RNA–Protein interactions for RNA: ENST00000514168.1

SMAD1-212, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-212ENST00000514168 AMIGO3Q86WK7 504 aa15.77■□□□□ 0.12
SMAD1-212ENST00000514168 PNNQ9H307 717 aaKnown RBP15.77■□□□□ 0.12
SMAD1-212ENST00000514168 KDRP35968 1356 aa15.76■□□□□ 0.11
SMAD1-212ENST00000514168 CYP27B1O15528 508 aa15.76■□□□□ 0.11
SMAD1-212ENST00000514168 FCHSD2O94868 740 aa15.76■□□□□ 0.11
SMAD1-212ENST00000514168 FAM9BQ8IZU0 186 aa15.76■□□□□ 0.11
SMAD1-212ENST00000514168 ADAMTS8Q9UP79 889 aa15.76■□□□□ 0.11
SMAD1-212ENST00000514168 AEBP1Q8IUX7 1158 aa15.75■□□□□ 0.11
SMAD1-212ENST00000514168 RAPGEF4Q8WZA2 1011 aa15.75■□□□□ 0.11
SMAD1-212ENST00000514168 MSL1Q68DK7 614 aa15.74■□□□□ 0.11
SMAD1-212ENST00000514168 PELP1Q8IZL8 1130 aaKnown RBP15.74■□□□□ 0.11
SMAD1-212ENST00000514168 RSPH6AQ9H0K4 717 aa15.74■□□□□ 0.11
SMAD1-212ENST00000514168 PALLDQ8WX93 1383 aa15.74■□□□□ 0.11
SMAD1-212ENST00000514168 CEP350Q5VT06 3117 aa15.73■□□□□ 0.11
SMAD1-212ENST00000514168 GIGYF1O75420 1035 aaPredicted RBP15.73■□□□□ 0.11
SMAD1-212ENST00000514168 NEFMP07197 916 aa15.73■□□□□ 0.11
SMAD1-212ENST00000514168 TATP17735 454 aaPredicted RBP15.73■□□□□ 0.11
SMAD1-212ENST00000514168 PRKAR2BP31323 418 aa15.73■□□□□ 0.11
SMAD1-212ENST00000514168 ADCY9O60503 1353 aa15.73■□□□□ 0.11
SMAD1-212ENST00000514168 PCDH11XQ9BZA7 1347 aa15.72■□□□□ 0.11
SMAD1-212ENST00000514168 PCDH11YQ9BZA8 1340 aa15.72■□□□□ 0.11
SMAD1-212ENST00000514168 GRIN3BO60391 1043 aa15.71■□□□□ 0.11
SMAD1-212ENST00000514168 SMIM5Q71RC9 77 aa15.71■□□□□ 0.11
SMAD1-212ENST00000514168 CD2APQ9Y5K6 639 aa15.71■□□□□ 0.11
SMAD1-212ENST00000514168 PLEKHG2Q9H7P9 1386 aa15.71■□□□□ 0.11
SMAD1-212ENST00000514168 ATP10DQ9P241 1426 aa15.7■□□□□ 0.1
SMAD1-212ENST00000514168 NKX1-1Q15270 411 aaPredicted RBP15.7■□□□□ 0.1
SMAD1-212ENST00000514168 RUNDC1Q96C34 613 aa15.7■□□□□ 0.1
SMAD1-212ENST00000514168 PLEKHF1Q96S99 279 aa15.7■□□□□ 0.1
SMAD1-212ENST00000514168 KIAA1551Q9HCM1 1747 aa15.7■□□□□ 0.1
SMAD1-212ENST00000514168 MAPK8IP3Q9UPT6 1336 aa15.69■□□□□ 0.1
SMAD1-212ENST00000514168 DLG5Q8TDM6 1919 aa15.69■□□□□ 0.1
SMAD1-212ENST00000514168 MSH5O43196 834 aa15.69■□□□□ 0.1
SMAD1-212ENST00000514168 PLEKHO1Q53GL0 409 aaPredicted RBP15.69■□□□□ 0.1
SMAD1-212ENST00000514168 MPRIPQ6WCQ1 1025 aa15.69■□□□□ 0.1
SMAD1-212ENST00000514168 CCDC146Q8IYE0 955 aa15.69■□□□□ 0.1
SMAD1-212ENST00000514168 KIF13BQ9NQT8 1826 aa15.68■□□□□ 0.1
SMAD1-212ENST00000514168 AMOTQ4VCS5 1084 aa15.68■□□□□ 0.1
SMAD1-212ENST00000514168 PIGBQ92521 554 aa15.68■□□□□ 0.1
SMAD1-212ENST00000514168 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.68■□□□□ 0.1
SMAD1-212ENST00000514168 SPG7Q9UQ90 795 aa15.68■□□□□ 0.1
SMAD1-212ENST00000514168 FLAD1Q8NFF5 587 aa15.67■□□□□ 0.1
SMAD1-212ENST00000514168 PHACTR3Q96KR7 559 aa15.67■□□□□ 0.1
SMAD1-212ENST00000514168 VIRMAQ69YN4 1812 aaKnown RBP15.66■□□□□ 0.1
SMAD1-212ENST00000514168 CICQ96RK0 1608 aaPredicted RBP15.66■□□□□ 0.1
SMAD1-212ENST00000514168 LINC00116Q8NCU8 138 aa15.66■□□□□ 0.1
SMAD1-212ENST00000514168 GAS2L2Q8NHY3 880 aa15.65■□□□□ 0.1
SMAD1-212ENST00000514168 SMARCC1Q92922 1105 aaPredicted RBP15.65■□□□□ 0.1
SMAD1-212ENST00000514168 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.64■□□□□ 0.09
SMAD1-212ENST00000514168 ITPK1Q13572 414 aa15.64■□□□□ 0.09
SMAD1-212ENST00000514168 MTHFSDQ2M296 383 aaKnown RBP15.64■□□□□ 0.09
SMAD1-212ENST00000514168 ZNF831Q5JPB2 1677 aa15.63■□□□□ 0.09
SMAD1-212ENST00000514168 LOC102724428A0A0B4J2F2 783 aa15.63■□□□□ 0.09
SMAD1-212ENST00000514168 APAF1O14727 1248 aa15.63■□□□□ 0.09
SMAD1-212ENST00000514168 SIK1P57059 783 aa15.63■□□□□ 0.09
SMAD1-212ENST00000514168 NFE2L2Q16236 605 aa15.63■□□□□ 0.09
SMAD1-212ENST00000514168 ZNF530Q6P9A1 599 aaPredicted RBP15.63■□□□□ 0.09
SMAD1-212ENST00000514168 BRCA1P38398 1863 aaKnown RBP15.63■□□□□ 0.09
SMAD1-212ENST00000514168 COL5A3P25940 1745 aaPredicted RBP15.63■□□□□ 0.09
SMAD1-212ENST00000514168 N4BP2Q86UW6 1770 aaPredicted RBP15.62■□□□□ 0.09
SMAD1-212ENST00000514168 MYH14Q7Z406 1995 aaKnown RBP15.62■□□□□ 0.09
SMAD1-212ENST00000514168 SSFA2P28290 1259 aa15.62■□□□□ 0.09
SMAD1-212ENST00000514168 TMPOP42166 694 aaKnown RBP15.62■□□□□ 0.09
SMAD1-212ENST00000514168 C1orf141Q5JVX7 400 aa15.62■□□□□ 0.09
SMAD1-212ENST00000514168 AK7Q96M32 723 aa15.62■□□□□ 0.09
SMAD1-212ENST00000514168 ASAP1Q9ULH1 1129 aa15.62■□□□□ 0.09
SMAD1-212ENST00000514168 HMGB2P26583 209 aaKnown RBP15.61■□□□□ 0.09
SMAD1-212ENST00000514168 AKAP4Q5JQC9 854 aa15.61■□□□□ 0.09
SMAD1-212ENST00000514168 IFNL2Q8IZJ0 200 aa15.61■□□□□ 0.09
SMAD1-212ENST00000514168 SCN11AQ9UI33 1791 aa15.61■□□□□ 0.09
SMAD1-212ENST00000514168 PHF14O94880 888 aa15.6■□□□□ 0.09
SMAD1-212ENST00000514168 PHKG2P15735 406 aa15.6■□□□□ 0.09
SMAD1-212ENST00000514168 RIPK4P57078 832 aa15.6■□□□□ 0.09
SMAD1-212ENST00000514168 IFFO2Q5TF58 517 aa15.6■□□□□ 0.09
SMAD1-212ENST00000514168 NGEFQ8N5V2 710 aa15.6■□□□□ 0.09
SMAD1-212ENST00000514168 SLC4A9Q96Q91 983 aa15.6■□□□□ 0.09
SMAD1-212ENST00000514168 GNAT3A8MTJ3 354 aa15.59■□□□□ 0.09
SMAD1-212ENST00000514168 HSP90AB1P08238 724 aaKnown RBP15.59■□□□□ 0.09
SMAD1-212ENST00000514168 NEUROD2Q15784 382 aa15.59■□□□□ 0.09
SMAD1-212ENST00000514168 ATG3Q9NT62 314 aa15.59■□□□□ 0.09
SMAD1-212ENST00000514168 RRP7AQ9Y3A4 280 aaKnown RBP15.59■□□□□ 0.09
SMAD1-212ENST00000514168 PXDNLA1KZ92 1463 aa15.59■□□□□ 0.09
SMAD1-212ENST00000514168 C4AP0C0L4 1744 aa15.58■□□□□ 0.08
SMAD1-212ENST00000514168 HTATSF1O43719 755 aaKnown RBP15.58■□□□□ 0.08
SMAD1-212ENST00000514168 LMOD3Q0VAK6 560 aa15.58■□□□□ 0.08
SMAD1-212ENST00000514168 NCBP3Q53F19 620 aaKnown RBP15.58■□□□□ 0.08
SMAD1-212ENST00000514168 RTF1Q92541 710 aaKnown RBP15.58■□□□□ 0.08
SMAD1-212ENST00000514168 GPBP1L1Q9HC44 474 aaPredicted RBP15.58■□□□□ 0.08
SMAD1-212ENST00000514168 WWC3Q9ULE0 1092 aa15.58■□□□□ 0.08
SMAD1-212ENST00000514168 ADAMTS7Q9UKP4 1686 aa15.57■□□□□ 0.08
SMAD1-212ENST00000514168 KIF3CO14782 793 aa15.57■□□□□ 0.08
SMAD1-212ENST00000514168 TMOD3Q9NYL9 352 aa15.57■□□□□ 0.08
SMAD1-212ENST00000514168 GNPATO15228 680 aa15.56■□□□□ 0.08
SMAD1-212ENST00000514168 HSPA6P17066 643 aa15.56■□□□□ 0.08
SMAD1-212ENST00000514168 HNRNPUQ00839 825 aaKnown RBP eCLIP15.56■□□□□ 0.08
SMAD1-212ENST00000514168 DCAF5Q96JK2 942 aa15.56■□□□□ 0.08
SMAD1-212ENST00000514168 C10orf71Q711Q0 1435 aa15.56■□□□□ 0.08
SMAD1-212ENST00000514168 ATP6V1AP38606 617 aa15.55■□□□□ 0.08
SMAD1-212ENST00000514168 CCDC27Q2M243 656 aa15.55■□□□□ 0.08
SMAD1-212ENST00000514168 ZNF526Q8TF50 670 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms