RNA–Protein interactions for RNA: ENST00000517562.2

C8orf88-201, Transcript of chromosome 8 open reading frame 88, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C8orf88, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C8orf88-201ENST00000517562 LRRC4BQ9NT99 713 aa20.77■□□□□ 0.92
C8orf88-201ENST00000517562 SLC39A6Q13433 755 aa20.76■□□□□ 0.91
C8orf88-201ENST00000517562 RUNDC1Q96C34 613 aa20.76■□□□□ 0.91
C8orf88-201ENST00000517562 SLC52A2Q9HAB3 445 aa20.75■□□□□ 0.91
C8orf88-201ENST00000517562 PSDA5PKW4 1024 aaPredicted RBP20.74■□□□□ 0.91
C8orf88-201ENST00000517562 TMPOP42166 694 aaKnown RBP20.74■□□□□ 0.91
C8orf88-201ENST00000517562 RIPK4P57078 832 aa20.74■□□□□ 0.91
C8orf88-201ENST00000517562 NUP188Q5SRE5 1749 aa20.74■□□□□ 0.91
C8orf88-201ENST00000517562 RTF1Q92541 710 aaKnown RBP20.74■□□□□ 0.91
C8orf88-201ENST00000517562 RREB1Q92766 1687 aa20.73■□□□□ 0.91
C8orf88-201ENST00000517562 LY75O60449 1722 aa20.73■□□□□ 0.91
C8orf88-201ENST00000517562 APAF1O14727 1248 aa20.73■□□□□ 0.91
C8orf88-201ENST00000517562 RBM42Q9BTD8 480 aaKnown RBP20.73■□□□□ 0.91
C8orf88-201ENST00000517562 PALLDQ8WX93 1383 aa20.72■□□□□ 0.91
C8orf88-201ENST00000517562 PTCD1O75127 700 aaKnown RBP20.72■□□□□ 0.91
C8orf88-201ENST00000517562 TEFQ10587 303 aa20.72■□□□□ 0.91
C8orf88-201ENST00000517562 MIS18AQ9NYP9 233 aa20.72■□□□□ 0.91
C8orf88-201ENST00000517562 CCNL1Q9UK58 526 aaPredicted RBP20.72■□□□□ 0.91
C8orf88-201ENST00000517562 ADAMTS7Q9UKP4 1686 aa20.71■□□□□ 0.91
C8orf88-201ENST00000517562 KCNQ3O43525 872 aa20.71■□□□□ 0.91
C8orf88-201ENST00000517562 ANO8Q9HCE9 1232 aaPredicted RBP20.71■□□□□ 0.91
C8orf88-201ENST00000517562 R3HDM1Q15032 1099 aaKnown RBP20.7■□□□□ 0.9
C8orf88-201ENST00000517562 SMARCC1Q92922 1105 aaPredicted RBP20.7■□□□□ 0.9
C8orf88-201ENST00000517562 SLC4A9Q96Q91 983 aa20.7■□□□□ 0.9
C8orf88-201ENST00000517562 RGPD3A6NKT7 1758 aaPredicted RBP20.69■□□□□ 0.9
C8orf88-201ENST00000517562 RGPD4Q7Z3J3 1758 aa20.69■□□□□ 0.9
C8orf88-201ENST00000517562 SIPA1L3O60292 1781 aaPredicted RBP20.69■□□□□ 0.9
C8orf88-201ENST00000517562 LOC102724428A0A0B4J2F2 783 aa20.68■□□□□ 0.9
C8orf88-201ENST00000517562 SIK1P57059 783 aa20.68■□□□□ 0.9
C8orf88-201ENST00000517562 SMIM5Q71RC9 77 aa20.68■□□□□ 0.9
C8orf88-201ENST00000517562 SALL2Q9Y467 1007 aaPredicted RBP20.68■□□□□ 0.9
C8orf88-201ENST00000517562 ATP6V1AP38606 617 aa20.67■□□□□ 0.9
C8orf88-201ENST00000517562 ITPK1Q13572 414 aa20.67■□□□□ 0.9
C8orf88-201ENST00000517562 TRIM35Q9UPQ4 493 aa20.67■□□□□ 0.9
C8orf88-201ENST00000517562 CEMIPQ8WUJ3 1361 aa20.67■□□□□ 0.9
C8orf88-201ENST00000517562 TAF1LQ8IZX4 1826 aa20.67■□□□□ 0.9
C8orf88-201ENST00000517562 HTATSF1O43719 755 aaKnown RBP20.66■□□□□ 0.9
C8orf88-201ENST00000517562 ZNF827Q17R98 1081 aa20.66■□□□□ 0.9
C8orf88-201ENST00000517562 NBPF14Q5TI25 921 aa20.66■□□□□ 0.9
C8orf88-201ENST00000517562 BTBD11A6QL63 1104 aa20.65■□□□□ 0.9
C8orf88-201ENST00000517562 SLC27A3Q5K4L6 730 aa20.65■□□□□ 0.9
C8orf88-201ENST00000517562 PDGFDQ9GZP0 370 aaPredicted RBP20.65■□□□□ 0.9
C8orf88-201ENST00000517562 MRC1P22897 1456 aa20.64■□□□□ 0.89
C8orf88-201ENST00000517562 LINC00116Q8NCU8 138 aa20.64■□□□□ 0.89
C8orf88-201ENST00000517562 TAF7Q15545 349 aaPredicted RBP20.63■□□□□ 0.89
C8orf88-201ENST00000517562 STK32BQ9NY57 414 aa20.63■□□□□ 0.89
C8orf88-201ENST00000517562 CCER2I3L3R5 266 aa20.62■□□□□ 0.89
C8orf88-201ENST00000517562 SLC15A2Q16348 729 aa20.62■□□□□ 0.89
C8orf88-201ENST00000517562 ZNF496Q96IT1 587 aaPredicted RBP20.62■□□□□ 0.89
C8orf88-201ENST00000517562 LAS1LQ9Y4W2 734 aaKnown RBP20.62■□□□□ 0.89
C8orf88-201ENST00000517562 C5P01031 1676 aa20.61■□□□□ 0.89
C8orf88-201ENST00000517562 ZNF790Q6PG37 636 aa20.61■□□□□ 0.89
C8orf88-201ENST00000517562 DNAJC10Q8IXB1 793 aa20.61■□□□□ 0.89
C8orf88-201ENST00000517562 AKT1S1Q96B36 256 aa20.61■□□□□ 0.89
C8orf88-201ENST00000517562 MYH14Q7Z406 1995 aaKnown RBP20.61■□□□□ 0.89
C8orf88-201ENST00000517562 AMIGO3Q86WK7 504 aa20.6■□□□□ 0.89
C8orf88-201ENST00000517562 TTC5Q8N0Z6 440 aa20.6■□□□□ 0.89
C8orf88-201ENST00000517562 PAPPAQ13219 1627 aa20.6■□□□□ 0.89
C8orf88-201ENST00000517562 TUBGCP6Q96RT7 1819 aa20.6■□□□□ 0.89
C8orf88-201ENST00000517562 TFCP2L1Q9NZI6 479 aa20.59■□□□□ 0.89
C8orf88-201ENST00000517562 PRAMEF22A3QJZ6 481 aa20.58■□□□□ 0.89
C8orf88-201ENST00000517562 KCPQ6ZWJ8 1503 aa20.58■□□□□ 0.88
C8orf88-201ENST00000517562 UBR2Q8IWV8 1755 aa20.57■□□□□ 0.88
C8orf88-201ENST00000517562 LMOD3Q0VAK6 560 aa20.57■□□□□ 0.88
C8orf88-201ENST00000517562 TJP1Q07157 1748 aa20.56■□□□□ 0.88
C8orf88-201ENST00000517562 C4BP0C0L5 1744 aa20.56■□□□□ 0.88
C8orf88-201ENST00000517562 PHF14O94880 888 aa20.55■□□□□ 0.88
C8orf88-201ENST00000517562 TSPYL4Q9UJ04 414 aa20.55■□□□□ 0.88
C8orf88-201ENST00000517562 MSH5O43196 834 aa20.54■□□□□ 0.88
C8orf88-201ENST00000517562 AK7Q96M32 723 aa20.54■□□□□ 0.88
C8orf88-201ENST00000517562 FMNL2Q96PY5 1086 aa20.54■□□□□ 0.88
C8orf88-201ENST00000517562 COL5A3P25940 1745 aaPredicted RBP20.53■□□□□ 0.88
C8orf88-201ENST00000517562 GNPATO15228 680 aa20.53■□□□□ 0.88
C8orf88-201ENST00000517562 CRKLP46109 303 aaKnown RBP20.53■□□□□ 0.88
C8orf88-201ENST00000517562 COL23A1Q86Y22 540 aaPredicted RBP20.53■□□□□ 0.88
C8orf88-201ENST00000517562 USP16Q9Y5T5 823 aa20.53■□□□□ 0.88
C8orf88-201ENST00000517562 HEG1Q9ULI3 1381 aa20.53■□□□□ 0.88
C8orf88-201ENST00000517562 KDM3BQ7LBC6 1761 aa20.53■□□□□ 0.88
C8orf88-201ENST00000517562 PNPLA7Q6ZV29 1317 aa20.53■□□□□ 0.88
C8orf88-201ENST00000517562 UBR3Q6ZT12 1888 aa20.52■□□□□ 0.88
C8orf88-201ENST00000517562 ZBTB7AO95365 584 aa20.52■□□□□ 0.88
C8orf88-201ENST00000517562 CYP19A1P11511 503 aaPredicted RBP20.52■□□□□ 0.88
C8orf88-201ENST00000517562 PIP4K2AP48426 406 aaPredicted RBP20.52■□□□□ 0.88
C8orf88-201ENST00000517562 KRT24Q2M2I5 525 aa20.52■□□□□ 0.88
C8orf88-201ENST00000517562 INTS5Q6P9B9 1019 aaKnown RBP20.52■□□□□ 0.88
C8orf88-201ENST00000517562 WWC1Q8IX03 1113 aa20.52■□□□□ 0.88
C8orf88-201ENST00000517562 A1BGP04217 495 aa20.51■□□□□ 0.87
C8orf88-201ENST00000517562 EIF4A1P60842 406 aaKnown RBP20.51■□□□□ 0.87
C8orf88-201ENST00000517562 ATF5Q9Y2D1 282 aaPredicted RBP20.51■□□□□ 0.87
C8orf88-201ENST00000517562 CHL1O00533 1208 aa20.5■□□□□ 0.87
C8orf88-201ENST00000517562 CANXP27824 592 aaKnown RBP20.5■□□□□ 0.87
C8orf88-201ENST00000517562 ZNF831Q5JPB2 1677 aa20.5■□□□□ 0.87
C8orf88-201ENST00000517562 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.48■□□□□ 0.87
C8orf88-201ENST00000517562 SNRPA1P09661 255 aaKnown RBP20.48■□□□□ 0.87
C8orf88-201ENST00000517562 RC3H1Q5TC82 1133 aaKnown RBP20.48■□□□□ 0.87
C8orf88-201ENST00000517562 VSIG10Q8N0Z9 540 aa20.48■□□□□ 0.87
C8orf88-201ENST00000517562 MBIPQ9NS73 344 aa20.48■□□□□ 0.87
C8orf88-201ENST00000517562 CASZ1Q86V15 1759 aa20.47■□□□□ 0.87
C8orf88-201ENST00000517562 CCDC87Q9NVE4 849 aa20.47■□□□□ 0.87
C8orf88-201ENST00000517562 ZBTB1Q9Y2K1 713 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms