG37 636 aa23.1■■□□□ 1.29
SNTB1-203ENST00000519177 IBTKQ9P2D0 1353 aaPredicted RBP23.1■■□□□ 1.29
SNTB1-203ENST00000519177 ANXA1P04083 346 aa23.1■■□□□ 1.29
SNTB1-203ENST00000519177 DCAF5Q96JK2 942 aa23.1■■□□□ 1.29
SNTB1-203ENST00000519177 HYPKQ9NX55 129 aa23.1■■□□□ 1.29
SNTB1-203ENST00000519177 SSH3Q8TE77 659 aa23.09■■□□□ 1.29
SNTB1-203ENST00000519177 LRRCC1Q9C099 1032 aa23.09■■□□□ 1.29
SNTB1-203ENST00000519177 EXOC6BQ9Y2D4 811 aa23.09■■□□□ 1.29
SNTB1-203ENST00000519177 HSP90AB1P08238 724 aaKnown RBP23.09■■□□□ 1.29
SNTB1-203ENST00000519177 PRAMEF22A3QJZ6 481 aa23.08■■□□□ 1.29
SNTB1-203ENST00000519177 CYP27B1O15528 508 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms