RNA–Protein interactions for RNA: ENST00000513448.5

PROM1-215, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-215ENST00000513448 HSP90AB1P08238 724 aaKnown RBP11.5□□□□□ -0.57
PROM1-215ENST00000513448 ATP8B2P98198 1209 aa11.5□□□□□ -0.57
PROM1-215ENST00000513448 C14orf37Q86TY3 774 aa11.5□□□□□ -0.57
PROM1-215ENST00000513448 IL27Q8NEV9 243 aa11.5□□□□□ -0.57
PROM1-215ENST00000513448 DDX11L8A8MPP1 907 aa11.5□□□□□ -0.57
PROM1-215ENST00000513448 F6X3S4 739 aa11.5□□□□□ -0.57
PROM1-215ENST00000513448 K7ELQ4 463 aaPredicted RBP11.5□□□□□ -0.57
PROM1-215ENST00000513448 REC8O95072 547 aa11.5□□□□□ -0.57
PROM1-215ENST00000513448 PLEKHO1Q53GL0 409 aaPredicted RBP11.5□□□□□ -0.57
PROM1-215ENST00000513448 AKAP4Q5JQC9 854 aa11.5□□□□□ -0.57
PROM1-215ENST00000513448 SRCIN1Q9C0H9 1055 aa11.5□□□□□ -0.57
PROM1-215ENST00000513448 SLIT3O75094 1523 aa11.49□□□□□ -0.57
PROM1-215ENST00000513448 SDSP20132 328 aa11.49□□□□□ -0.57
PROM1-215ENST00000513448 C16orf71Q8IYS4 520 aaPredicted RBP11.49□□□□□ -0.57
PROM1-215ENST00000513448 USP26Q9BXU7 913 aa11.49□□□□□ -0.57
PROM1-215ENST00000513448 LMTK3Q96Q04 1460 aa11.49□□□□□ -0.57
PROM1-215ENST00000513448 MST1RQ04912 1400 aa11.49□□□□□ -0.57
PROM1-215ENST00000513448 HDGFL1Q5TGJ6 251 aa11.48□□□□□ -0.57
PROM1-215ENST00000513448 NBPF6Q5VWK0 638 aa11.48□□□□□ -0.57
PROM1-215ENST00000513448 LTV1Q96GA3 475 aaPredicted RBP11.48□□□□□ -0.57
PROM1-215ENST00000513448 NBPF4Q96M43 638 aa11.48□□□□□ -0.57
PROM1-215ENST00000513448 LRRCC1Q9C099 1032 aa11.48□□□□□ -0.57
PROM1-215ENST00000513448 PDE1AP54750 535 aa11.48□□□□□ -0.57
PROM1-215ENST00000513448 L1TD1Q5T7N2 865 aaKnown RBP11.48□□□□□ -0.57
PROM1-215ENST00000513448 ARHGEF25Q86VW2 580 aa11.48□□□□□ -0.57
PROM1-215ENST00000513448 LMO7Q8WWI1 1683 aa11.47□□□□□ -0.57
PROM1-215ENST00000513448 EPB41L2O43491 1005 aaKnown RBP11.47□□□□□ -0.57
PROM1-215ENST00000513448 GCP02774 474 aa11.47□□□□□ -0.57
PROM1-215ENST00000513448 EIF4A1P60842 406 aaKnown RBP11.47□□□□□ -0.57
PROM1-215ENST00000513448 AOX1Q06278 1338 aa11.47□□□□□ -0.57
PROM1-215ENST00000513448 SALL3Q9BXA9 1300 aa11.47□□□□□ -0.57
PROM1-215ENST00000513448 IBTKQ9P2D0 1353 aaPredicted RBP11.47□□□□□ -0.57
PROM1-215ENST00000513448 RAB11FIP3O75154 756 aa11.47□□□□□ -0.57
PROM1-215ENST00000513448 HSP90AA1P07900 732 aaKnown RBP11.47□□□□□ -0.57
PROM1-215ENST00000513448 GBP4Q96PP9 640 aa11.47□□□□□ -0.57
PROM1-215ENST00000513448 STAP2Q9UGK3 403 aa11.47□□□□□ -0.57
PROM1-215ENST00000513448 HDAC5Q9UQL6 1122 aa11.47□□□□□ -0.57
PROM1-215ENST00000513448 PLEKHG2Q9H7P9 1386 aa11.46□□□□□ -0.57
PROM1-215ENST00000513448 KDM3BQ7LBC6 1761 aa11.46□□□□□ -0.57
PROM1-215ENST00000513448 ERC2O15083 957 aa11.46□□□□□ -0.57
PROM1-215ENST00000513448 UBTFL1P0CB47 393 aaPredicted RBP11.46□□□□□ -0.57
PROM1-215ENST00000513448 TEFQ10587 303 aa11.46□□□□□ -0.57
PROM1-215ENST00000513448 RAB3GAP1Q15042 981 aa11.46□□□□□ -0.57
PROM1-215ENST00000513448 SPRYD3Q8NCJ5 442 aa11.46□□□□□ -0.57
PROM1-215ENST00000513448 USP44Q9H0E7 712 aa11.46□□□□□ -0.57
PROM1-215ENST00000513448 ISY1Q9ULR0 285 aaKnown RBP11.46□□□□□ -0.57
PROM1-215ENST00000513448 KIF1AQ12756 1690 aa11.45□□□□□ -0.58
PROM1-215ENST00000513448 SMARCA5O60264 1052 aaPredicted RBP11.45□□□□□ -0.58
PROM1-215ENST00000513448 CLEC17AQ6ZS10 378 aa11.45□□□□□ -0.58
PROM1-215ENST00000513448 OTUD7AQ8TE49 926 aaPredicted RBP11.45□□□□□ -0.58
PROM1-215ENST00000513448 SSH3Q8TE77 659 aa11.45□□□□□ -0.58
PROM1-215ENST00000513448 SKOR2Q2VWA4 1001 aaPredicted RBP11.45□□□□□ -0.58
PROM1-215ENST00000513448 ST18O60284 1047 aa11.44□□□□□ -0.58
PROM1-215ENST00000513448 MX1P20591 662 aa11.44□□□□□ -0.58
PROM1-215ENST00000513448 C1orf141Q5JVX7 400 aa11.44□□□□□ -0.58
PROM1-215ENST00000513448 ZNF530Q6P9A1 599 aaPredicted RBP11.44□□□□□ -0.58
PROM1-215ENST00000513448 USHBP1Q8N6Y0 703 aa11.44□□□□□ -0.58
PROM1-215ENST00000513448 C19orf44Q9H6X5 657 aa11.44□□□□□ -0.58
PROM1-215ENST00000513448 CAMTA1Q9Y6Y1 1673 aa11.44□□□□□ -0.58
PROM1-215ENST00000513448 BTBD11A6QL63 1104 aa11.43□□□□□ -0.58
PROM1-215ENST00000513448 TRAK2O60296 914 aa11.43□□□□□ -0.58
PROM1-215ENST00000513448 HSP90AB4PQ58FF6 505 aa11.43□□□□□ -0.58
PROM1-215ENST00000513448 CWC22Q9HCG8 908 aaKnown RBP11.43□□□□□ -0.58
PROM1-215ENST00000513448 DBF4Q9UBU7 674 aaPredicted RBP11.43□□□□□ -0.58
PROM1-215ENST00000513448 LRRFIP2Q9Y608 721 aaKnown RBP11.43□□□□□ -0.58
PROM1-215ENST00000513448 PNMA6EA0A0J9YXQ4 647 aa11.43□□□□□ -0.58
PROM1-215ENST00000513448 RNMTO43148 476 aaKnown RBP11.43□□□□□ -0.58
PROM1-215ENST00000513448 POLA2Q14181 598 aa11.43□□□□□ -0.58
PROM1-215ENST00000513448 DNAAF4Q8WXU2 420 aa11.43□□□□□ -0.58
PROM1-215ENST00000513448 TNPO1Q92973 898 aaKnown RBP11.43□□□□□ -0.58
PROM1-215ENST00000513448 LGR6Q9HBX8 967 aa11.43□□□□□ -0.58
PROM1-215ENST00000513448 EXOC6BQ9Y2D4 811 aa11.43□□□□□ -0.58
PROM1-215ENST00000513448 HEG1Q9ULI3 1381 aa11.43□□□□□ -0.58
PROM1-215ENST00000513448 APBB1O00213 710 aa11.42□□□□□ -0.58
PROM1-215ENST00000513448 MCM2P49736 904 aa11.42□□□□□ -0.58
PROM1-215ENST00000513448 ANAPC15P60006 121 aa11.42□□□□□ -0.58
PROM1-215ENST00000513448 NUCB2P80303 420 aa11.42□□□□□ -0.58
PROM1-215ENST00000513448 IL17RAQ96F46 866 aa11.42□□□□□ -0.58
PROM1-215ENST00000513448 ORAI2Q96SN7 254 aa11.42□□□□□ -0.58
PROM1-215ENST00000513448 TRPM3Q9HCF6 1732 aaPredicted RBP11.42□□□□□ -0.58
PROM1-215ENST00000513448 CD2BP2O95400 341 aaKnown RBP11.42□□□□□ -0.58
PROM1-215ENST00000513448 MCCP23508 829 aa11.42□□□□□ -0.58
PROM1-215ENST00000513448 BEND3Q5T5X7 828 aa11.42□□□□□ -0.58
PROM1-215ENST00000513448 KRT28Q7Z3Y7 464 aa11.42□□□□□ -0.58
PROM1-215ENST00000513448 ANKRD24Q8TF21 1146 aa11.42□□□□□ -0.58
PROM1-215ENST00000513448 NECTIN2Q92692 538 aa11.42□□□□□ -0.58
PROM1-215ENST00000513448 PHAXQ9H814 394 aaKnown RBP11.42□□□□□ -0.58
PROM1-215ENST00000513448 C1orf167Q5SNV9 1468 aa11.41□□□□□ -0.58
PROM1-215ENST00000513448 GOLGA6L22H0YM25 854 aa11.41□□□□□ -0.58
PROM1-215ENST00000513448 ALDH1L1O75891 902 aa11.41□□□□□ -0.58
PROM1-215ENST00000513448 PROSER2Q86WR7 435 aaPredicted RBP11.41□□□□□ -0.58
PROM1-215ENST00000513448 RBM42Q9BTD8 480 aaKnown RBP11.41□□□□□ -0.58
PROM1-215ENST00000513448 FSD2A1L4K1 749 aa11.4□□□□□ -0.58
PROM1-215ENST00000513448 EIF2S2P20042 333 aaKnown RBP11.4□□□□□ -0.58
PROM1-215ENST00000513448 MTX1Q13505 466 aa11.4□□□□□ -0.58
PROM1-215ENST00000513448 KIF1BPQ96EK5 621 aa11.4□□□□□ -0.58
PROM1-215ENST00000513448 RBM33Q96EV2 1170 aaKnown RBP11.4□□□□□ -0.58
PROM1-215ENST00000513448 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.4□□□□□ -0.58
PROM1-215ENST00000513448 CHPF2Q9P2E5 772 aa11.4□□□□□ -0.58
PROM1-215ENST00000513448 DCCP43146 1447 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms