RNA–Protein interactions for RNA: ENST00000513159.5

PTPN20-227, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-227ENST00000513159 HTATSF1O43719 755 aaKnown RBP13.67□□□□□ -0.22
PTPN20-227ENST00000513159 NEUROD2Q15784 382 aa13.67□□□□□ -0.22
PTPN20-227ENST00000513159 PROM2Q8N271 834 aa13.67□□□□□ -0.22
PTPN20-227ENST00000513159 SYTL4Q96C24 671 aaPredicted RBP13.67□□□□□ -0.22
PTPN20-227ENST00000513159 SLC52A2Q9HAB3 445 aa13.67□□□□□ -0.22
PTPN20-227ENST00000513159 CAMKK2Q96RR4 588 aa13.66□□□□□ -0.22
PTPN20-227ENST00000513159 ATG3Q9NT62 314 aa13.66□□□□□ -0.22
PTPN20-227ENST00000513159 ASAP1Q9ULH1 1129 aa13.66□□□□□ -0.22
PTPN20-227ENST00000513159 NUP188Q5SRE5 1749 aa13.66□□□□□ -0.22
PTPN20-227ENST00000513159 PLSCR1O15162 318 aa13.65□□□□□ -0.22
PTPN20-227ENST00000513159 APBA3O96018 575 aa13.65□□□□□ -0.22
PTPN20-227ENST00000513159 CABP4P57796 275 aa13.65□□□□□ -0.22
PTPN20-227ENST00000513159 EN1Q05925 392 aaPredicted RBP13.65□□□□□ -0.22
PTPN20-227ENST00000513159 CCDC125Q86Z20 511 aa13.65□□□□□ -0.22
PTPN20-227ENST00000513159 TMOD3Q9NYL9 352 aa13.65□□□□□ -0.22
PTPN20-227ENST00000513159 KCPQ6ZWJ8 1503 aa13.64□□□□□ -0.23
PTPN20-227ENST00000513159 MYH14Q7Z406 1995 aaKnown RBP13.64□□□□□ -0.23
PTPN20-227ENST00000513159 KCNQ3O43525 872 aa13.64□□□□□ -0.23
PTPN20-227ENST00000513159 NEFMP07197 916 aa13.64□□□□□ -0.23
PTPN20-227ENST00000513159 EZH2Q15910 746 aaKnown RBP13.64□□□□□ -0.23
PTPN20-227ENST00000513159 SLC4A9Q96Q91 983 aa13.64□□□□□ -0.23
PTPN20-227ENST00000513159 SLC39A6Q13433 755 aa13.63□□□□□ -0.23
PTPN20-227ENST00000513159 LRRC4BQ9NT99 713 aa13.63□□□□□ -0.23
PTPN20-227ENST00000513159 TJP1Q07157 1748 aa13.63□□□□□ -0.23
PTPN20-227ENST00000513159 ZNF831Q5JPB2 1677 aa13.63□□□□□ -0.23
PTPN20-227ENST00000513159 COL5A3P25940 1745 aaPredicted RBP13.62□□□□□ -0.23
PTPN20-227ENST00000513159 PALLDQ8WX93 1383 aa13.62□□□□□ -0.23
PTPN20-227ENST00000513159 CICQ96RK0 1608 aaPredicted RBP13.62□□□□□ -0.23
PTPN20-227ENST00000513159 KCNQ4P56696 695 aa13.62□□□□□ -0.23
PTPN20-227ENST00000513159 RTF1Q92541 710 aaKnown RBP13.62□□□□□ -0.23
PTPN20-227ENST00000513159 MIS18AQ9NYP9 233 aa13.62□□□□□ -0.23
PTPN20-227ENST00000513159 C5P01031 1676 aa13.61□□□□□ -0.23
PTPN20-227ENST00000513159 CCDC27Q2M243 656 aa13.61□□□□□ -0.23
PTPN20-227ENST00000513159 NCBP3Q53F19 620 aaKnown RBP13.61□□□□□ -0.23
PTPN20-227ENST00000513159 WWC1Q8IX03 1113 aa13.61□□□□□ -0.23
PTPN20-227ENST00000513159 SALL2Q9Y467 1007 aaPredicted RBP13.61□□□□□ -0.23
PTPN20-227ENST00000513159 TUBGCP6Q96RT7 1819 aa13.61□□□□□ -0.23
PTPN20-227ENST00000513159 ZNF521Q96K83 1311 aa13.61□□□□□ -0.23
PTPN20-227ENST00000513159 BAG6P46379 1132 aa13.6□□□□□ -0.23
PTPN20-227ENST00000513159 TEFQ10587 303 aa13.6□□□□□ -0.23
PTPN20-227ENST00000513159 TAF7Q15545 349 aaPredicted RBP13.6□□□□□ -0.23
PTPN20-227ENST00000513159 TXNRD1Q16881 649 aa13.6□□□□□ -0.23
PTPN20-227ENST00000513159 ZNF853P0CG23 659 aa13.59□□□□□ -0.23
PTPN20-227ENST00000513159 SPINK5Q9NQ38 1064 aaPredicted RBP13.59□□□□□ -0.23
PTPN20-227ENST00000513159 BTBD11A6QL63 1104 aa13.58□□□□□ -0.24
PTPN20-227ENST00000513159 CHL1O00533 1208 aa13.58□□□□□ -0.24
PTPN20-227ENST00000513159 LMOD3Q0VAK6 560 aa13.58□□□□□ -0.24
PTPN20-227ENST00000513159 SF3B2Q13435 895 aaKnown RBP13.58□□□□□ -0.24
PTPN20-227ENST00000513159 ITPK1Q13572 414 aa13.58□□□□□ -0.24
PTPN20-227ENST00000513159 ZNF790Q6PG37 636 aa13.58□□□□□ -0.24
PTPN20-227ENST00000513159 SMARCC1Q92922 1105 aaPredicted RBP13.58□□□□□ -0.24
PTPN20-227ENST00000513159 ZNF496Q96IT1 587 aaPredicted RBP13.58□□□□□ -0.24
PTPN20-227ENST00000513159 HEG1Q9ULI3 1381 aa13.58□□□□□ -0.24
PTPN20-227ENST00000513159 UBR3Q6ZT12 1888 aa13.57□□□□□ -0.24
PTPN20-227ENST00000513159 LOC102724428A0A0B4J2F2 783 aa13.57□□□□□ -0.24
PTPN20-227ENST00000513159 PTCD1O75127 700 aaKnown RBP13.57□□□□□ -0.24
PTPN20-227ENST00000513159 SIK1P57059 783 aa13.57□□□□□ -0.24
PTPN20-227ENST00000513159 C4BP0C0L5 1744 aa13.56□□□□□ -0.24
PTPN20-227ENST00000513159 ANO8Q9HCE9 1232 aaPredicted RBP13.56□□□□□ -0.24
PTPN20-227ENST00000513159 PRAMEF22A3QJZ6 481 aa13.55□□□□□ -0.24
PTPN20-227ENST00000513159 EIF4A1P60842 406 aaKnown RBP13.55□□□□□ -0.24
PTPN20-227ENST00000513159 KRT24Q2M2I5 525 aa13.55□□□□□ -0.24
PTPN20-227ENST00000513159 LINC00116Q8NCU8 138 aa13.55□□□□□ -0.24
PTPN20-227ENST00000513159 CFAP44Q96MT7 982 aa13.55□□□□□ -0.24
PTPN20-227ENST00000513159 RBM42Q9BTD8 480 aaKnown RBP13.55□□□□□ -0.24
PTPN20-227ENST00000513159 MBIPQ9NS73 344 aa13.55□□□□□ -0.24
PTPN20-227ENST00000513159 CCNL1Q9UK58 526 aaPredicted RBP13.55□□□□□ -0.24
PTPN20-227ENST00000513159 LAMB4A4D0S4 1761 aa13.55□□□□□ -0.24
PTPN20-227ENST00000513159 SLC27A3Q5K4L6 730 aa13.54□□□□□ -0.24
PTPN20-227ENST00000513159 AMIGO3Q86WK7 504 aa13.54□□□□□ -0.24
PTPN20-227ENST00000513159 DNAJC10Q8IXB1 793 aa13.54□□□□□ -0.24
PTPN20-227ENST00000513159 QSER1Q2KHR3 1735 aa13.53□□□□□ -0.24
PTPN20-227ENST00000513159 ATP6V1AP38606 617 aa13.53□□□□□ -0.24
PTPN20-227ENST00000513159 ZNF827Q17R98 1081 aa13.53□□□□□ -0.24
PTPN20-227ENST00000513159 WDR63Q8IWG1 891 aa13.53□□□□□ -0.24
PTPN20-227ENST00000513159 NGEFQ8N5V2 710 aa13.53□□□□□ -0.24
PTPN20-227ENST00000513159 AKT1S1Q96B36 256 aa13.53□□□□□ -0.24
PTPN20-227ENST00000513159 IFT57Q9NWB7 429 aa13.53□□□□□ -0.24
PTPN20-227ENST00000513159 BABAM1Q9NWV8 329 aa13.53□□□□□ -0.24
PTPN20-227ENST00000513159 TSPYL4Q9UJ04 414 aa13.53□□□□□ -0.24
PTPN20-227ENST00000513159 IL16Q14005 1332 aa13.53□□□□□ -0.24
PTPN20-227ENST00000513159 TSR2Q969E8 191 aaKnown RBP13.52□□□□□ -0.25
PTPN20-227ENST00000513159 CDCA7LQ96GN5 454 aa13.52□□□□□ -0.25
PTPN20-227ENST00000513159 LAS1LQ9Y4W2 734 aaKnown RBP13.52□□□□□ -0.25
PTPN20-227ENST00000513159 USP16Q9Y5T5 823 aa13.52□□□□□ -0.25
PTPN20-227ENST00000513159 GIGYF1O75420 1035 aaPredicted RBP13.51□□□□□ -0.25
PTPN20-227ENST00000513159 SMIM5Q71RC9 77 aa13.51□□□□□ -0.25
PTPN20-227ENST00000513159 TTC5Q8N0Z6 440 aa13.51□□□□□ -0.25
PTPN20-227ENST00000513159 VSIG10Q8N0Z9 540 aa13.51□□□□□ -0.25
PTPN20-227ENST00000513159 FMNL2Q96PY5 1086 aa13.51□□□□□ -0.25
PTPN20-227ENST00000513159 CYP19A1P11511 503 aaPredicted RBP13.5□□□□□ -0.25
PTPN20-227ENST00000513159 GNAI1P63096 354 aa13.5□□□□□ -0.25
PTPN20-227ENST00000513159 HNRNPUQ00839 825 aaKnown RBP eCLIP13.5□□□□□ -0.25
PTPN20-227ENST00000513159 INTS5Q6P9B9 1019 aaKnown RBP13.5□□□□□ -0.25
PTPN20-227ENST00000513159 CASZ1Q86V15 1759 aa13.5□□□□□ -0.25
PTPN20-227ENST00000513159 C4AP0C0L4 1744 aa13.5□□□□□ -0.25
PTPN20-227ENST00000513159 FANCIQ9NVI1 1328 aa13.49□□□□□ -0.25
PTPN20-227ENST00000513159 TRMT2AQ8IZ69 625 aaKnown RBP13.49□□□□□ -0.25
PTPN20-227ENST00000513159 TSPYL6Q8N831 410 aa13.49□□□□□ -0.25
PTPN20-227ENST00000513159 C8orf58Q8NAV2 365 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms