RNA–Protein interactions for RNA: ENST00000518855.5

CLINT1-202, Transcript of clathrin interactor 1, humanhuman

TSL 2

Gene CLINT1, Length 3,394 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-202ENST00000518855 TPM2P07951 284 aa6.45□□□□□ -1.38
CLINT1-202ENST00000518855 PPP1R15BQ5SWA1 713 aa6.45□□□□□ -1.38
CLINT1-202ENST00000518855 GCC1Q96CN9 775 aa6.45□□□□□ -1.38
CLINT1-202ENST00000518855 CHMP4AQ9BY43 222 aa6.45□□□□□ -1.38
CLINT1-202ENST00000518855 GRPEL1Q9HAV7 217 aa6.45□□□□□ -1.38
CLINT1-202ENST00000518855 CHD2O14647 1828 aaKnown RBP6.45□□□□□ -1.38
CLINT1-202ENST00000518855 EVC2Q86UK5 1308 aa6.45□□□□□ -1.38
CLINT1-202ENST00000518855 TRIM27P14373 513 aa6.44□□□□□ -1.38
CLINT1-202ENST00000518855 TAF7LQ5H9L4 462 aa6.44□□□□□ -1.38
CLINT1-202ENST00000518855 PSEN2P49810 448 aa6.44□□□□□ -1.38
CLINT1-202ENST00000518855 ZNF445P59923 1031 aa6.44□□□□□ -1.38
CLINT1-202ENST00000518855 MORC1Q86VD1 984 aa6.44□□□□□ -1.38
CLINT1-202ENST00000518855 LARP6Q9BRS8 491 aaKnown RBP6.44□□□□□ -1.38
CLINT1-202ENST00000518855 PNNQ9H307 717 aaKnown RBP6.44□□□□□ -1.38
CLINT1-202ENST00000518855 RNF166Q96A37 237 aaPredicted RBP6.44□□□□□ -1.38
CLINT1-202ENST00000518855 CNGB1Q14028 1251 aaPredicted RBP6.43□□□□□ -1.38
CLINT1-202ENST00000518855 C14orf37Q86TY3 774 aa6.43□□□□□ -1.38
CLINT1-202ENST00000518855 OXER1Q8TDS5 423 aa6.43□□□□□ -1.38
CLINT1-202ENST00000518855 PDLIM2Q96JY6 352 aa6.43□□□□□ -1.38
CLINT1-202ENST00000518855 RYDENQ9NUL5 291 aaKnown RBP6.43□□□□□ -1.38
CLINT1-202ENST00000518855 TECPR2O15040 1411 aa6.43□□□□□ -1.38
CLINT1-202ENST00000518855 ZNF853P0CG23 659 aa6.43□□□□□ -1.38
CLINT1-202ENST00000518855 TMPOP42166 694 aaKnown RBP6.43□□□□□ -1.38
CLINT1-202ENST00000518855 CCDC173Q0VFZ6 552 aa6.43□□□□□ -1.38
CLINT1-202ENST00000518855 RGS12O14924 1447 aa6.43□□□□□ -1.38
CLINT1-202ENST00000518855 MTHFSP49914 203 aa6.42□□□□□ -1.38
CLINT1-202ENST00000518855 KLHL40Q2TBA0 621 aa6.42□□□□□ -1.38
CLINT1-202ENST00000518855 HSCBQ8IWL3 235 aa6.42□□□□□ -1.38
CLINT1-202ENST00000518855 AFAP1Q8N556 730 aa6.42□□□□□ -1.38
CLINT1-202ENST00000518855 GBP4Q96PP9 640 aa6.42□□□□□ -1.38
CLINT1-202ENST00000518855 ATP10DQ9P241 1426 aa6.42□□□□□ -1.38
CLINT1-202ENST00000518855 ESPNB1AK53 854 aa6.42□□□□□ -1.38
CLINT1-202ENST00000518855 IPO8O15397 1037 aaKnown RBP6.42□□□□□ -1.38
CLINT1-202ENST00000518855 DMRTA1Q5VZB9 504 aa6.42□□□□□ -1.38
CLINT1-202ENST00000518855 TNNQ9UQP3 1299 aa6.41□□□□□ -1.38
CLINT1-202ENST00000518855 ERBB4Q15303 1308 aa6.41□□□□□ -1.38
CLINT1-202ENST00000518855 ZNF500O60304 480 aaPredicted RBP6.41□□□□□ -1.38
CLINT1-202ENST00000518855 CANXP27824 592 aaKnown RBP6.41□□□□□ -1.38
CLINT1-202ENST00000518855 CHD1LQ86WJ1 897 aa6.41□□□□□ -1.38
CLINT1-202ENST00000518855 SSH1Q8WYL5 1049 aa6.41□□□□□ -1.38
CLINT1-202ENST00000518855 TNPO1Q92973 898 aaKnown RBP6.41□□□□□ -1.38
CLINT1-202ENST00000518855 ZBTB7BO15156 539 aaPredicted RBP6.41□□□□□ -1.38
CLINT1-202ENST00000518855 EPB41L2O43491 1005 aaKnown RBP6.41□□□□□ -1.38
CLINT1-202ENST00000518855 FCHSD2O94868 740 aa6.41□□□□□ -1.38
CLINT1-202ENST00000518855 MCM5P33992 734 aa6.41□□□□□ -1.38
CLINT1-202ENST00000518855 SLKQ9H2G2 1235 aaPredicted RBP6.41□□□□□ -1.38
CLINT1-202ENST00000518855 EMILIN3Q9NT22 766 aa6.41□□□□□ -1.38
CLINT1-202ENST00000518855 ARHGEF10O15013 1369 aa6.4□□□□□ -1.38
CLINT1-202ENST00000518855 K7ELQ4 463 aaPredicted RBP6.4□□□□□ -1.38
CLINT1-202ENST00000518855 GLIPR1L2Q4G1C9 344 aa6.4□□□□□ -1.38
CLINT1-202ENST00000518855 EDC4Q6P2E9 1401 aaKnown RBP6.4□□□□□ -1.38
CLINT1-202ENST00000518855 RTL1A6NKG5 1358 aa6.4□□□□□ -1.38
CLINT1-202ENST00000518855 MARF1Q9Y4F3 1742 aaKnown RBP6.4□□□□□ -1.38
CLINT1-202ENST00000518855 DDX27Q96GQ7 796 aaKnown RBP6.4□□□□□ -1.38
CLINT1-202ENST00000518855 PANK2Q9BZ23 570 aa6.4□□□□□ -1.38
CLINT1-202ENST00000518855 PXDNLA1KZ92 1463 aa6.4□□□□□ -1.39
CLINT1-202ENST00000518855 HSP90AB1P08238 724 aaKnown RBP6.4□□□□□ -1.39
CLINT1-202ENST00000518855 SLC12A5Q9H2X9 1139 aa6.4□□□□□ -1.39
CLINT1-202ENST00000518855 KIF3BO15066 747 aa6.39□□□□□ -1.39
CLINT1-202ENST00000518855 OFD1O75665 1012 aa6.39□□□□□ -1.39
CLINT1-202ENST00000518855 CALD1Q05682 793 aaKnown RBP6.39□□□□□ -1.39
CLINT1-202ENST00000518855 IFT57Q9NWB7 429 aa6.39□□□□□ -1.39
CLINT1-202ENST00000518855 PEAK1Q9H792 1746 aa6.39□□□□□ -1.39
CLINT1-202ENST00000518855 AK9Q5TCS8 1911 aa6.39□□□□□ -1.39
CLINT1-202ENST00000518855 KIAA0232Q92628 1395 aa6.39□□□□□ -1.39
CLINT1-202ENST00000518855 SSH2Q76I76 1423 aa6.39□□□□□ -1.39
CLINT1-202ENST00000518855 ARHGAP33O14559 1287 aa6.39□□□□□ -1.39
CLINT1-202ENST00000518855 TMEM57Q8N5G2 664 aa6.39□□□□□ -1.39
CLINT1-202ENST00000518855 MRPL50Q8N5N7 158 aaKnown RBP6.39□□□□□ -1.39
CLINT1-202ENST00000518855 PDCL3Q9H2J4 239 aa6.39□□□□□ -1.39
CLINT1-202ENST00000518855 CWC22Q9HCG8 908 aaKnown RBP6.39□□□□□ -1.39
CLINT1-202ENST00000518855 CFAP65Q6ZU64 1925 aaKnown RBP6.39□□□□□ -1.39
CLINT1-202ENST00000518855 EXOSC9Q06265 439 aaKnown RBP6.38□□□□□ -1.39
CLINT1-202ENST00000518855 GAS2L3Q86XJ1 694 aa6.38□□□□□ -1.39
CLINT1-202ENST00000518855 FTSJ3Q8IY81 847 aaKnown RBP6.38□□□□□ -1.39
CLINT1-202ENST00000518855 PHRF1Q9P1Y6 1649 aaKnown RBP6.38□□□□□ -1.39
CLINT1-202ENST00000518855 PBX2P40425 430 aa6.38□□□□□ -1.39
CLINT1-202ENST00000518855 RABEP1Q15276 862 aa6.38□□□□□ -1.39
CLINT1-202ENST00000518855 ADGRD1Q6QNK2 874 aa6.38□□□□□ -1.39
CLINT1-202ENST00000518855 ZSCAN30Q86W11 494 aa6.38□□□□□ -1.39
CLINT1-202ENST00000518855 MAP7D2Q96T17 732 aa6.38□□□□□ -1.39
CLINT1-202ENST00000518855 SMC4Q9NTJ3 1288 aa6.38□□□□□ -1.39
CLINT1-202ENST00000518855 SLC52A1Q9NWF4 448 aa6.38□□□□□ -1.39
CLINT1-202ENST00000518855 NOB1Q9ULX3 412 aaKnown RBP6.38□□□□□ -1.39
CLINT1-202ENST00000518855 OSBPL3Q9H4L5 887 aa6.38□□□□□ -1.39
CLINT1-202ENST00000518855 MED1Q15648 1581 aaPredicted RBP6.37□□□□□ -1.39
CLINT1-202ENST00000518855 SIRT1Q96EB6 747 aa6.37□□□□□ -1.39
CLINT1-202ENST00000518855 KCNK17Q96T54 332 aa6.37□□□□□ -1.39
CLINT1-202ENST00000518855 NOL7Q9UMY1 257 aaKnown RBP6.37□□□□□ -1.39
CLINT1-202ENST00000518855 RIMS2Q9UQ26 1411 aa6.37□□□□□ -1.39
CLINT1-202ENST00000518855 LMTK3Q96Q04 1460 aa6.37□□□□□ -1.39
CLINT1-202ENST00000518855 FYB1O15117 783 aa6.37□□□□□ -1.39
CLINT1-202ENST00000518855 TBC1D12O60347 775 aa6.37□□□□□ -1.39
CLINT1-202ENST00000518855 HSP90AA1P07900 732 aaKnown RBP6.37□□□□□ -1.39
CLINT1-202ENST00000518855 NUCB2P80303 420 aa6.37□□□□□ -1.39
CLINT1-202ENST00000518855 INTS3Q68E01 1043 aaKnown RBP6.37□□□□□ -1.39
CLINT1-202ENST00000518855 ZNF454Q8N9F8 522 aa6.37□□□□□ -1.39
CLINT1-202ENST00000518855 VAMP4O75379 141 aa6.37□□□□□ -1.39
CLINT1-202ENST00000518855 CDC45O75419 566 aa6.37□□□□□ -1.39
CLINT1-202ENST00000518855 TBC1D9Q6ZT07 1266 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms