RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 DHX9Q08211 1270 aaKnown RBP9.13□□□□□ -0.95
CTNNA1-202ENST00000517533 NR5A1Q13285 461 aa9.13□□□□□ -0.95
CTNNA1-202ENST00000517533 TBCELQ5QJ74 424 aa9.13□□□□□ -0.95
CTNNA1-202ENST00000517533 GTF3C2Q8WUA4 911 aaPredicted RBP9.13□□□□□ -0.95
CTNNA1-202ENST00000517533 MYT1Q01538 1121 aa9.12□□□□□ -0.95
CTNNA1-202ENST00000517533 IFFO2Q5TF58 517 aa9.12□□□□□ -0.95
CTNNA1-202ENST00000517533 SCG3Q8WXD2 468 aaKnown RBP9.12□□□□□ -0.95
CTNNA1-202ENST00000517533 SLC4A9Q96Q91 983 aa9.12□□□□□ -0.95
CTNNA1-202ENST00000517533 A0A1W2PRU2 124 aa9.11□□□□□ -0.95
CTNNA1-202ENST00000517533 ICMTO60725 284 aa9.11□□□□□ -0.95
CTNNA1-202ENST00000517533 IL2RAP01589 272 aa9.11□□□□□ -0.95
CTNNA1-202ENST00000517533 IGFBP4P22692 258 aa9.11□□□□□ -0.95
CTNNA1-202ENST00000517533 FOXK2Q01167 660 aa9.11□□□□□ -0.95
CTNNA1-202ENST00000517533 CBLBQ13191 982 aa9.11□□□□□ -0.95
CTNNA1-202ENST00000517533 NAA30Q147X3 362 aaPredicted RBP9.11□□□□□ -0.95
CTNNA1-202ENST00000517533 KLF16Q9BXK1 252 aaPredicted RBP9.11□□□□□ -0.95
CTNNA1-202ENST00000517533 H3BRB1 525 aa9.1□□□□□ -0.95
CTNNA1-202ENST00000517533 ALDH1A1P00352 501 aa9.1□□□□□ -0.95
CTNNA1-202ENST00000517533 ZNF697Q5TEC3 545 aa9.1□□□□□ -0.95
CTNNA1-202ENST00000517533 TUT1Q9H6E5 874 aaKnown RBP9.1□□□□□ -0.95
CTNNA1-202ENST00000517533 ARHGEF10LQ9HCE6 1279 aa9.1□□□□□ -0.95
CTNNA1-202ENST00000517533 EGFL7Q9UHF1 273 aa9.1□□□□□ -0.95
CTNNA1-202ENST00000517533 HRH3Q9Y5N1 445 aa9.1□□□□□ -0.95
CTNNA1-202ENST00000517533 FOXC1Q12948 553 aa9.09□□□□□ -0.95
CTNNA1-202ENST00000517533 NNTQ13423 1086 aa9.09□□□□□ -0.95
CTNNA1-202ENST00000517533 SAP130Q9H0E3 1048 aa9.09□□□□□ -0.95
CTNNA1-202ENST00000517533 ATAD2Q6PL18 1390 aa9.09□□□□□ -0.95
CTNNA1-202ENST00000517533 UNCXA6NJT0 531 aa9.08□□□□□ -0.96
CTNNA1-202ENST00000517533 J3QL48 77 aa9.08□□□□□ -0.96
CTNNA1-202ENST00000517533 GNRH1P01148 92 aa9.08□□□□□ -0.96
CTNNA1-202ENST00000517533 ARHGAP4P98171 946 aa9.08□□□□□ -0.96
CTNNA1-202ENST00000517533 CYP2U1Q7Z449 544 aa9.08□□□□□ -0.96
CTNNA1-202ENST00000517533 ZNF598Q86UK7 904 aaKnown RBP9.08□□□□□ -0.96
CTNNA1-202ENST00000517533 XAGE2Q96GT9 111 aa9.08□□□□□ -0.96
CTNNA1-202ENST00000517533 SCHIP1Q9P0W5 487 aaPredicted RBP9.08□□□□□ -0.96
CTNNA1-202ENST00000517533 BIN2Q9UBW5 565 aaPredicted RBP9.08□□□□□ -0.96
CTNNA1-202ENST00000517533 E9PSI1 815 aa9.07□□□□□ -0.96
CTNNA1-202ENST00000517533 MTFR1Q15390 333 aa9.07□□□□□ -0.96
CTNNA1-202ENST00000517533 SLC9A9Q8IVB4 645 aa9.07□□□□□ -0.96
CTNNA1-202ENST00000517533 ITPKCQ96DU7 683 aa9.07□□□□□ -0.96
CTNNA1-202ENST00000517533 ESF1Q9H501 851 aaKnown RBP9.07□□□□□ -0.96
CTNNA1-202ENST00000517533 ZFAND3Q9H8U3 227 aa9.07□□□□□ -0.96
CTNNA1-202ENST00000517533 IQSEC3Q9UPP2 1182 aaPredicted RBP9.07□□□□□ -0.96
CTNNA1-202ENST00000517533 EMILIN1Q9Y6C2 1016 aa9.07□□□□□ -0.96
CTNNA1-202ENST00000517533 A0A0G2JS52 829 aa9.06□□□□□ -0.96
CTNNA1-202ENST00000517533 A6NJY4 79 aa9.06□□□□□ -0.96
CTNNA1-202ENST00000517533 BACH1O14867 736 aa9.06□□□□□ -0.96
CTNNA1-202ENST00000517533 FOXO3O43524 673 aa9.06□□□□□ -0.96
CTNNA1-202ENST00000517533 ADH1AP07327 375 aa9.06□□□□□ -0.96
CTNNA1-202ENST00000517533 SMTNP53814 917 aa9.06□□□□□ -0.96
CTNNA1-202ENST00000517533 MARSP56192 900 aaKnown RBP9.06□□□□□ -0.96
CTNNA1-202ENST00000517533 SH3PXD2AQ5TCZ1 1133 aa9.06□□□□□ -0.96
CTNNA1-202ENST00000517533 ZNF295-AS1Q8N0V1 137 aa9.06□□□□□ -0.96
CTNNA1-202ENST00000517533 CHMP7Q8WUX9 453 aaPredicted RBP9.06□□□□□ -0.96
CTNNA1-202ENST00000517533 AGBL1Q96MI9 1066 aa9.06□□□□□ -0.96
CTNNA1-202ENST00000517533 GDF9O60383 454 aa9.05□□□□□ -0.96
CTNNA1-202ENST00000517533 FAM26DQ5JW98 314 aa9.05□□□□□ -0.96
CTNNA1-202ENST00000517533 COL26A1Q96A83 441 aa9.05□□□□□ -0.96
CTNNA1-202ENST00000517533 PGPEP1Q9NXJ5 209 aa9.05□□□□□ -0.96
CTNNA1-202ENST00000517533 AMOTL2Q9Y2J4 779 aa9.05□□□□□ -0.96
CTNNA1-202ENST00000517533 TRIM67Q6ZTA4 783 aa9.04□□□□□ -0.96
CTNNA1-202ENST00000517533 Q6ZVU0 165 aa9.04□□□□□ -0.96
CTNNA1-202ENST00000517533 GLYCTKQ8IVS8 523 aa9.04□□□□□ -0.96
CTNNA1-202ENST00000517533 ZDHHC1Q8WTX9 485 aa9.04□□□□□ -0.96
CTNNA1-202ENST00000517533 CNKSR1Q969H4 720 aa9.04□□□□□ -0.96
CTNNA1-202ENST00000517533 C2orf49Q9BVC5 232 aaPredicted RBP9.04□□□□□ -0.96
CTNNA1-202ENST00000517533 PRKD2Q9BZL6 878 aa9.04□□□□□ -0.96
CTNNA1-202ENST00000517533 FHDC1Q9C0D6 1143 aaPredicted RBP9.04□□□□□ -0.96
CTNNA1-202ENST00000517533 TNFRSF10BO14763 440 aa9.03□□□□□ -0.96
CTNNA1-202ENST00000517533 PPP1R12BO60237 982 aaPredicted RBP9.03□□□□□ -0.96
CTNNA1-202ENST00000517533 PTCD1O75127 700 aaKnown RBP9.03□□□□□ -0.96
CTNNA1-202ENST00000517533 FKBP4Q02790 459 aaKnown RBP eCLIP9.03□□□□□ -0.96
CTNNA1-202ENST00000517533 NPAS4Q8IUM7 802 aa9.03□□□□□ -0.96
CTNNA1-202ENST00000517533 HELQQ8TDG4 1101 aa9.03□□□□□ -0.96
CTNNA1-202ENST00000517533 TNFRSF10AO00220 468 aa9.02□□□□□ -0.97
CTNNA1-202ENST00000517533 ZIC2O95409 532 aaPredicted RBP9.02□□□□□ -0.97
CTNNA1-202ENST00000517533 TIMP2P16035 220 aa9.02□□□□□ -0.97
CTNNA1-202ENST00000517533 COX20Q5RI15 118 aa9.02□□□□□ -0.97
CTNNA1-202ENST00000517533 POTEAQ6S8J7 498 aa9.02□□□□□ -0.97
CTNNA1-202ENST00000517533 SNIP1Q8TAD8 396 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-202ENST00000517533 ESYT1Q9BSJ8 1104 aa9.02□□□□□ -0.97
CTNNA1-202ENST00000517533 QTRT2Q9H974 415 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-202ENST00000517533 TOR4AQ9NXH8 423 aa9.02□□□□□ -0.97
CTNNA1-202ENST00000517533 PLA2G2EQ9NZK7 142 aa9.02□□□□□ -0.97
CTNNA1-202ENST00000517533 LRFN2Q9ULH4 789 aa9.02□□□□□ -0.97
CTNNA1-202ENST00000517533 WASF2Q9Y6W5 498 aa9.02□□□□□ -0.97
CTNNA1-202ENST00000517533 ANKRD33BA6NCL7 494 aa9.01□□□□□ -0.97
CTNNA1-202ENST00000517533 NPR3P17342 541 aa9.01□□□□□ -0.97
CTNNA1-202ENST00000517533 SMPD1P17405 629 aa9.01□□□□□ -0.97
CTNNA1-202ENST00000517533 MPSTP25325 297 aa9.01□□□□□ -0.97
CTNNA1-202ENST00000517533 PTGIRP43119 386 aa9.01□□□□□ -0.97
CTNNA1-202ENST00000517533 WDR4P57081 412 aaKnown RBP9.01□□□□□ -0.97
CTNNA1-202ENST00000517533 TAGLNQ01995 201 aaKnown RBP9.01□□□□□ -0.97
CTNNA1-202ENST00000517533 CLN3Q13286 438 aa9.01□□□□□ -0.97
CTNNA1-202ENST00000517533 TLR1Q15399 786 aa9.01□□□□□ -0.97
CTNNA1-202ENST00000517533 ESCO1Q5FWF5 840 aa9.01□□□□□ -0.97
CTNNA1-202ENST00000517533 RBM47A0AV96 593 aaKnown RBP9□□□□□ -0.97
CTNNA1-202ENST00000517533 CDK2AP1O14519 115 aa9□□□□□ -0.97
CTNNA1-202ENST00000517533 CENPCQ03188 943 aa9□□□□□ -0.97
CTNNA1-202ENST00000517533 SF3B2Q13435 895 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms