RNA–Protein interactions for RNA: ENST00000513588.5

CTNND2-215, Transcript of catenin delta 2, humanhuman

TSL 1 (best)

Gene CTNND2, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-215ENST00000513588 KIF24Q5T7B8 1368 aa13.87□□□□□ -0.19
CTNND2-215ENST00000513588 ZKSCAN1P17029 563 aaPredicted RBP13.86□□□□□ -0.19
CTNND2-215ENST00000513588 ESYT1Q9BSJ8 1104 aa13.86□□□□□ -0.19
CTNND2-215ENST00000513588 RTL1A6NKG5 1358 aa13.86□□□□□ -0.19
CTNND2-215ENST00000513588 TNRQ92752 1358 aa13.86□□□□□ -0.19
CTNND2-215ENST00000513588 USHBP1Q8N6Y0 703 aa13.86□□□□□ -0.19
CTNND2-215ENST00000513588 TSPY26PQ9H489 355 aa13.86□□□□□ -0.19
CTNND2-215ENST00000513588 WDR33Q9C0J8 1336 aaKnown RBP13.86□□□□□ -0.19
CTNND2-215ENST00000513588 VPS37CA5D8V6 355 aaPredicted RBP13.85□□□□□ -0.19
CTNND2-215ENST00000513588 CEBPAP49715 358 aaPredicted RBP13.85□□□□□ -0.19
CTNND2-215ENST00000513588 PSME1Q06323 249 aa13.85□□□□□ -0.19
CTNND2-215ENST00000513588 KIF2CQ99661 725 aa13.85□□□□□ -0.19
CTNND2-215ENST00000513588 EYA1Q99502 592 aa13.85□□□□□ -0.19
CTNND2-215ENST00000513588 USP32Q8NFA0 1604 aa13.85□□□□□ -0.19
CTNND2-215ENST00000513588 ALKQ9UM73 1620 aa13.85□□□□□ -0.19
CTNND2-215ENST00000513588 CCDC39Q9UFE4 941 aa13.85□□□□□ -0.19
CTNND2-215ENST00000513588 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.85□□□□□ -0.19
CTNND2-215ENST00000513588 CDK12Q9NYV4 1490 aaPredicted RBP13.84□□□□□ -0.19
CTNND2-215ENST00000513588 CWC27Q6UX04 472 aaKnown RBP13.84□□□□□ -0.19
CTNND2-215ENST00000513588 NAP1L2Q9ULW6 460 aaPredicted RBP13.84□□□□□ -0.19
CTNND2-215ENST00000513588 FRMPD1Q5SYB0 1578 aa13.84□□□□□ -0.19
CTNND2-215ENST00000513588 ARHGEF40Q8TER5 1519 aa13.84□□□□□ -0.19
CTNND2-215ENST00000513588 KIAA0232Q92628 1395 aa13.84□□□□□ -0.19
CTNND2-215ENST00000513588 TPM2P07951 284 aa13.84□□□□□ -0.19
CTNND2-215ENST00000513588 ATP8B2P98198 1209 aa13.84□□□□□ -0.19
CTNND2-215ENST00000513588 PKP1Q13835 747 aa13.84□□□□□ -0.19
CTNND2-215ENST00000513588 FIBPO43427 364 aa13.84□□□□□ -0.19
CTNND2-215ENST00000513588 GDPD2Q9HCC8 539 aa13.84□□□□□ -0.19
CTNND2-215ENST00000513588 COL3A1P02461 1466 aaPredicted RBP13.83□□□□□ -0.19
CTNND2-215ENST00000513588 KIF1BPQ96EK5 621 aa13.83□□□□□ -0.19
CTNND2-215ENST00000513588 FAM13BQ9NYF5 915 aa13.83□□□□□ -0.19
CTNND2-215ENST00000513588 CHMP3Q9Y3E7 222 aa13.83□□□□□ -0.19
CTNND2-215ENST00000513588 FLT4P35916 1363 aa13.83□□□□□ -0.2
CTNND2-215ENST00000513588 PRIM1P49642 420 aaKnown RBP13.83□□□□□ -0.2
CTNND2-215ENST00000513588 ADGRB2O60241 1585 aa13.83□□□□□ -0.2
CTNND2-215ENST00000513588 TTC21AQ8NDW8 1320 aa13.83□□□□□ -0.2
CTNND2-215ENST00000513588 AIMP1Q12904 312 aaKnown RBP13.83□□□□□ -0.2
CTNND2-215ENST00000513588 G3BP1Q13283 466 aaKnown RBP eCLIP13.83□□□□□ -0.2
CTNND2-215ENST00000513588 PPP1R42Q7Z4L9 355 aa13.83□□□□□ -0.2
CTNND2-215ENST00000513588 ARHGEF28Q8N1W1 1705 aaKnown RBP13.83□□□□□ -0.2
CTNND2-215ENST00000513588 PIK3C2BO00750 1634 aa13.82□□□□□ -0.2
CTNND2-215ENST00000513588 DRC7Q8IY82 874 aa13.82□□□□□ -0.2
CTNND2-215ENST00000513588 PRR36Q9H6K5 1346 aa13.82□□□□□ -0.2
CTNND2-215ENST00000513588 RAB11FIP3O75154 756 aa13.82□□□□□ -0.2
CTNND2-215ENST00000513588 ZNF530Q6P9A1 599 aaPredicted RBP13.82□□□□□ -0.2
CTNND2-215ENST00000513588 MPNDQ8N594 471 aa13.82□□□□□ -0.2
CTNND2-215ENST00000513588 THEMISQ8N1K5 641 aaPredicted RBP13.82□□□□□ -0.2
CTNND2-215ENST00000513588 DIP2CQ9Y2E4 1556 aa13.82□□□□□ -0.2
CTNND2-215ENST00000513588 LARP6Q9BRS8 491 aaKnown RBP13.81□□□□□ -0.2
CTNND2-215ENST00000513588 LMBRD1Q9NUN5 540 aa13.81□□□□□ -0.2
CTNND2-215ENST00000513588 CHMLP26374 656 aa13.81□□□□□ -0.2
CTNND2-215ENST00000513588 CHAF1AQ13111 956 aaPredicted RBP13.81□□□□□ -0.2
CTNND2-215ENST00000513588 IFT172Q9UG01 1749 aa13.81□□□□□ -0.2
CTNND2-215ENST00000513588 PNMA6EA0A0J9YXQ4 647 aa13.81□□□□□ -0.2
CTNND2-215ENST00000513588 DDX58O95786 925 aaKnown RBP13.8□□□□□ -0.2
CTNND2-215ENST00000513588 ANAPC15P60006 121 aa13.8□□□□□ -0.2
CTNND2-215ENST00000513588 CD163L1Q9NR16 1453 aa13.8□□□□□ -0.2
CTNND2-215ENST00000513588 PLEKHG3A1L390 1219 aa13.8□□□□□ -0.2
CTNND2-215ENST00000513588 SIRT1Q96EB6 747 aa13.8□□□□□ -0.2
CTNND2-215ENST00000513588 PDE4CQ08493 712 aa13.8□□□□□ -0.2
CTNND2-215ENST00000513588 NEXNQ0ZGT2 675 aa13.8□□□□□ -0.2
CTNND2-215ENST00000513588 LRSAM1Q6UWE0 723 aa13.8□□□□□ -0.2
CTNND2-215ENST00000513588 HSP90B1P14625 803 aaKnown RBP13.79□□□□□ -0.2
CTNND2-215ENST00000513588 PLEKHO1Q53GL0 409 aaPredicted RBP13.79□□□□□ -0.2
CTNND2-215ENST00000513588 RHPN1Q8TCX5 695 aa13.79□□□□□ -0.2
CTNND2-215ENST00000513588 A2ML1A8K2U0 1454 aa13.79□□□□□ -0.2
CTNND2-215ENST00000513588 PI4KAP2A4QPH2 592 aa13.79□□□□□ -0.2
CTNND2-215ENST00000513588 BTBD11A6QL63 1104 aa13.79□□□□□ -0.2
CTNND2-215ENST00000513588 ANXA1P04083 346 aa13.79□□□□□ -0.2
CTNND2-215ENST00000513588 PI4KAP1Q8N8J0 262 aa13.79□□□□□ -0.2
CTNND2-215ENST00000513588 DNAAF4Q8WXU2 420 aa13.79□□□□□ -0.2
CTNND2-215ENST00000513588 SPG7Q9UQ90 795 aa13.79□□□□□ -0.2
CTNND2-215ENST00000513588 HTATSF1O43719 755 aaKnown RBP13.79□□□□□ -0.2
CTNND2-215ENST00000513588 RRP9O43818 475 aaKnown RBP13.79□□□□□ -0.2
CTNND2-215ENST00000513588 CSB-PGBD3P0DP91 1061 aa13.79□□□□□ -0.2
CTNND2-215ENST00000513588 CASTP20810 708 aaKnown RBP13.79□□□□□ -0.2
CTNND2-215ENST00000513588 ZNF445P59923 1031 aa13.79□□□□□ -0.2
CTNND2-215ENST00000513588 XPCQ01831 940 aaPredicted RBP13.79□□□□□ -0.2
CTNND2-215ENST00000513588 RBSNQ9H1K0 784 aa13.79□□□□□ -0.2
CTNND2-215ENST00000513588 GLRX3O76003 335 aaKnown RBP13.78□□□□□ -0.2
CTNND2-215ENST00000513588 ESCO1Q5FWF5 840 aa13.78□□□□□ -0.2
CTNND2-215ENST00000513588 RNF20Q5VTR2 975 aa13.78□□□□□ -0.2
CTNND2-215ENST00000513588 JAKMIP1Q96N16 626 aaKnown RBP13.78□□□□□ -0.2
CTNND2-215ENST00000513588 CCDC9Q9Y3X0 531 aaKnown RBP13.78□□□□□ -0.2
CTNND2-215ENST00000513588 CYP46A1Q9Y6A2 500 aa13.78□□□□□ -0.2
CTNND2-215ENST00000513588 CHAMP1Q96JM3 812 aa13.78□□□□□ -0.2
CTNND2-215ENST00000513588 RBM10P98175 930 aaKnown RBP13.78□□□□□ -0.2
CTNND2-215ENST00000513588 ZRSR1Q15695 479 aaKnown RBP13.78□□□□□ -0.2
CTNND2-215ENST00000513588 RIC3Q7Z5B4 369 aa13.77□□□□□ -0.2
CTNND2-215ENST00000513588 FSD1Q9BTV5 496 aa13.77□□□□□ -0.2
CTNND2-215ENST00000513588 PHAXQ9H814 394 aaKnown RBP13.77□□□□□ -0.2
CTNND2-215ENST00000513588 AACSQ86V21 672 aa13.77□□□□□ -0.21
CTNND2-215ENST00000513588 ERC1Q8IUD2 1116 aa13.77□□□□□ -0.21
CTNND2-215ENST00000513588 DDX54Q8TDD1 881 aaKnown RBP13.77□□□□□ -0.21
CTNND2-215ENST00000513588 CPSF1Q10570 1443 aaKnown RBP13.77□□□□□ -0.21
CTNND2-215ENST00000513588 SBNO1A3KN83 1393 aa13.77□□□□□ -0.21
CTNND2-215ENST00000513588 GOLGA6L6A8MZA4 724 aa13.77□□□□□ -0.21
CTNND2-215ENST00000513588 DDIT3P35638 169 aa13.77□□□□□ -0.21
CTNND2-215ENST00000513588 SOS1Q07889 1333 aaPredicted RBP13.76□□□□□ -0.21
CTNND2-215ENST00000513588 PDRG1Q9NUG6 133 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms