RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 RGPD3A6NKT7 1758 aaPredicted RBP10.06□□□□□ -0.8
HMGXB3-204ENST00000513318 RGPD4Q7Z3J3 1758 aa10.06□□□□□ -0.8
HMGXB3-204ENST00000513318 MAPK8IP3Q9UPT6 1336 aa10.06□□□□□ -0.8
HMGXB3-204ENST00000513318 EP400Q96L91 3159 aa10.05□□□□□ -0.8
HMGXB3-204ENST00000513318 PDE3BQ13370 1112 aa10.05□□□□□ -0.8
HMGXB3-204ENST00000513318 KRT27Q7Z3Y8 459 aa10.05□□□□□ -0.8
HMGXB3-204ENST00000513318 GAS2L2Q8NHY3 880 aa10.05□□□□□ -0.8
HMGXB3-204ENST00000513318 PLEKHF1Q96S99 279 aa10.05□□□□□ -0.8
HMGXB3-204ENST00000513318 ADAMTS8Q9UP79 889 aa10.05□□□□□ -0.8
HMGXB3-204ENST00000513318 BCL9O00512 1426 aa10.05□□□□□ -0.8
HMGXB3-204ENST00000513318 PAPPAQ13219 1627 aa10.04□□□□□ -0.8
HMGXB3-204ENST00000513318 ZNF530Q6P9A1 599 aaPredicted RBP10.04□□□□□ -0.8
HMGXB3-204ENST00000513318 RUNDC1Q96C34 613 aa10.04□□□□□ -0.8
HMGXB3-204ENST00000513318 MRC1P22897 1456 aa10.04□□□□□ -0.8
HMGXB3-204ENST00000513318 MAP3K5Q99683 1374 aa10.03□□□□□ -0.8
HMGXB3-204ENST00000513318 HAX1O00165 279 aa10.03□□□□□ -0.8
HMGXB3-204ENST00000513318 CYP27B1O15528 508 aa10.03□□□□□ -0.8
HMGXB3-204ENST00000513318 LY75O60449 1722 aa10.03□□□□□ -0.8
HMGXB3-204ENST00000513318 CD44P16070 742 aaKnown RBP10.03□□□□□ -0.8
HMGXB3-204ENST00000513318 C1orf141Q5JVX7 400 aa10.03□□□□□ -0.8
HMGXB3-204ENST00000513318 IFNL2Q8IZJ0 200 aa10.03□□□□□ -0.8
HMGXB3-204ENST00000513318 FAM9BQ8IZU0 186 aa10.03□□□□□ -0.8
HMGXB3-204ENST00000513318 KDM3BQ7LBC6 1761 aa10.03□□□□□ -0.8
HMGXB3-204ENST00000513318 UBR2Q8IWV8 1755 aa10.03□□□□□ -0.8
HMGXB3-204ENST00000513318 HSP90AB1P08238 724 aaKnown RBP10.02□□□□□ -0.81
HMGXB3-204ENST00000513318 PHKG2P15735 406 aa10.02□□□□□ -0.81
HMGXB3-204ENST00000513318 EVX2Q03828 476 aa10.02□□□□□ -0.81
HMGXB3-204ENST00000513318 MTHFSDQ2M296 383 aaKnown RBP10.02□□□□□ -0.81
HMGXB3-204ENST00000513318 AKAP4Q5JQC9 854 aa10.02□□□□□ -0.81
HMGXB3-204ENST00000513318 CCDC146Q8IYE0 955 aa10.02□□□□□ -0.81
HMGXB3-204ENST00000513318 MARCH10Q8NA82 808 aaPredicted RBP10.02□□□□□ -0.81
HMGXB3-204ENST00000513318 DDX54Q8TDD1 881 aaKnown RBP10.02□□□□□ -0.81
HMGXB3-204ENST00000513318 PHACTR3Q96KR7 559 aa10.02□□□□□ -0.81
HMGXB3-204ENST00000513318 TSPYL2Q9H2G4 693 aaPredicted RBP10.02□□□□□ -0.81
HMGXB3-204ENST00000513318 TAF1LQ8IZX4 1826 aa10.02□□□□□ -0.81
HMGXB3-204ENST00000513318 KDM6AO15550 1401 aaPredicted RBP10.01□□□□□ -0.81
HMGXB3-204ENST00000513318 NKX1-1Q15270 411 aaPredicted RBP10.01□□□□□ -0.81
HMGXB3-204ENST00000513318 NFE2L2Q16236 605 aa10.01□□□□□ -0.81
HMGXB3-204ENST00000513318 DCAF8Q5TAQ9 597 aa10.01□□□□□ -0.81
HMGXB3-204ENST00000513318 GNAT3A8MTJ3 354 aa10□□□□□ -0.81
HMGXB3-204ENST00000513318 TMPOP42166 694 aaKnown RBP10□□□□□ -0.81
HMGXB3-204ENST00000513318 FAM196AQ6ZSG2 479 aa10□□□□□ -0.81
HMGXB3-204ENST00000513318 FAM212AQ96EL1 285 aa10□□□□□ -0.81
HMGXB3-204ENST00000513318 DCAF5Q96JK2 942 aa10□□□□□ -0.81
HMGXB3-204ENST00000513318 ZNF831Q5JPB2 1677 aa9.99□□□□□ -0.81
HMGXB3-204ENST00000513318 LMOD3Q0VAK6 560 aa9.99□□□□□ -0.81
HMGXB3-204ENST00000513318 FAM182BQ5T319 152 aa9.99□□□□□ -0.81
HMGXB3-204ENST00000513318 CIZ1Q9ULV3 898 aaPredicted RBP9.99□□□□□ -0.81
HMGXB3-204ENST00000513318 CICQ96RK0 1608 aaPredicted RBP9.99□□□□□ -0.81
HMGXB3-204ENST00000513318 RREB1Q92766 1687 aa9.99□□□□□ -0.81
HMGXB3-204ENST00000513318 CEMIPQ8WUJ3 1361 aa9.99□□□□□ -0.81
HMGXB3-204ENST00000513318 LAMB4A4D0S4 1761 aa9.98□□□□□ -0.81
HMGXB3-204ENST00000513318 CACNA1FO60840 1977 aa9.98□□□□□ -0.81
HMGXB3-204ENST00000513318 APAF1O14727 1248 aa9.98□□□□□ -0.81
HMGXB3-204ENST00000513318 HTATSF1O43719 755 aaKnown RBP9.98□□□□□ -0.81
HMGXB3-204ENST00000513318 RTF1Q92541 710 aaKnown RBP9.98□□□□□ -0.81
HMGXB3-204ENST00000513318 RTN4Q9NQC3 1192 aaKnown RBP9.98□□□□□ -0.81
HMGXB3-204ENST00000513318 COL5A3P25940 1745 aaPredicted RBP9.98□□□□□ -0.81
HMGXB3-204ENST00000513318 C5P01031 1676 aa9.97□□□□□ -0.81
HMGXB3-204ENST00000513318 RNMTO43148 476 aaKnown RBP9.97□□□□□ -0.81
HMGXB3-204ENST00000513318 RIPK4P57078 832 aa9.97□□□□□ -0.81
HMGXB3-204ENST00000513318 GSE1Q14687 1217 aa9.97□□□□□ -0.81
HMGXB3-204ENST00000513318 MPRIPQ6WCQ1 1025 aa9.97□□□□□ -0.81
HMGXB3-204ENST00000513318 NGEFQ8N5V2 710 aa9.97□□□□□ -0.81
HMGXB3-204ENST00000513318 ERVV-2B6SEH9 535 aa9.96□□□□□ -0.82
HMGXB3-204ENST00000513318 ILDR2Q71H61 639 aa9.96□□□□□ -0.82
HMGXB3-204ENST00000513318 ACSBG1Q96GR2 724 aa9.96□□□□□ -0.82
HMGXB3-204ENST00000513318 RRP7AQ9Y3A4 280 aaKnown RBP9.96□□□□□ -0.82
HMGXB3-204ENST00000513318 TJP1Q07157 1748 aa9.96□□□□□ -0.82
HMGXB3-204ENST00000513318 NUP188Q5SRE5 1749 aa9.96□□□□□ -0.82
HMGXB3-204ENST00000513318 TEFQ10587 303 aa9.95□□□□□ -0.82
HMGXB3-204ENST00000513318 NEUROD2Q15784 382 aa9.95□□□□□ -0.82
HMGXB3-204ENST00000513318 CCDC27Q2M243 656 aa9.95□□□□□ -0.82
HMGXB3-204ENST00000513318 IL17REQ8NFR9 667 aa9.95□□□□□ -0.82
HMGXB3-204ENST00000513318 SYTL4Q96C24 671 aaPredicted RBP9.95□□□□□ -0.82
HMGXB3-204ENST00000513318 LGR6Q9HBX8 967 aa9.95□□□□□ -0.82
HMGXB3-204ENST00000513318 TMOD3Q9NYL9 352 aa9.95□□□□□ -0.82
HMGXB3-204ENST00000513318 TRIM37O94972 964 aa9.94□□□□□ -0.82
HMGXB3-204ENST00000513318 CABP4P57796 275 aa9.94□□□□□ -0.82
HMGXB3-204ENST00000513318 DCTN1Q14203 1278 aa9.94□□□□□ -0.82
HMGXB3-204ENST00000513318 MCM10Q7L590 875 aa9.94□□□□□ -0.82
HMGXB3-204ENST00000513318 BCL11BQ9C0K0 894 aaPredicted RBP9.94□□□□□ -0.82
HMGXB3-204ENST00000513318 SLC52A2Q9HAB3 445 aa9.94□□□□□ -0.82
HMGXB3-204ENST00000513318 TRIM35Q9UPQ4 493 aa9.94□□□□□ -0.82
HMGXB3-204ENST00000513318 TUBGCP6Q96RT7 1819 aa9.93□□□□□ -0.82
HMGXB3-204ENST00000513318 QSER1Q2KHR3 1735 aa9.93□□□□□ -0.82
HMGXB3-204ENST00000513318 KCNQ2O43526 872 aa9.93□□□□□ -0.82
HMGXB3-204ENST00000513318 PRIM1P49642 420 aaKnown RBP9.93□□□□□ -0.82
HMGXB3-204ENST00000513318 CALD1Q05682 793 aaKnown RBP9.93□□□□□ -0.82
HMGXB3-204ENST00000513318 MYH14Q7Z406 1995 aaKnown RBP9.93□□□□□ -0.82
HMGXB3-204ENST00000513318 KCPQ6ZWJ8 1503 aa9.92□□□□□ -0.82
HMGXB3-204ENST00000513318 UBR3Q6ZT12 1888 aa9.92□□□□□ -0.82
HMGXB3-204ENST00000513318 SF3B2Q13435 895 aaKnown RBP9.92□□□□□ -0.82
HMGXB3-204ENST00000513318 CCDC125Q86Z20 511 aa9.92□□□□□ -0.82
HMGXB3-204ENST00000513318 NFATC2IPQ8NCF5 419 aa9.92□□□□□ -0.82
HMGXB3-204ENST00000513318 PIGBQ92521 554 aa9.92□□□□□ -0.82
HMGXB3-204ENST00000513318 PHF12Q96QT6 1004 aa9.92□□□□□ -0.82
HMGXB3-204ENST00000513318 THUMPD2Q9BTF0 503 aaKnown RBP9.92□□□□□ -0.82
HMGXB3-204ENST00000513318 TAF7Q15545 349 aaPredicted RBP9.91□□□□□ -0.82
HMGXB3-204ENST00000513318 WWC1Q8IX03 1113 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms