RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	5.79	□□□□□ -1.48
ATP2C1-223	ENST00000515854	ALS2	Q96Q42	1657 aa		5.79	□□□□□ -1.48
ATP2C1-223	ENST00000515854	XIRP1	Q702N8	1843 aa	Known RBP	5.79	□□□□□ -1.48
ATP2C1-223	ENST00000515854	PXDN	Q92626	1479 aa		5.79	□□□□□ -1.48
ATP2C1-223	ENST00000515854	HTATSF1	O43719	755 aa	Known RBP	5.79	□□□□□ -1.48
ATP2C1-223	ENST00000515854	NUBP1	P53384	320 aa		5.79	□□□□□ -1.48
ATP2C1-223	ENST00000515854	GSE1	Q14687	1217 aa		5.79	□□□□□ -1.48
ATP2C1-223	ENST00000515854	MTHFSD	Q2M296	383 aa	Known RBP	5.79	□□□□□ -1.48
ATP2C1-223	ENST00000515854	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	5.79	□□□□□ -1.48
ATP2C1-223	ENST00000515854	SPRYD3	Q8NCJ5	442 aa		5.79	□□□□□ -1.48
ATP2C1-223	ENST00000515854	ZNF428	Q96B54	188 aa		5.79	□□□□□ -1.48
ATP2C1-223	ENST00000515854	CFAP44	Q96MT7	982 aa		5.79	□□□□□ -1.48
ATP2C1-223	ENST00000515854	SGIP1	Q9BQI5	828 aa		5.79	□□□□□ -1.48
ATP2C1-223	ENST00000515854	THUMPD2	Q9BTF0	503 aa	Known RBP	5.79	□□□□□ -1.48
ATP2C1-223	ENST00000515854	CIZ1	Q9ULV3	898 aa	Predicted RBP	5.79	□□□□□ -1.48
ATP2C1-223	ENST00000515854	SPATA31A3	Q5VYP0	1347 aa		5.78	□□□□□ -1.48
ATP2C1-223	ENST00000515854	FAM83G	A6ND36	823 aa		5.78	□□□□□ -1.48
ATP2C1-223	ENST00000515854	CHL1	O00533	1208 aa		5.78	□□□□□ -1.48
ATP2C1-223	ENST00000515854	VAMP4	O75379	141 aa		5.78	□□□□□ -1.48
ATP2C1-223	ENST00000515854	BRPF1	P55201	1214 aa	Predicted RBP	5.78	□□□□□ -1.48
ATP2C1-223	ENST00000515854	CRB1	P82279	1406 aa		5.78	□□□□□ -1.48
ATP2C1-223	ENST00000515854	DCTN1	Q14203	1278 aa		5.78	□□□□□ -1.48
ATP2C1-223	ENST00000515854	NCAPD2	Q15021	1401 aa		5.78	□□□□□ -1.48
ATP2C1-223	ENST00000515854	MED1	Q15648	1581 aa	Predicted RBP	5.78	□□□□□ -1.48
ATP2C1-223	ENST00000515854	ALDH1L2	Q3SY69	923 aa		5.78	□□□□□ -1.48
ATP2C1-223	ENST00000515854	TNS3	Q68CZ2	1445 aa		5.78	□□□□□ -1.48
ATP2C1-223	ENST00000515854	BRINP3	Q76B58	766 aa		5.78	□□□□□ -1.48
ATP2C1-223	ENST00000515854	HS6ST3	Q8IZP7	471 aa		5.78	□□□□□ -1.48
ATP2C1-223	ENST00000515854	GAS2L2	Q8NHY3	880 aa		5.78	□□□□□ -1.48
ATP2C1-223	ENST00000515854	SSH1	Q8WYL5	1049 aa		5.78	□□□□□ -1.48
ATP2C1-223	ENST00000515854	DDX17	Q92841	729 aa	Known RBP	5.78	□□□□□ -1.48
ATP2C1-223	ENST00000515854	TSHZ2	Q9NRE2	1034 aa		5.78	□□□□□ -1.48
ATP2C1-223	ENST00000515854	MBIP	Q9NS73	344 aa		5.78	□□□□□ -1.48
ATP2C1-223	ENST00000515854	AAMP	Q13685	434 aa		5.77	□□□□□ -1.49
ATP2C1-223	ENST00000515854	NBPF6	Q5VWK0	638 aa		5.77	□□□□□ -1.49
ATP2C1-223	ENST00000515854	ZKSCAN2	Q63HK3	967 aa		5.77	□□□□□ -1.49
ATP2C1-223	ENST00000515854	LMOD2	Q6P5Q4	547 aa		5.77	□□□□□ -1.49
ATP2C1-223	ENST00000515854	FRAT1	Q92837	279 aa	Predicted RBP	5.77	□□□□□ -1.49
ATP2C1-223	ENST00000515854	LTV1	Q96GA3	475 aa	Predicted RBP	5.77	□□□□□ -1.49
ATP2C1-223	ENST00000515854	L3MBTL3	Q96JM7	780 aa	Predicted RBP	5.77	□□□□□ -1.49
ATP2C1-223	ENST00000515854	NBPF4	Q96M43	638 aa		5.77	□□□□□ -1.49
ATP2C1-223	ENST00000515854	SLAIN2	Q9P270	581 aa		5.77	□□□□□ -1.49
ATP2C1-223	ENST00000515854	LAS1L	Q9Y4W2	734 aa	Known RBP	5.77	□□□□□ -1.49
ATP2C1-223	ENST00000515854	LTN1	O94822	1766 aa		5.77	□□□□□ -1.49
ATP2C1-223	ENST00000515854	SOS2	Q07890	1332 aa	Predicted RBP	5.76	□□□□□ -1.49
ATP2C1-223	ENST00000515854	MS4A1	P11836	297 aa		5.76	□□□□□ -1.49
ATP2C1-223	ENST00000515854	CANX	P27824	592 aa	Known RBP	5.76	□□□□□ -1.49
ATP2C1-223	ENST00000515854	LSM11	P83369	360 aa	Known RBP eCLIP	5.76	□□□□□ -1.49
ATP2C1-223	ENST00000515854	MCM10	Q7L590	875 aa		5.76	□□□□□ -1.49
ATP2C1-223	ENST00000515854	TSPYL6	Q8N831	410 aa		5.76	□□□□□ -1.49
ATP2C1-223	ENST00000515854	C8orf58	Q8NAV2	365 aa		5.76	□□□□□ -1.49
ATP2C1-223	ENST00000515854	PANK1	Q8TE04	598 aa		5.76	□□□□□ -1.49
ATP2C1-223	ENST00000515854	ANKRD24	Q8TF21	1146 aa		5.76	□□□□□ -1.49
ATP2C1-223	ENST00000515854	RTF1	Q92541	710 aa	Known RBP	5.76	□□□□□ -1.49
ATP2C1-223	ENST00000515854	BCL2L13	Q9BXK5	485 aa		5.76	□□□□□ -1.49
ATP2C1-223	ENST00000515854	SMC4	Q9NTJ3	1288 aa		5.76	□□□□□ -1.49
ATP2C1-223	ENST00000515854	TNN	Q9UQP3	1299 aa		5.76	□□□□□ -1.49
ATP2C1-223	ENST00000515854	AXIN2	Q9Y2T1	843 aa		5.76	□□□□□ -1.49
ATP2C1-223	ENST00000515854	KIAA0232	Q92628	1395 aa		5.76	□□□□□ -1.49
ATP2C1-223	ENST00000515854	DLG5	Q8TDM6	1919 aa		5.76	□□□□□ -1.49
ATP2C1-223	ENST00000515854	CAMTA1	Q9Y6Y1	1673 aa		5.75	□□□□□ -1.49
ATP2C1-223	ENST00000515854	KDM2B	Q8NHM5	1336 aa		5.75	□□□□□ -1.49
ATP2C1-223	ENST00000515854	KIF16B	Q96L93	1317 aa		5.75	□□□□□ -1.49
ATP2C1-223	ENST00000515854	ABCC6	O95255	1503 aa		5.75	□□□□□ -1.49
ATP2C1-223	ENST00000515854	ZBTB7C	A1YPR0	619 aa		5.75	□□□□□ -1.49
ATP2C1-223	ENST00000515854	GNAT3	A8MTJ3	354 aa		5.75	□□□□□ -1.49
ATP2C1-223	ENST00000515854	IPO8	O15397	1037 aa	Known RBP	5.75	□□□□□ -1.49
ATP2C1-223	ENST00000515854	RLBP1	P12271	317 aa		5.75	□□□□□ -1.49
ATP2C1-223	ENST00000515854	ZC3H6	P61129	1189 aa	Known RBP	5.75	□□□□□ -1.49
ATP2C1-223	ENST00000515854	DOK7	Q18PE1	504 aa		5.75	□□□□□ -1.49
ATP2C1-223	ENST00000515854	TWISTNB	Q3B726	338 aa	Predicted RBP	5.75	□□□□□ -1.49
ATP2C1-223	ENST00000515854	ATF7IP	Q6VMQ6	1270 aa		5.75	□□□□□ -1.49
ATP2C1-223	ENST00000515854	DZIP1L	Q8IYY4	767 aa	Known RBP	5.75	□□□□□ -1.49
ATP2C1-223	ENST00000515854	MRPL50	Q8N5N7	158 aa	Known RBP	5.75	□□□□□ -1.49
ATP2C1-223	ENST00000515854	USHBP1	Q8N6Y0	703 aa		5.75	□□□□□ -1.49
ATP2C1-223	ENST00000515854	IL17RE	Q8NFR9	667 aa		5.75	□□□□□ -1.49
ATP2C1-223	ENST00000515854	ARHGAP45	Q92619	1136 aa		5.75	□□□□□ -1.49
ATP2C1-223	ENST00000515854	LRRC59	Q96AG4	307 aa	Known RBP	5.75	□□□□□ -1.49
ATP2C1-223	ENST00000515854	BABAM1	Q9NWV8	329 aa		5.75	□□□□□ -1.49
ATP2C1-223	ENST00000515854	NOB1	Q9ULX3	412 aa	Known RBP	5.75	□□□□□ -1.49
ATP2C1-223	ENST00000515854	COG6	Q9Y2V7	657 aa		5.75	□□□□□ -1.49
ATP2C1-223	ENST00000515854	CPD	O75976	1380 aa		5.75	□□□□□ -1.49
ATP2C1-223	ENST00000515854	MAP3K5	Q99683	1374 aa		5.75	□□□□□ -1.49
ATP2C1-223	ENST00000515854	LMO7	Q8WWI1	1683 aa		5.75	□□□□□ -1.49
ATP2C1-223	ENST00000515854	LRRC37A3	O60309	1634 aa		5.74	□□□□□ -1.49
ATP2C1-223	ENST00000515854	CRYBG1	Q9Y4K1	1723 aa		5.74	□□□□□ -1.49
ATP2C1-223	ENST00000515854	CHRM1	P11229	460 aa	Predicted RBP	5.74	□□□□□ -1.49
ATP2C1-223	ENST00000515854	TRIM27	P14373	513 aa		5.74	□□□□□ -1.49
ATP2C1-223	ENST00000515854	MVP	Q14764	893 aa	Known RBP	5.74	□□□□□ -1.49
ATP2C1-223	ENST00000515854	AMOT	Q4VCS5	1084 aa		5.74	□□□□□ -1.49
ATP2C1-223	ENST00000515854	PLEKHO1	Q53GL0	409 aa	Predicted RBP	5.74	□□□□□ -1.49
ATP2C1-223	ENST00000515854	TRAF7	Q6Q0C0	670 aa		5.74	□□□□□ -1.49
ATP2C1-223	ENST00000515854	CENPQ	Q7L2Z9	268 aa	Predicted RBP	5.74	□□□□□ -1.49
ATP2C1-223	ENST00000515854	CLUAP1	Q96AJ1	413 aa		5.74	□□□□□ -1.49
ATP2C1-223	ENST00000515854	RNF25	Q96BH1	459 aa	Predicted RBP	5.74	□□□□□ -1.49
ATP2C1-223	ENST00000515854	TAOK2	Q9UL54	1235 aa		5.74	□□□□□ -1.49
ATP2C1-223	ENST00000515854	PLEKHG2	Q9H7P9	1386 aa		5.74	□□□□□ -1.49
ATP2C1-223	ENST00000515854	COL18A1	P39060	1754 aa		5.74	□□□□□ -1.49
ATP2C1-223	ENST00000515854	CEMIP	Q8WUJ3	1361 aa		5.73	□□□□□ -1.49
ATP2C1-223	ENST00000515854	ELL2	O00472	640 aa	Predicted RBP	5.73	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms