RNA–Protein interactions for RNA: ENST00000518910.5

CTNNA1-211, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-211ENST00000518910 RBM42Q9BTD8 480 aaKnown RBP16.23■□□□□ 0.19
CTNNA1-211ENST00000518910 SLC39A6Q13433 755 aa16.22■□□□□ 0.19
CTNNA1-211ENST00000518910 R3HDM1Q15032 1099 aaKnown RBP16.22■□□□□ 0.19
CTNNA1-211ENST00000518910 PROM2Q8N271 834 aa16.22■□□□□ 0.19
CTNNA1-211ENST00000518910 RTF1Q92541 710 aaKnown RBP16.22■□□□□ 0.19
CTNNA1-211ENST00000518910 PLEKHF1Q96S99 279 aa16.22■□□□□ 0.19
CTNNA1-211ENST00000518910 ADAMTS7Q9UKP4 1686 aa16.21■□□□□ 0.19
CTNNA1-211ENST00000518910 PTCD1O75127 700 aaKnown RBP16.21■□□□□ 0.19
CTNNA1-211ENST00000518910 ANO8Q9HCE9 1232 aaPredicted RBP16.21■□□□□ 0.19
CTNNA1-211ENST00000518910 CCNL1Q9UK58 526 aaPredicted RBP16.21■□□□□ 0.19
CTNNA1-211ENST00000518910 TEFQ10587 303 aa16.2■□□□□ 0.18
CTNNA1-211ENST00000518910 IL17REQ8NFR9 667 aa16.2■□□□□ 0.18
CTNNA1-211ENST00000518910 ATG3Q9NT62 314 aa16.2■□□□□ 0.18
CTNNA1-211ENST00000518910 LRRC4BQ9NT99 713 aa16.2■□□□□ 0.18
CTNNA1-211ENST00000518910 SALL2Q9Y467 1007 aaPredicted RBP16.2■□□□□ 0.18
CTNNA1-211ENST00000518910 PAPPAQ13219 1627 aa16.19■□□□□ 0.18
CTNNA1-211ENST00000518910 ERVV-2B6SEH9 535 aa16.19■□□□□ 0.18
CTNNA1-211ENST00000518910 PLSCR1O15162 318 aa16.19■□□□□ 0.18
CTNNA1-211ENST00000518910 NFE2L2Q16236 605 aa16.19■□□□□ 0.18
CTNNA1-211ENST00000518910 PNNQ9H307 717 aaKnown RBP16.19■□□□□ 0.18
CTNNA1-211ENST00000518910 SLC52A2Q9HAB3 445 aa16.19■□□□□ 0.18
CTNNA1-211ENST00000518910 RIPK4P57078 832 aa16.18■□□□□ 0.18
CTNNA1-211ENST00000518910 SMIM5Q71RC9 77 aa16.18■□□□□ 0.18
CTNNA1-211ENST00000518910 MIER1Q8N108 512 aa16.18■□□□□ 0.18
CTNNA1-211ENST00000518910 MRC1P22897 1456 aa16.17■□□□□ 0.18
CTNNA1-211ENST00000518910 TJP1Q07157 1748 aa16.17■□□□□ 0.18
CTNNA1-211ENST00000518910 PLEKHG2Q9H7P9 1386 aa16.17■□□□□ 0.18
CTNNA1-211ENST00000518910 APAF1O14727 1248 aa16.17■□□□□ 0.18
CTNNA1-211ENST00000518910 RUNDC1Q96C34 613 aa16.17■□□□□ 0.18
CTNNA1-211ENST00000518910 MIS18AQ9NYP9 233 aa16.17■□□□□ 0.18
CTNNA1-211ENST00000518910 UBR2Q8IWV8 1755 aa16.16■□□□□ 0.18
CTNNA1-211ENST00000518910 TMPOP42166 694 aaKnown RBP16.16■□□□□ 0.18
CTNNA1-211ENST00000518910 ZNF827Q17R98 1081 aa16.16■□□□□ 0.18
CTNNA1-211ENST00000518910 NBPF14Q5TI25 921 aa16.16■□□□□ 0.18
CTNNA1-211ENST00000518910 SMARCC1Q92922 1105 aaPredicted RBP16.16■□□□□ 0.18
CTNNA1-211ENST00000518910 LAS1LQ9Y4W2 734 aaKnown RBP16.16■□□□□ 0.18
CTNNA1-211ENST00000518910 MYH14Q7Z406 1995 aaKnown RBP16.16■□□□□ 0.18
CTNNA1-211ENST00000518910 C4BP0C0L5 1744 aa16.16■□□□□ 0.18
CTNNA1-211ENST00000518910 LOC102724428A0A0B4J2F2 783 aa16.15■□□□□ 0.18
CTNNA1-211ENST00000518910 KCNQ3O43525 872 aa16.15■□□□□ 0.18
CTNNA1-211ENST00000518910 COL5A3P25940 1745 aaPredicted RBP16.15■□□□□ 0.18
CTNNA1-211ENST00000518910 ATP6V1AP38606 617 aa16.15■□□□□ 0.18
CTNNA1-211ENST00000518910 SIK1P57059 783 aa16.15■□□□□ 0.18
CTNNA1-211ENST00000518910 PNISRQ8TF01 805 aaKnown RBP16.15■□□□□ 0.18
CTNNA1-211ENST00000518910 STK32BQ9NY57 414 aa16.15■□□□□ 0.18
CTNNA1-211ENST00000518910 MSH5O43196 834 aa16.14■□□□□ 0.17
CTNNA1-211ENST00000518910 PHF14O94880 888 aa16.14■□□□□ 0.17
CTNNA1-211ENST00000518910 PDGFDQ9GZP0 370 aaPredicted RBP16.14■□□□□ 0.17
CTNNA1-211ENST00000518910 UBR3Q6ZT12 1888 aa16.14■□□□□ 0.17
CTNNA1-211ENST00000518910 KDM3BQ7LBC6 1761 aa16.13■□□□□ 0.17
CTNNA1-211ENST00000518910 BTBD11A6QL63 1104 aa16.13■□□□□ 0.17
CTNNA1-211ENST00000518910 ITPK1Q13572 414 aa16.13■□□□□ 0.17
CTNNA1-211ENST00000518910 TTC5Q8N0Z6 440 aa16.13■□□□□ 0.17
CTNNA1-211ENST00000518910 LINC00116Q8NCU8 138 aa16.13■□□□□ 0.17
CTNNA1-211ENST00000518910 SLC4A9Q96Q91 983 aa16.12■□□□□ 0.17
CTNNA1-211ENST00000518910 KCPQ6ZWJ8 1503 aa16.12■□□□□ 0.17
CTNNA1-211ENST00000518910 SLC27A3Q5K4L6 730 aa16.11■□□□□ 0.17
CTNNA1-211ENST00000518910 TFCP2L1Q9NZI6 479 aa16.11■□□□□ 0.17
CTNNA1-211ENST00000518910 CEMIPQ8WUJ3 1361 aa16.11■□□□□ 0.17
CTNNA1-211ENST00000518910 AK7Q96M32 723 aa16.1■□□□□ 0.17
CTNNA1-211ENST00000518910 CASZ1Q86V15 1759 aa16.1■□□□□ 0.17
CTNNA1-211ENST00000518910 SLC15A2Q16348 729 aa16.09■□□□□ 0.17
CTNNA1-211ENST00000518910 DNAJC10Q8IXB1 793 aa16.09■□□□□ 0.17
CTNNA1-211ENST00000518910 QSER1Q2KHR3 1735 aa16.08■□□□□ 0.17
CTNNA1-211ENST00000518910 GNPATO15228 680 aa16.08■□□□□ 0.16
CTNNA1-211ENST00000518910 ZBTB7AO95365 584 aa16.08■□□□□ 0.16
CTNNA1-211ENST00000518910 AMIGO3Q86WK7 504 aa16.08■□□□□ 0.16
CTNNA1-211ENST00000518910 ZNF496Q96IT1 587 aaPredicted RBP16.08■□□□□ 0.16
CTNNA1-211ENST00000518910 TRIM35Q9UPQ4 493 aa16.08■□□□□ 0.16
CTNNA1-211ENST00000518910 ZNF330Q9Y3S2 320 aaPredicted RBP16.08■□□□□ 0.16
CTNNA1-211ENST00000518910 PRAMEF22A3QJZ6 481 aa16.07■□□□□ 0.16
CTNNA1-211ENST00000518910 HTATSF1O43719 755 aaKnown RBP16.07■□□□□ 0.16
CTNNA1-211ENST00000518910 PIP4K2AP48426 406 aaPredicted RBP16.07■□□□□ 0.16
CTNNA1-211ENST00000518910 LMOD3Q0VAK6 560 aa16.07■□□□□ 0.16
CTNNA1-211ENST00000518910 TAF7Q15545 349 aaPredicted RBP16.07■□□□□ 0.16
CTNNA1-211ENST00000518910 ZNF790Q6PG37 636 aa16.07■□□□□ 0.16
CTNNA1-211ENST00000518910 TSPYL4Q9UJ04 414 aa16.07■□□□□ 0.16
CTNNA1-211ENST00000518910 ATF5Q9Y2D1 282 aaPredicted RBP16.07■□□□□ 0.16
CTNNA1-211ENST00000518910 C4AP0C0L4 1744 aa16.07■□□□□ 0.16
CTNNA1-211ENST00000518910 LAMB4A4D0S4 1761 aa16.06■□□□□ 0.16
CTNNA1-211ENST00000518910 MSL1Q68DK7 614 aa16.06■□□□□ 0.16
CTNNA1-211ENST00000518910 AKT1S1Q96B36 256 aa16.06■□□□□ 0.16
CTNNA1-211ENST00000518910 ZNF831Q5JPB2 1677 aa16.05■□□□□ 0.16
CTNNA1-211ENST00000518910 PNPLA7Q6ZV29 1317 aa16.04■□□□□ 0.16
CTNNA1-211ENST00000518910 CANXP27824 592 aaKnown RBP16.04■□□□□ 0.16
CTNNA1-211ENST00000518910 CRKLP46109 303 aaKnown RBP16.04■□□□□ 0.16
CTNNA1-211ENST00000518910 NECTIN2Q92692 538 aa16.04■□□□□ 0.16
CTNNA1-211ENST00000518910 FMNL2Q96PY5 1086 aa16.04■□□□□ 0.16
CTNNA1-211ENST00000518910 HEG1Q9ULI3 1381 aa16.03■□□□□ 0.16
CTNNA1-211ENST00000518910 KRT24Q2M2I5 525 aa16.03■□□□□ 0.16
CTNNA1-211ENST00000518910 ARXQ96QS3 562 aa16.03■□□□□ 0.16
CTNNA1-211ENST00000518910 CCER2I3L3R5 266 aa16.02■□□□□ 0.16
CTNNA1-211ENST00000518910 COL23A1Q86Y22 540 aaPredicted RBP16.02■□□□□ 0.16
CTNNA1-211ENST00000518910 CICQ96RK0 1608 aaPredicted RBP16.01■□□□□ 0.15
CTNNA1-211ENST00000518910 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.01■□□□□ 0.15
CTNNA1-211ENST00000518910 A1BGP04217 495 aa16.01■□□□□ 0.15
CTNNA1-211ENST00000518910 CYP19A1P11511 503 aaPredicted RBP16■□□□□ 0.15
CTNNA1-211ENST00000518910 KLHL34Q8N239 644 aa16■□□□□ 0.15
CTNNA1-211ENST00000518910 NGEFQ8N5V2 710 aa16■□□□□ 0.15
CTNNA1-211ENST00000518910 TSR2Q969E8 191 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms