RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 CCDC192P0DO97 292 aa12.89□□□□□ -0.35
TRIM41-209ENST00000515834 SLC52A1Q9NWF4 448 aa12.89□□□□□ -0.35
TRIM41-209ENST00000515834 FERMT2Q96AC1 680 aa12.89□□□□□ -0.35
TRIM41-209ENST00000515834 CEP131Q9UPN4 1083 aa12.89□□□□□ -0.35
TRIM41-209ENST00000515834 BOLA2Q9H3K6 86 aa12.88□□□□□ -0.35
TRIM41-209ENST00000515834 EHMT1Q9H9B1 1298 aa12.88□□□□□ -0.35
TRIM41-209ENST00000515834 SAMM50Q9Y512 469 aa12.88□□□□□ -0.35
TRIM41-209ENST00000515834 HMGN5P82970 282 aaKnown RBP12.88□□□□□ -0.35
TRIM41-209ENST00000515834 SLF2Q8IX21 1173 aa12.88□□□□□ -0.35
TRIM41-209ENST00000515834 TRAK2O60296 914 aa12.88□□□□□ -0.35
TRIM41-209ENST00000515834 CTNNBL1Q8WYA6 563 aaPredicted RBP12.88□□□□□ -0.35
TRIM41-209ENST00000515834 MACROD2A1Z1Q3 448 aa12.88□□□□□ -0.35
TRIM41-209ENST00000515834 CASTP20810 708 aaKnown RBP12.88□□□□□ -0.35
TRIM41-209ENST00000515834 CETN2P41208 172 aa12.88□□□□□ -0.35
TRIM41-209ENST00000515834 CBFA2T2O43439 604 aa12.88□□□□□ -0.35
TRIM41-209ENST00000515834 MYO1BO43795 1136 aa12.88□□□□□ -0.35
TRIM41-209ENST00000515834 TNNT1P13805 278 aa12.88□□□□□ -0.35
TRIM41-209ENST00000515834 MAP3K9P80192 1104 aa12.88□□□□□ -0.35
TRIM41-209ENST00000515834 MAP3K12Q12852 859 aa12.87□□□□□ -0.35
TRIM41-209ENST00000515834 TSG101Q99816 390 aa12.87□□□□□ -0.35
TRIM41-209ENST00000515834 KLHL10Q6JEL2 608 aa12.87□□□□□ -0.35
TRIM41-209ENST00000515834 ZNF397Q8NF99 534 aaPredicted RBP12.87□□□□□ -0.35
TRIM41-209ENST00000515834 CTCFLQ8NI51 663 aaPredicted RBP12.87□□□□□ -0.35
TRIM41-209ENST00000515834 ANKRD18BA2A2Z9 1011 aa12.86□□□□□ -0.35
TRIM41-209ENST00000515834 DDX46Q7L014 1031 aaKnown RBP12.86□□□□□ -0.35
TRIM41-209ENST00000515834 ST5P78524 1137 aa12.86□□□□□ -0.35
TRIM41-209ENST00000515834 ZBTB3Q9H5J0 574 aa12.86□□□□□ -0.35
TRIM41-209ENST00000515834 CWC15Q9P013 229 aaKnown RBP12.86□□□□□ -0.35
TRIM41-209ENST00000515834 EXOC6BQ9Y2D4 811 aa12.86□□□□□ -0.35
TRIM41-209ENST00000515834 LEKR1Q6ZMV7 388 aa12.86□□□□□ -0.35
TRIM41-209ENST00000515834 WDR33Q9C0J8 1336 aaKnown RBP12.86□□□□□ -0.35
TRIM41-209ENST00000515834 CABP5Q9NP86 173 aa12.86□□□□□ -0.35
TRIM41-209ENST00000515834 DUSP27Q5VZP5 1158 aa12.86□□□□□ -0.35
TRIM41-209ENST00000515834 LARP1Q6PKG0 1096 aaKnown RBP12.86□□□□□ -0.35
TRIM41-209ENST00000515834 EPB41L2O43491 1005 aaKnown RBP12.86□□□□□ -0.35
TRIM41-209ENST00000515834 DNA2P51530 1060 aa12.86□□□□□ -0.35
TRIM41-209ENST00000515834 ACSBG1Q96GR2 724 aa12.86□□□□□ -0.35
TRIM41-209ENST00000515834 CCDC113Q9H0I3 377 aa12.86□□□□□ -0.35
TRIM41-209ENST00000515834 UBAP1LF5GYI3 381 aa12.85□□□□□ -0.35
TRIM41-209ENST00000515834 GUCY1B3Q02153 619 aa12.85□□□□□ -0.35
TRIM41-209ENST00000515834 HSP90AB3PQ58FF7 597 aa12.85□□□□□ -0.35
TRIM41-209ENST00000515834 SPTY2D1Q68D10 685 aaPredicted RBP12.85□□□□□ -0.35
TRIM41-209ENST00000515834 SMARCA4P51532 1647 aa12.85□□□□□ -0.35
TRIM41-209ENST00000515834 CEBPAP49715 358 aaPredicted RBP12.85□□□□□ -0.35
TRIM41-209ENST00000515834 KRT32Q14532 448 aa12.85□□□□□ -0.35
TRIM41-209ENST00000515834 THUMPD2Q9BTF0 503 aaKnown RBP12.85□□□□□ -0.35
TRIM41-209ENST00000515834 PUF60Q9UHX1 559 aaKnown RBP12.85□□□□□ -0.35
TRIM41-209ENST00000515834 CFAP45Q9UL16 551 aa12.85□□□□□ -0.35
TRIM41-209ENST00000515834 F8W031 263 aaPredicted RBP12.85□□□□□ -0.35
TRIM41-209ENST00000515834 IQCA1Q86XH1 822 aa12.85□□□□□ -0.35
TRIM41-209ENST00000515834 NLRP5P59047 1200 aa12.85□□□□□ -0.35
TRIM41-209ENST00000515834 BRD4O60885 1362 aaPredicted RBP12.85□□□□□ -0.35
TRIM41-209ENST00000515834 TMEM266Q2M3C6 531 aa12.84□□□□□ -0.35
TRIM41-209ENST00000515834 ATF7IPQ6VMQ6 1270 aa12.84□□□□□ -0.35
TRIM41-209ENST00000515834 CACNA2D4Q7Z3S7 1137 aa12.84□□□□□ -0.35
TRIM41-209ENST00000515834 U3KPZ7 1027 aaPredicted RBP12.84□□□□□ -0.35
TRIM41-209ENST00000515834 CHD1LQ86WJ1 897 aa12.84□□□□□ -0.35
TRIM41-209ENST00000515834 ZNF354CQ86Y25 554 aa12.84□□□□□ -0.35
TRIM41-209ENST00000515834 UPF3BQ9BZI7 483 aaKnown RBP12.84□□□□□ -0.35
TRIM41-209ENST00000515834 CCDC8Q9H0W5 538 aaPredicted RBP12.84□□□□□ -0.35
TRIM41-209ENST00000515834 SMARCA5O60264 1052 aaPredicted RBP12.84□□□□□ -0.35
TRIM41-209ENST00000515834 USP8P40818 1118 aa12.84□□□□□ -0.35
TRIM41-209ENST00000515834 SLC12A7Q9Y666 1083 aa12.84□□□□□ -0.35
TRIM41-209ENST00000515834 CTNNA2P26232 953 aa12.83□□□□□ -0.36
TRIM41-209ENST00000515834 CAMK4Q16566 473 aa12.83□□□□□ -0.36
TRIM41-209ENST00000515834 CCDC144CPQ8IYA2 1237 aa12.83□□□□□ -0.36
TRIM41-209ENST00000515834 C8orf37Q96NL8 207 aa12.83□□□□□ -0.36
TRIM41-209ENST00000515834 PODXL2Q9NZ53 605 aa12.83□□□□□ -0.36
TRIM41-209ENST00000515834 RBM26Q5T8P6 1007 aaKnown RBP12.83□□□□□ -0.36
TRIM41-209ENST00000515834 NCOA2Q15596 1464 aa12.83□□□□□ -0.36
TRIM41-209ENST00000515834 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.83□□□□□ -0.36
TRIM41-209ENST00000515834 GOPCQ9HD26 462 aa12.83□□□□□ -0.36
TRIM41-209ENST00000515834 KIAA0754O94854 1291 aa12.83□□□□□ -0.36
TRIM41-209ENST00000515834 BAG4O95429 457 aaKnown RBP12.83□□□□□ -0.36
TRIM41-209ENST00000515834 CKAP2LQ8IYA6 745 aa12.83□□□□□ -0.36
TRIM41-209ENST00000515834 MRE11P49959 708 aa12.83□□□□□ -0.36
TRIM41-209ENST00000515834 IGF1RP08069 1367 aa12.83□□□□□ -0.36
TRIM41-209ENST00000515834 CCDC178Q5BJE1 867 aa12.82□□□□□ -0.36
TRIM41-209ENST00000515834 KRT28Q7Z3Y7 464 aa12.82□□□□□ -0.36
TRIM41-209ENST00000515834 MPHOSPH6Q99547 160 aaKnown RBP12.82□□□□□ -0.36
TRIM41-209ENST00000515834 CCDC91Q7Z6B0 441 aa12.82□□□□□ -0.36
TRIM41-209ENST00000515834 BICD1Q96G01 975 aa12.82□□□□□ -0.36
TRIM41-209ENST00000515834 HLA-DOAP06340 250 aa12.82□□□□□ -0.36
TRIM41-209ENST00000515834 CFAP100Q494V2 611 aa12.82□□□□□ -0.36
TRIM41-209ENST00000515834 FKBP15Q5T1M5 1219 aa12.82□□□□□ -0.36
TRIM41-209ENST00000515834 GOLGA6L7A0A1B0GV03 622 aa12.82□□□□□ -0.36
TRIM41-209ENST00000515834 ZNF213O14771 459 aa12.82□□□□□ -0.36
TRIM41-209ENST00000515834 GRIPAP1Q4V328 841 aa12.82□□□□□ -0.36
TRIM41-209ENST00000515834 IQCEQ6IPM2 695 aa12.82□□□□□ -0.36
TRIM41-209ENST00000515834 PRPF40BQ6NWY9 871 aaKnown RBP12.82□□□□□ -0.36
TRIM41-209ENST00000515834 FILIP1Q7Z7B0 1213 aa12.82□□□□□ -0.36
TRIM41-209ENST00000515834 HOMER2Q9NSB8 354 aa12.82□□□□□ -0.36
TRIM41-209ENST00000515834 BIN2Q9UBW5 565 aaPredicted RBP12.82□□□□□ -0.36
TRIM41-209ENST00000515834 CCDC61Q9Y6R9 512 aa12.82□□□□□ -0.36
TRIM41-209ENST00000515834 GSTTP1A0A1W2PQM5 241 aa12.82□□□□□ -0.36
TRIM41-209ENST00000515834 PLS1Q14651 629 aa12.82□□□□□ -0.36
TRIM41-209ENST00000515834 RAB34Q9BZG1 259 aa12.82□□□□□ -0.36
TRIM41-209ENST00000515834 PABPN1LA6NDY0 278 aaKnown RBP12.82□□□□□ -0.36
TRIM41-209ENST00000515834 IFIT3O14879 490 aaKnown RBP12.82□□□□□ -0.36
TRIM41-209ENST00000515834 SYCP3Q8IZU3 236 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms