RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 DCTN1Q14203 1278 aa21.7■■□□□ 1.06
HMGCL-209ENST00000513148 IL17REQ8NFR9 667 aa21.69■■□□□ 1.06
HMGCL-209ENST00000513148 TMPOP42166 694 aaKnown RBP21.68■■□□□ 1.06
HMGCL-209ENST00000513148 RIPK4P57078 832 aa21.68■■□□□ 1.06
HMGCL-209ENST00000513148 NFATC2IPQ8NCF5 419 aa21.68■■□□□ 1.06
HMGCL-209ENST00000513148 MRC1P22897 1456 aa21.67■■□□□ 1.06
HMGCL-209ENST00000513148 APAF1O14727 1248 aa21.67■■□□□ 1.06
HMGCL-209ENST00000513148 EZH2Q15910 746 aaKnown RBP21.67■■□□□ 1.06
HMGCL-209ENST00000513148 SLC52A2Q9HAB3 445 aa21.67■■□□□ 1.06
HMGCL-209ENST00000513148 RGPD3A6NKT7 1758 aaPredicted RBP21.66■■□□□ 1.06
HMGCL-209ENST00000513148 RGPD4Q7Z3J3 1758 aa21.66■■□□□ 1.06
HMGCL-209ENST00000513148 TEFQ10587 303 aa21.65■■□□□ 1.06
HMGCL-209ENST00000513148 THUMPD2Q9BTF0 503 aaKnown RBP21.65■■□□□ 1.06
HMGCL-209ENST00000513148 CEMIPQ8WUJ3 1361 aa21.65■■□□□ 1.06
HMGCL-209ENST00000513148 ASAP1Q9ULH1 1129 aa21.65■■□□□ 1.06
HMGCL-209ENST00000513148 SIPA1L3O60292 1781 aaPredicted RBP21.65■■□□□ 1.06
HMGCL-209ENST00000513148 CAMKK2Q96RR4 588 aa21.64■■□□□ 1.05
HMGCL-209ENST00000513148 PLSCR1O15162 318 aa21.63■■□□□ 1.05
HMGCL-209ENST00000513148 HTATSF1O43719 755 aaKnown RBP21.63■■□□□ 1.05
HMGCL-209ENST00000513148 PALLDQ8WX93 1383 aa21.63■■□□□ 1.05
HMGCL-209ENST00000513148 LY75O60449 1722 aa21.63■■□□□ 1.05
HMGCL-209ENST00000513148 RREB1Q92766 1687 aa21.62■■□□□ 1.05
HMGCL-209ENST00000513148 ATG3Q9NT62 314 aa21.62■■□□□ 1.05
HMGCL-209ENST00000513148 KCNQ4P56696 695 aa21.61■■□□□ 1.05
HMGCL-209ENST00000513148 LMOD3Q0VAK6 560 aa21.61■■□□□ 1.05
HMGCL-209ENST00000513148 SLC39A6Q13433 755 aa21.6■■□□□ 1.05
HMGCL-209ENST00000513148 TXNRD1Q16881 649 aa21.6■■□□□ 1.05
HMGCL-209ENST00000513148 PAPPAQ13219 1627 aa21.6■■□□□ 1.05
HMGCL-209ENST00000513148 NUP188Q5SRE5 1749 aa21.6■■□□□ 1.05
HMGCL-209ENST00000513148 PROM2Q8N271 834 aa21.6■■□□□ 1.05
HMGCL-209ENST00000513148 TRIM35Q9UPQ4 493 aa21.6■■□□□ 1.05
HMGCL-209ENST00000513148 SALL2Q9Y467 1007 aaPredicted RBP21.6■■□□□ 1.05
HMGCL-209ENST00000513148 SMARCC1Q92922 1105 aaPredicted RBP21.59■■□□□ 1.05
HMGCL-209ENST00000513148 PTCD1O75127 700 aaKnown RBP21.57■■□□□ 1.04
HMGCL-209ENST00000513148 RBM42Q9BTD8 480 aaKnown RBP21.57■■□□□ 1.04
HMGCL-209ENST00000513148 CCNL1Q9UK58 526 aaPredicted RBP21.57■■□□□ 1.04
HMGCL-209ENST00000513148 BTBD11A6QL63 1104 aa21.56■■□□□ 1.04
HMGCL-209ENST00000513148 LRRC4BQ9NT99 713 aa21.56■■□□□ 1.04
HMGCL-209ENST00000513148 MIS18AQ9NYP9 233 aa21.56■■□□□ 1.04
HMGCL-209ENST00000513148 TTC5Q8N0Z6 440 aa21.55■■□□□ 1.04
HMGCL-209ENST00000513148 LOC102724428A0A0B4J2F2 783 aa21.55■■□□□ 1.04
HMGCL-209ENST00000513148 SIK1P57059 783 aa21.55■■□□□ 1.04
HMGCL-209ENST00000513148 UBR2Q8IWV8 1755 aa21.54■■□□□ 1.04
HMGCL-209ENST00000513148 TAF7Q15545 349 aaPredicted RBP21.54■■□□□ 1.04
HMGCL-209ENST00000513148 C5P01031 1676 aa21.53■■□□□ 1.04
HMGCL-209ENST00000513148 KCPQ6ZWJ8 1503 aa21.53■■□□□ 1.04
HMGCL-209ENST00000513148 KCNQ3O43525 872 aa21.53■■□□□ 1.04
HMGCL-209ENST00000513148 SLC27A3Q5K4L6 730 aa21.53■■□□□ 1.04
HMGCL-209ENST00000513148 ZNF790Q6PG37 636 aa21.53■■□□□ 1.04
HMGCL-209ENST00000513148 LAS1LQ9Y4W2 734 aaKnown RBP21.53■■□□□ 1.04
HMGCL-209ENST00000513148 TAF1LQ8IZX4 1826 aa21.52■■□□□ 1.04
HMGCL-209ENST00000513148 ATP6V1AP38606 617 aa21.52■■□□□ 1.04
HMGCL-209ENST00000513148 KDM3BQ7LBC6 1761 aa21.52■■□□□ 1.04
HMGCL-209ENST00000513148 SLC4A9Q96Q91 983 aa21.51■■□□□ 1.03
HMGCL-209ENST00000513148 RBM19Q9Y4C8 960 aaKnown RBP21.5■■□□□ 1.03
HMGCL-209ENST00000513148 TJP1Q07157 1748 aa21.49■■□□□ 1.03
HMGCL-209ENST00000513148 ITPK1Q13572 414 aa21.49■■□□□ 1.03
HMGCL-209ENST00000513148 WWC1Q8IX03 1113 aa21.49■■□□□ 1.03
HMGCL-209ENST00000513148 ZNF496Q96IT1 587 aaPredicted RBP21.49■■□□□ 1.03
HMGCL-209ENST00000513148 ANO8Q9HCE9 1232 aaPredicted RBP21.49■■□□□ 1.03
HMGCL-209ENST00000513148 TSPYL4Q9UJ04 414 aa21.49■■□□□ 1.03
HMGCL-209ENST00000513148 CCDC27Q2M243 656 aa21.48■■□□□ 1.03
HMGCL-209ENST00000513148 ZNF831Q5JPB2 1677 aa21.48■■□□□ 1.03
HMGCL-209ENST00000513148 C4BP0C0L5 1744 aa21.47■■□□□ 1.03
HMGCL-209ENST00000513148 COL5A3P25940 1745 aaPredicted RBP21.47■■□□□ 1.03
HMGCL-209ENST00000513148 LINC00116Q8NCU8 138 aa21.46■■□□□ 1.03
HMGCL-209ENST00000513148 FMNL2Q96PY5 1086 aa21.46■■□□□ 1.03
HMGCL-209ENST00000513148 NBPF14Q5TI25 921 aa21.46■■□□□ 1.03
HMGCL-209ENST00000513148 CALD1Q05682 793 aaKnown RBP21.45■■□□□ 1.02
HMGCL-209ENST00000513148 ZNF827Q17R98 1081 aa21.45■■□□□ 1.02
HMGCL-209ENST00000513148 DNAJC10Q8IXB1 793 aa21.45■■□□□ 1.02
HMGCL-209ENST00000513148 HEG1Q9ULI3 1381 aa21.44■■□□□ 1.02
HMGCL-209ENST00000513148 CICQ96RK0 1608 aaPredicted RBP21.44■■□□□ 1.02
HMGCL-209ENST00000513148 STK32BQ9NY57 414 aa21.44■■□□□ 1.02
HMGCL-209ENST00000513148 PSDA5PKW4 1024 aaPredicted RBP21.43■■□□□ 1.02
HMGCL-209ENST00000513148 R3HDM1Q15032 1099 aaKnown RBP21.43■■□□□ 1.02
HMGCL-209ENST00000513148 CFAP44Q96MT7 982 aa21.43■■□□□ 1.02
HMGCL-209ENST00000513148 TUBGCP6Q96RT7 1819 aa21.43■■□□□ 1.02
HMGCL-209ENST00000513148 PRAMEF22A3QJZ6 481 aa21.42■■□□□ 1.02
HMGCL-209ENST00000513148 CHL1O00533 1208 aa21.42■■□□□ 1.02
HMGCL-209ENST00000513148 NCBP3Q53F19 620 aaKnown RBP21.42■■□□□ 1.02
HMGCL-209ENST00000513148 MBIPQ9NS73 344 aa21.42■■□□□ 1.02
HMGCL-209ENST00000513148 IFT57Q9NWB7 429 aa21.42■■□□□ 1.02
HMGCL-209ENST00000513148 EIF4A1P60842 406 aaKnown RBP21.41■■□□□ 1.02
HMGCL-209ENST00000513148 GNAI1P63096 354 aa21.41■■□□□ 1.02
HMGCL-209ENST00000513148 SLC15A2Q16348 729 aa21.41■■□□□ 1.02
HMGCL-209ENST00000513148 VSIG10Q8N0Z9 540 aa21.41■■□□□ 1.02
HMGCL-209ENST00000513148 AK7Q96M32 723 aa21.41■■□□□ 1.02
HMGCL-209ENST00000513148 FANCIQ9NVI1 1328 aa21.41■■□□□ 1.02
HMGCL-209ENST00000513148 AKT1S1Q96B36 256 aa21.41■■□□□ 1.02
HMGCL-209ENST00000513148 BABAM1Q9NWV8 329 aa21.41■■□□□ 1.02
HMGCL-209ENST00000513148 NGEFQ8N5V2 710 aa21.4■■□□□ 1.02
HMGCL-209ENST00000513148 TFCP2L1Q9NZI6 479 aa21.4■■□□□ 1.02
HMGCL-209ENST00000513148 ZNF853P0CG23 659 aa21.39■■□□□ 1.02
HMGCL-209ENST00000513148 HNRNPUQ00839 825 aaKnown RBP eCLIP21.39■■□□□ 1.02
HMGCL-209ENST00000513148 TSR2Q969E8 191 aaKnown RBP21.39■■□□□ 1.02
HMGCL-209ENST00000513148 MYH14Q7Z406 1995 aaKnown RBP21.39■■□□□ 1.02
HMGCL-209ENST00000513148 CRKLP46109 303 aaKnown RBP21.39■■□□□ 1.01
HMGCL-209ENST00000513148 KRT24Q2M2I5 525 aa21.39■■□□□ 1.01
HMGCL-209ENST00000513148 LAMB4A4D0S4 1761 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms