RNA–Protein interactions for RNA: ENST00000516219.1

RN7SKP52-201, Transcript of RNA, 7SK small nuclear pseudogene 52, humanhuman

BASIC

Gene RN7SKP52, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP52-201ENST00000516219 EVC2Q86UK5 1308 aa13.23□□□□□ -0.29
RN7SKP52-201ENST00000516219 KCNQ4P56696 695 aa13.23□□□□□ -0.29
RN7SKP52-201ENST00000516219 PDCD7Q8N8D1 485 aaKnown RBP13.23□□□□□ -0.29
RN7SKP52-201ENST00000516219 NLGN2Q8NFZ4 835 aa13.23□□□□□ -0.29
RN7SKP52-201ENST00000516219 PNPLA7Q6ZV29 1317 aa13.22□□□□□ -0.29
RN7SKP52-201ENST00000516219 TTC21AQ8NDW8 1320 aa13.22□□□□□ -0.29
RN7SKP52-201ENST00000516219 NME9Q86XW9 330 aa13.22□□□□□ -0.29
RN7SKP52-201ENST00000516219 KLHL34Q8N239 644 aa13.22□□□□□ -0.29
RN7SKP52-201ENST00000516219 KCNH5Q8NCM2 988 aa13.22□□□□□ -0.29
RN7SKP52-201ENST00000516219 NSD2O96028 1365 aa13.21□□□□□ -0.29
RN7SKP52-201ENST00000516219 USP31Q70CQ4 1352 aa13.21□□□□□ -0.29
RN7SKP52-201ENST00000516219 SBNO2Q9Y2G9 1366 aa13.21□□□□□ -0.29
RN7SKP52-201ENST00000516219 MKRN3Q13064 507 aaKnown RBP13.21□□□□□ -0.29
RN7SKP52-201ENST00000516219 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.21□□□□□ -0.29
RN7SKP52-201ENST00000516219 L3MBTL2Q969R5 705 aa13.21□□□□□ -0.29
RN7SKP52-201ENST00000516219 NLRP2Q9NX02 1062 aa13.2□□□□□ -0.3
RN7SKP52-201ENST00000516219 UBR3Q6ZT12 1888 aa13.2□□□□□ -0.3
RN7SKP52-201ENST00000516219 IL2RBP14784 551 aa13.19□□□□□ -0.3
RN7SKP52-201ENST00000516219 GPR162Q16538 588 aa13.19□□□□□ -0.3
RN7SKP52-201ENST00000516219 ANKRD24Q8TF21 1146 aa13.19□□□□□ -0.3
RN7SKP52-201ENST00000516219 MEGF6O75095 1541 aa13.18□□□□□ -0.3
RN7SKP52-201ENST00000516219 HOXB1P14653 301 aaPredicted RBP13.18□□□□□ -0.3
RN7SKP52-201ENST00000516219 ROCK2O75116 1388 aaKnown RBP13.18□□□□□ -0.3
RN7SKP52-201ENST00000516219 YBX3P16989 372 aaKnown RBP eCLIP13.17□□□□□ -0.3
RN7SKP52-201ENST00000516219 SIN3AQ96ST3 1273 aa13.17□□□□□ -0.3
RN7SKP52-201ENST00000516219 KIAA1551Q9HCM1 1747 aa13.16□□□□□ -0.3
RN7SKP52-201ENST00000516219 KIF20BQ96Q89 1820 aa13.16□□□□□ -0.3
RN7SKP52-201ENST00000516219 GIGYF1O75420 1035 aaPredicted RBP13.16□□□□□ -0.3
RN7SKP52-201ENST00000516219 A0A1W2PP64 1363 aa13.16□□□□□ -0.3
RN7SKP52-201ENST00000516219 C4BP0C0L5 1744 aa13.15□□□□□ -0.3
RN7SKP52-201ENST00000516219 MAP2P11137 1827 aaKnown RBP13.15□□□□□ -0.3
RN7SKP52-201ENST00000516219 DDX54Q8TDD1 881 aaKnown RBP13.14□□□□□ -0.31
RN7SKP52-201ENST00000516219 EDC4Q6P2E9 1401 aaKnown RBP13.13□□□□□ -0.31
RN7SKP52-201ENST00000516219 ATP10DQ9P241 1426 aa13.13□□□□□ -0.31
RN7SKP52-201ENST00000516219 PKD1L3Q7Z443 1732 aa13.13□□□□□ -0.31
RN7SKP52-201ENST00000516219 ANKRD36BQ8N2N9 1353 aa13.13□□□□□ -0.31
RN7SKP52-201ENST00000516219 FBLN1P23142 703 aa13.13□□□□□ -0.31
RN7SKP52-201ENST00000516219 IFFO2Q5TF58 517 aa13.13□□□□□ -0.31
RN7SKP52-201ENST00000516219 LTV1Q96GA3 475 aaPredicted RBP13.13□□□□□ -0.31
RN7SKP52-201ENST00000516219 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.13□□□□□ -0.31
RN7SKP52-201ENST00000516219 PCDHB8Q9UN66 801 aa13.13□□□□□ -0.31
RN7SKP52-201ENST00000516219 N4BP2Q86UW6 1770 aaPredicted RBP13.12□□□□□ -0.31
RN7SKP52-201ENST00000516219 PYGBP11216 843 aa13.12□□□□□ -0.31
RN7SKP52-201ENST00000516219 MSL1Q68DK7 614 aa13.12□□□□□ -0.31
RN7SKP52-201ENST00000516219 G3V3G9 751 aa13.11□□□□□ -0.31
RN7SKP52-201ENST00000516219 HOXB3P14651 431 aaPredicted RBP13.11□□□□□ -0.31
RN7SKP52-201ENST00000516219 PRIM1P49642 420 aaKnown RBP13.11□□□□□ -0.31
RN7SKP52-201ENST00000516219 DOK7Q18PE1 504 aa13.11□□□□□ -0.31
RN7SKP52-201ENST00000516219 SLC27A3Q5K4L6 730 aa13.11□□□□□ -0.31
RN7SKP52-201ENST00000516219 VARS2Q5ST30 1063 aaKnown RBP13.11□□□□□ -0.31
RN7SKP52-201ENST00000516219 DCAF8Q5TAQ9 597 aa13.11□□□□□ -0.31
RN7SKP52-201ENST00000516219 SLC16A10Q8TF71 515 aa13.11□□□□□ -0.31
RN7SKP52-201ENST00000516219 SYTL4Q96C24 671 aaPredicted RBP13.11□□□□□ -0.31
RN7SKP52-201ENST00000516219 SLC12A5Q9H2X9 1139 aa13.11□□□□□ -0.31
RN7SKP52-201ENST00000516219 TFCP2L1Q9NZI6 479 aa13.11□□□□□ -0.31
RN7SKP52-201ENST00000516219 KIF13BQ9NQT8 1826 aa13.11□□□□□ -0.31
RN7SKP52-201ENST00000516219 ADCY9O60503 1353 aa13.1□□□□□ -0.31
RN7SKP52-201ENST00000516219 POLD1P28340 1107 aa13.1□□□□□ -0.31
RN7SKP52-201ENST00000516219 COL23A1Q86Y22 540 aaPredicted RBP13.1□□□□□ -0.31
RN7SKP52-201ENST00000516219 BRCA1P38398 1863 aaKnown RBP13.1□□□□□ -0.31
RN7SKP52-201ENST00000516219 TMC1Q8TDI8 760 aa13.09□□□□□ -0.31
RN7SKP52-201ENST00000516219 RIMBP2O15034 1052 aa13.08□□□□□ -0.32
RN7SKP52-201ENST00000516219 AMIGO3Q86WK7 504 aa13.08□□□□□ -0.32
RN7SKP52-201ENST00000516219 IP6K1Q92551 441 aa13.08□□□□□ -0.32
RN7SKP52-201ENST00000516219 MAP3K19Q56UN5 1328 aa13.08□□□□□ -0.32
RN7SKP52-201ENST00000516219 ANKRD26Q9UPS8 1709 aa13.08□□□□□ -0.32
RN7SKP52-201ENST00000516219 CICQ96RK0 1608 aaPredicted RBP13.07□□□□□ -0.32
RN7SKP52-201ENST00000516219 NEUROD1Q13562 356 aa13.07□□□□□ -0.32
RN7SKP52-201ENST00000516219 SMIM5Q71RC9 77 aa13.07□□□□□ -0.32
RN7SKP52-201ENST00000516219 USHBP1Q8N6Y0 703 aa13.07□□□□□ -0.32
RN7SKP52-201ENST00000516219 CCNL1Q9UK58 526 aaPredicted RBP13.07□□□□□ -0.32
RN7SKP52-201ENST00000516219 WWC3Q9ULE0 1092 aa13.07□□□□□ -0.32
RN7SKP52-201ENST00000516219 HOXC9P31274 260 aa13.06□□□□□ -0.32
RN7SKP52-201ENST00000516219 ZNF526Q8TF50 670 aaPredicted RBP13.05□□□□□ -0.32
RN7SKP52-201ENST00000516219 C4AP0C0L4 1744 aa13.05□□□□□ -0.32
RN7SKP52-201ENST00000516219 HDGFL2Q7Z4V5 671 aaPredicted RBP13.04□□□□□ -0.32
RN7SKP52-201ENST00000516219 COL5A3P25940 1745 aaPredicted RBP13.04□□□□□ -0.32
RN7SKP52-201ENST00000516219 WDR90Q96KV7 1748 aa13.04□□□□□ -0.32
RN7SKP52-201ENST00000516219 ZNF687Q8N1G0 1237 aa13.03□□□□□ -0.32
RN7SKP52-201ENST00000516219 ZCRB1Q8TBF4 217 aaKnown RBP13.03□□□□□ -0.32
RN7SKP52-201ENST00000516219 USP47Q96K76 1375 aa13.03□□□□□ -0.32
RN7SKP52-201ENST00000516219 RRS1Q15050 365 aaKnown RBP13.02□□□□□ -0.33
RN7SKP52-201ENST00000516219 NBPF6Q5VWK0 638 aa13.02□□□□□ -0.33
RN7SKP52-201ENST00000516219 NBPF4Q96M43 638 aa13.02□□□□□ -0.33
RN7SKP52-201ENST00000516219 CARD11Q9BXL7 1154 aa13.02□□□□□ -0.33
RN7SKP52-201ENST00000516219 GRIN3BO60391 1043 aa13.01□□□□□ -0.33
RN7SKP52-201ENST00000516219 RTL1A6NKG5 1358 aa13.01□□□□□ -0.33
RN7SKP52-201ENST00000516219 PALLDQ8WX93 1383 aa13.01□□□□□ -0.33
RN7SKP52-201ENST00000516219 ARFGEF1Q9Y6D6 1849 aa13.01□□□□□ -0.33
RN7SKP52-201ENST00000516219 PLA2G2EQ9NZK7 142 aa13□□□□□ -0.33
RN7SKP52-201ENST00000516219 MYH14Q7Z406 1995 aaKnown RBP13□□□□□ -0.33
RN7SKP52-201ENST00000516219 IGSF1Q8N6C5 1336 aa12.99□□□□□ -0.33
RN7SKP52-201ENST00000516219 HSPA6P17066 643 aa12.99□□□□□ -0.33
RN7SKP52-201ENST00000516219 AMPHP49418 695 aa12.99□□□□□ -0.33
RN7SKP52-201ENST00000516219 TESK2Q96S53 571 aa12.99□□□□□ -0.33
RN7SKP52-201ENST00000516219 GPBP1L1Q9HC44 474 aaPredicted RBP12.99□□□□□ -0.33
RN7SKP52-201ENST00000516219 TERF2IPQ9NYB0 399 aa12.99□□□□□ -0.33
RN7SKP52-201ENST00000516219 VIRMAQ69YN4 1812 aaKnown RBP12.99□□□□□ -0.33
RN7SKP52-201ENST00000516219 SBF1O95248 1867 aa12.98□□□□□ -0.33
RN7SKP52-201ENST00000516219 PCNTO95613 3336 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms