RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 SRGAP3O43295 1099 aa12.95□□□□□ -0.34
PCDHGA1-202ENST00000517417 C16orf71Q8IYS4 520 aaPredicted RBP12.95□□□□□ -0.34
PCDHGA1-202ENST00000517417 VAMP4O75379 141 aa12.94□□□□□ -0.34
PCDHGA1-202ENST00000517417 TPM3P06753 285 aa12.94□□□□□ -0.34
PCDHGA1-202ENST00000517417 CEBPAP49715 358 aaPredicted RBP12.94□□□□□ -0.34
PCDHGA1-202ENST00000517417 MTMR7Q9Y216 660 aa12.94□□□□□ -0.34
PCDHGA1-202ENST00000517417 FAM83GA6ND36 823 aa12.94□□□□□ -0.34
PCDHGA1-202ENST00000517417 NOC3LQ8WTT2 800 aaKnown RBP12.94□□□□□ -0.34
PCDHGA1-202ENST00000517417 EXOC6BQ9Y2D4 811 aa12.94□□□□□ -0.34
PCDHGA1-202ENST00000517417 ERICH2A1L162 156 aa12.94□□□□□ -0.34
PCDHGA1-202ENST00000517417 AMOTL1Q8IY63 956 aa12.93□□□□□ -0.34
PCDHGA1-202ENST00000517417 KIDINS220Q9ULH0 1771 aa12.93□□□□□ -0.34
PCDHGA1-202ENST00000517417 SDSP20132 328 aa12.93□□□□□ -0.34
PCDHGA1-202ENST00000517417 CABP4P57796 275 aa12.93□□□□□ -0.34
PCDHGA1-202ENST00000517417 FIBPO43427 364 aa12.93□□□□□ -0.34
PCDHGA1-202ENST00000517417 PRIM1P49642 420 aaKnown RBP12.93□□□□□ -0.34
PCDHGA1-202ENST00000517417 PRDM11Q9NQV5 511 aa12.93□□□□□ -0.34
PCDHGA1-202ENST00000517417 CLTCL1P53675 1640 aa12.93□□□□□ -0.34
PCDHGA1-202ENST00000517417 WDR33Q9C0J8 1336 aaKnown RBP12.93□□□□□ -0.34
PCDHGA1-202ENST00000517417 ATP2B1P20020 1258 aa12.92□□□□□ -0.34
PCDHGA1-202ENST00000517417 MEX3CQ5U5Q3 659 aaKnown RBP12.92□□□□□ -0.34
PCDHGA1-202ENST00000517417 CCDC73Q6ZRK6 1079 aa12.92□□□□□ -0.34
PCDHGA1-202ENST00000517417 PLEKHM2Q8IWE5 1019 aa12.92□□□□□ -0.34
PCDHGA1-202ENST00000517417 PUS7Q96PZ0 661 aaKnown RBP12.92□□□□□ -0.34
PCDHGA1-202ENST00000517417 SBNO2Q9Y2G9 1366 aa12.92□□□□□ -0.34
PCDHGA1-202ENST00000517417 OFD1O75665 1012 aa12.92□□□□□ -0.34
PCDHGA1-202ENST00000517417 SASS6Q6UVJ0 657 aa12.92□□□□□ -0.34
PCDHGA1-202ENST00000517417 C8orf58Q8NAV2 365 aa12.92□□□□□ -0.34
PCDHGA1-202ENST00000517417 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.92□□□□□ -0.34
PCDHGA1-202ENST00000517417 ZGPATQ8N5A5 531 aaKnown RBP12.92□□□□□ -0.34
PCDHGA1-202ENST00000517417 UPF3BQ9BZI7 483 aaKnown RBP12.92□□□□□ -0.34
PCDHGA1-202ENST00000517417 PSMA5P28066 241 aa12.92□□□□□ -0.34
PCDHGA1-202ENST00000517417 SAMD1Q6SPF0 538 aaPredicted RBP12.92□□□□□ -0.34
PCDHGA1-202ENST00000517417 SDF4Q9BRK5 362 aa12.92□□□□□ -0.34
PCDHGA1-202ENST00000517417 MADDQ8WXG6 1647 aa12.92□□□□□ -0.34
PCDHGA1-202ENST00000517417 BTBD11A6QL63 1104 aa12.91□□□□□ -0.34
PCDHGA1-202ENST00000517417 USHBP1Q8N6Y0 703 aa12.91□□□□□ -0.34
PCDHGA1-202ENST00000517417 PHACTR3Q96KR7 559 aa12.91□□□□□ -0.34
PCDHGA1-202ENST00000517417 LRSAM1Q6UWE0 723 aa12.91□□□□□ -0.34
PCDHGA1-202ENST00000517417 TSR1Q2NL82 804 aaKnown RBP12.91□□□□□ -0.34
PCDHGA1-202ENST00000517417 FOXO3O43524 673 aa12.9□□□□□ -0.34
PCDHGA1-202ENST00000517417 CD2BP2O95400 341 aaKnown RBP12.9□□□□□ -0.34
PCDHGA1-202ENST00000517417 HMGN5P82970 282 aaKnown RBP12.9□□□□□ -0.34
PCDHGA1-202ENST00000517417 CEBPZQ03701 1054 aaKnown RBP12.9□□□□□ -0.34
PCDHGA1-202ENST00000517417 CCDC85AQ96PX6 553 aaPredicted RBP12.9□□□□□ -0.34
PCDHGA1-202ENST00000517417 GDPD2Q9HCC8 539 aa12.9□□□□□ -0.34
PCDHGA1-202ENST00000517417 LETM1O95202 739 aaPredicted RBP12.9□□□□□ -0.34
PCDHGA1-202ENST00000517417 SAFBQ15424 915 aaKnown RBP eCLIP12.9□□□□□ -0.34
PCDHGA1-202ENST00000517417 BCL11BQ9C0K0 894 aaPredicted RBP12.9□□□□□ -0.34
PCDHGA1-202ENST00000517417 STK3Q13188 491 aa12.9□□□□□ -0.34
PCDHGA1-202ENST00000517417 USP26Q9BXU7 913 aa12.9□□□□□ -0.34
PCDHGA1-202ENST00000517417 RBSNQ9H1K0 784 aa12.9□□□□□ -0.34
PCDHGA1-202ENST00000517417 DCTPP1Q9H773 170 aa12.9□□□□□ -0.34
PCDHGA1-202ENST00000517417 TET3O43151 1660 aa12.89□□□□□ -0.35
PCDHGA1-202ENST00000517417 SPHKAPQ2M3C7 1700 aa12.89□□□□□ -0.35
PCDHGA1-202ENST00000517417 TSHZ3Q63HK5 1081 aa12.89□□□□□ -0.35
PCDHGA1-202ENST00000517417 F6X3S4 739 aa12.89□□□□□ -0.35
PCDHGA1-202ENST00000517417 ANKRD44Q8N8A2 993 aa12.89□□□□□ -0.35
PCDHGA1-202ENST00000517417 TRIM34Q9BYJ4 488 aa12.89□□□□□ -0.35
PCDHGA1-202ENST00000517417 CNNM1Q9NRU3 951 aa12.89□□□□□ -0.35
PCDHGA1-202ENST00000517417 RRP12Q5JTH9 1297 aaKnown RBP12.89□□□□□ -0.35
PCDHGA1-202ENST00000517417 TMX3Q96JJ7 454 aa12.89□□□□□ -0.35
PCDHGA1-202ENST00000517417 POLKQ9UBT6 870 aa12.89□□□□□ -0.35
PCDHGA1-202ENST00000517417 NPATQ14207 1427 aa12.89□□□□□ -0.35
PCDHGA1-202ENST00000517417 YEATS2Q9ULM3 1422 aa12.89□□□□□ -0.35
PCDHGA1-202ENST00000517417 GNAT3A8MTJ3 354 aa12.89□□□□□ -0.35
PCDHGA1-202ENST00000517417 ERC1Q8IUD2 1116 aa12.89□□□□□ -0.35
PCDHGA1-202ENST00000517417 STK11IPQ8N1F8 1099 aa12.89□□□□□ -0.35
PCDHGA1-202ENST00000517417 PLEKHF1Q96S99 279 aa12.89□□□□□ -0.35
PCDHGA1-202ENST00000517417 ZKSCAN5Q9Y2L8 839 aa12.89□□□□□ -0.35
PCDHGA1-202ENST00000517417 NUTM2BA6NNL0 878 aaPredicted RBP12.88□□□□□ -0.35
PCDHGA1-202ENST00000517417 NUTM2EB1AL46 878 aaPredicted RBP12.88□□□□□ -0.35
PCDHGA1-202ENST00000517417 MX1P20591 662 aa12.88□□□□□ -0.35
PCDHGA1-202ENST00000517417 MCM5P33992 734 aa12.88□□□□□ -0.35
PCDHGA1-202ENST00000517417 CWC27Q6UX04 472 aaKnown RBP12.88□□□□□ -0.35
PCDHGA1-202ENST00000517417 AACSQ86V21 672 aa12.88□□□□□ -0.35
PCDHGA1-202ENST00000517417 NUTM2AQ8IVF1 878 aaPredicted RBP12.88□□□□□ -0.35
PCDHGA1-202ENST00000517417 TBC1D2BQ9UPU7 963 aa12.88□□□□□ -0.35
PCDHGA1-202ENST00000517417 PTCD1O75127 700 aaKnown RBP12.88□□□□□ -0.35
PCDHGA1-202ENST00000517417 KIF6Q6ZMV9 814 aa12.88□□□□□ -0.35
PCDHGA1-202ENST00000517417 SPC24Q8NBT2 197 aa12.88□□□□□ -0.35
PCDHGA1-202ENST00000517417 MEIS3Q99687 375 aa12.88□□□□□ -0.35
PCDHGA1-202ENST00000517417 DEPDC5O75140 1603 aa12.88□□□□□ -0.35
PCDHGA1-202ENST00000517417 MROH1Q8NDA8 1641 aa12.88□□□□□ -0.35
PCDHGA1-202ENST00000517417 A0A0U1RQG5 324 aaPredicted RBP12.88□□□□□ -0.35
PCDHGA1-202ENST00000517417 OTUD7AQ8TE49 926 aaPredicted RBP12.88□□□□□ -0.35
PCDHGA1-202ENST00000517417 PHF23Q9BUL5 403 aaPredicted RBP12.88□□□□□ -0.35
PCDHGA1-202ENST00000517417 SPG7Q9UQ90 795 aa12.88□□□□□ -0.35
PCDHGA1-202ENST00000517417 MYOM2P54296 1465 aa12.88□□□□□ -0.35
PCDHGA1-202ENST00000517417 NUTM1Q86Y26 1132 aa12.87□□□□□ -0.35
PCDHGA1-202ENST00000517417 PCMTD1Q96MG8 357 aaPredicted RBP12.87□□□□□ -0.35
PCDHGA1-202ENST00000517417 AMOTL2Q9Y2J4 779 aa12.87□□□□□ -0.35
PCDHGA1-202ENST00000517417 TPM1P09493 284 aa12.87□□□□□ -0.35
PCDHGA1-202ENST00000517417 HS1BP3Q53T59 392 aa12.87□□□□□ -0.35
PCDHGA1-202ENST00000517417 HOMER1Q86YM7 354 aa12.87□□□□□ -0.35
PCDHGA1-202ENST00000517417 FMNL2Q96PY5 1086 aa12.87□□□□□ -0.35
PCDHGA1-202ENST00000517417 ZNF445P59923 1031 aa12.87□□□□□ -0.35
PCDHGA1-202ENST00000517417 USP25Q9UHP3 1055 aa12.87□□□□□ -0.35
PCDHGA1-202ENST00000517417 MLH3Q9UHC1 1453 aa12.87□□□□□ -0.35
PCDHGA1-202ENST00000517417 WASLO00401 505 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms