RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 CBLBQ13191 982 aa7.3□□□□□ -1.24
HTT-210ENST00000512909 SCARF1Q14162 830 aa7.3□□□□□ -1.24
HTT-210ENST00000512909 TSEN34Q9BSV6 310 aaKnown RBP7.3□□□□□ -1.24
HTT-210ENST00000512909 ZFAND3Q9H8U3 227 aa7.3□□□□□ -1.24
HTT-210ENST00000512909 TOR4AQ9NXH8 423 aa7.3□□□□□ -1.24
HTT-210ENST00000512909 PPP1R12BO60237 982 aaPredicted RBP7.29□□□□□ -1.24
HTT-210ENST00000512909 LGR5O75473 907 aa7.29□□□□□ -1.24
HTT-210ENST00000512909 SMPD1P17405 629 aa7.29□□□□□ -1.24
HTT-210ENST00000512909 ADD1P35611 737 aaKnown RBP7.29□□□□□ -1.24
HTT-210ENST00000512909 TMEM214Q6NUQ4 689 aaKnown RBP7.29□□□□□ -1.24
HTT-210ENST00000512909 SCG3Q8WXD2 468 aaKnown RBP7.29□□□□□ -1.24
HTT-210ENST00000512909 CNKSR1Q969H4 720 aa7.29□□□□□ -1.24
HTT-210ENST00000512909 AGBL1Q96MI9 1066 aa7.29□□□□□ -1.24
HTT-210ENST00000512909 GZF1Q9H116 711 aaPredicted RBP7.29□□□□□ -1.24
HTT-210ENST00000512909 ETNK1Q9HBU6 452 aa7.29□□□□□ -1.24
HTT-210ENST00000512909 POLMQ9NP87 494 aaPredicted RBP7.29□□□□□ -1.24
HTT-210ENST00000512909 CCDC9Q9Y3X0 531 aaKnown RBP7.29□□□□□ -1.24
HTT-210ENST00000512909 A0A1W2PRU2 124 aa7.28□□□□□ -1.24
HTT-210ENST00000512909 BMP2P12643 396 aa7.28□□□□□ -1.24
HTT-210ENST00000512909 TIMP2P16035 220 aa7.28□□□□□ -1.24
HTT-210ENST00000512909 SMTNP53814 917 aa7.28□□□□□ -1.24
HTT-210ENST00000512909 GNASQ5JWF2 1037 aa7.28□□□□□ -1.24
HTT-210ENST00000512909 TMCO4Q5TGY1 634 aa7.28□□□□□ -1.24
HTT-210ENST00000512909 TNS4Q8IZW8 715 aa7.28□□□□□ -1.24
HTT-210ENST00000512909 GAS2L2Q8NHY3 880 aa7.28□□□□□ -1.24
HTT-210ENST00000512909 HPS1Q92902 700 aa7.28□□□□□ -1.24
HTT-210ENST00000512909 ESYT1Q9BSJ8 1104 aa7.28□□□□□ -1.24
HTT-210ENST00000512909 ZNF395Q9H8N7 513 aaPredicted RBP7.28□□□□□ -1.24
HTT-210ENST00000512909 ZNF232Q9UNY5 417 aa7.28□□□□□ -1.24
HTT-210ENST00000512909 IVNS1ABPQ9Y6Y0 642 aa7.28□□□□□ -1.24
HTT-210ENST00000512909 A6NJY4 79 aa7.27□□□□□ -1.25
HTT-210ENST00000512909 TMEM229AB2RXF0 380 aa7.27□□□□□ -1.25
HTT-210ENST00000512909 WASLO00401 505 aaPredicted RBP7.27□□□□□ -1.25
HTT-210ENST00000512909 GFRA3O60609 400 aa7.27□□□□□ -1.25
HTT-210ENST00000512909 PTCD1O75127 700 aaKnown RBP7.27□□□□□ -1.25
HTT-210ENST00000512909 ABL1P00519 1130 aa7.27□□□□□ -1.25
HTT-210ENST00000512909 Q6ZVU0 165 aa7.27□□□□□ -1.25
HTT-210ENST00000512909 ZSCAN10Q96SZ4 725 aaPredicted RBP7.27□□□□□ -1.25
HTT-210ENST00000512909 CABP1Q9NZU7 370 aa7.27□□□□□ -1.25
HTT-210ENST00000512909 ATAD2Q6PL18 1390 aa7.26□□□□□ -1.25
HTT-210ENST00000512909 IGFBP4P22692 258 aa7.26□□□□□ -1.25
HTT-210ENST00000512909 SSFA2P28290 1259 aa7.26□□□□□ -1.25
HTT-210ENST00000512909 SCNN1DP51172 638 aa7.26□□□□□ -1.25
HTT-210ENST00000512909 CLN3Q13286 438 aa7.26□□□□□ -1.25
HTT-210ENST00000512909 C6orf118Q5T5N4 469 aa7.26□□□□□ -1.25
HTT-210ENST00000512909 XAGE2Q96GT9 111 aa7.26□□□□□ -1.25
HTT-210ENST00000512909 MKNK1Q9BUB5 465 aa7.26□□□□□ -1.25
HTT-210ENST00000512909 CXXC1Q9P0U4 656 aaPredicted RBP7.26□□□□□ -1.25
HTT-210ENST00000512909 FOXO3O43524 673 aa7.25□□□□□ -1.25
HTT-210ENST00000512909 STAU1O95793 577 aaKnown RBP7.25□□□□□ -1.25
HTT-210ENST00000512909 PSMA6P60900 246 aaKnown RBP7.25□□□□□ -1.25
HTT-210ENST00000512909 LAPTM4AQ15012 233 aa7.25□□□□□ -1.25
HTT-210ENST00000512909 SLC9A9Q8IVB4 645 aa7.25□□□□□ -1.25
HTT-210ENST00000512909 MEIOBQ8N635 442 aa7.25□□□□□ -1.25
HTT-210ENST00000512909 BIN2Q9UBW5 565 aaPredicted RBP7.25□□□□□ -1.25
HTT-210ENST00000512909 CENPCQ03188 943 aa7.24□□□□□ -1.25
HTT-210ENST00000512909 LINC00528Q8N1L1 170 aa7.24□□□□□ -1.25
HTT-210ENST00000512909 SLC4A9Q96Q91 983 aa7.24□□□□□ -1.25
HTT-210ENST00000512909 NIFKQ9BYG3 293 aaKnown RBP7.24□□□□□ -1.25
HTT-210ENST00000512909 TSPAN10Q9H1Z9 355 aaPredicted RBP7.24□□□□□ -1.25
HTT-210ENST00000512909 SERTM1A2A2V5 107 aa7.23□□□□□ -1.25
HTT-210ENST00000512909 CDK2AP1O14519 115 aa7.23□□□□□ -1.25
HTT-210ENST00000512909 AXIN1O15169 862 aa7.23□□□□□ -1.25
HTT-210ENST00000512909 DGAT1O75907 488 aa7.23□□□□□ -1.25
HTT-210ENST00000512909 DKK1O94907 266 aa7.23□□□□□ -1.25
HTT-210ENST00000512909 IL2RAP01589 272 aa7.23□□□□□ -1.25
HTT-210ENST00000512909 FAM69CQ0P6D2 419 aa7.23□□□□□ -1.25
HTT-210ENST00000512909 TBCELQ5QJ74 424 aa7.23□□□□□ -1.25
HTT-210ENST00000512909 NEUROD4Q9HD90 331 aa7.23□□□□□ -1.25
HTT-210ENST00000512909 NRG2O14511 850 aaPredicted RBP7.22□□□□□ -1.25
HTT-210ENST00000512909 GPC1P35052 558 aa7.22□□□□□ -1.25
HTT-210ENST00000512909 AAMPQ13685 434 aa7.22□□□□□ -1.25
HTT-210ENST00000512909 CTC1Q2NKJ3 1217 aa7.22□□□□□ -1.25
HTT-210ENST00000512909 MRPL14Q6P1L8 145 aaKnown RBP7.22□□□□□ -1.25
HTT-210ENST00000512909 TRIM67Q6ZTA4 783 aa7.22□□□□□ -1.25
HTT-210ENST00000512909 GLYCTKQ8IVS8 523 aa7.22□□□□□ -1.25
HTT-210ENST00000512909 C1orf216Q8TAB5 229 aa7.22□□□□□ -1.25
HTT-210ENST00000512909 AIDAQ96BJ3 306 aa7.22□□□□□ -1.25
HTT-210ENST00000512909 NGLY1Q96IV0 654 aa7.22□□□□□ -1.25
HTT-210ENST00000512909 SCHIP1Q9P0W5 487 aaPredicted RBP7.22□□□□□ -1.25
HTT-210ENST00000512909 ABCC9O60706 1549 aa7.22□□□□□ -1.25
HTT-210ENST00000512909 WEE1P30291 646 aa7.21□□□□□ -1.26
HTT-210ENST00000512909 NBPF1Q3BBV0 1214 aa7.21□□□□□ -1.26
HTT-210ENST00000512909 INSM2Q96T92 566 aaPredicted RBP7.21□□□□□ -1.26
HTT-210ENST00000512909 KLF16Q9BXK1 252 aaPredicted RBP7.21□□□□□ -1.26
HTT-210ENST00000512909 TATP17735 454 aaPredicted RBP7.2□□□□□ -1.26
HTT-210ENST00000512909 NAA30Q147X3 362 aaPredicted RBP7.2□□□□□ -1.26
HTT-210ENST00000512909 RHBDD1Q8TEB9 315 aa7.2□□□□□ -1.26
HTT-210ENST00000512909 GNEQ9Y223 722 aaKnown RBP7.2□□□□□ -1.26
HTT-210ENST00000512909 SPINT1O43278 529 aa7.19□□□□□ -1.26
HTT-210ENST00000512909 PLA2G4AP47712 749 aa7.19□□□□□ -1.26
HTT-210ENST00000512909 FKBP5Q13451 457 aaPredicted RBP7.19□□□□□ -1.26
HTT-210ENST00000512909 MTFR1Q15390 333 aa7.19□□□□□ -1.26
HTT-210ENST00000512909 OCLNQ16625 522 aa7.19□□□□□ -1.26
HTT-210ENST00000512909 CCDC27Q2M243 656 aa7.19□□□□□ -1.26
HTT-210ENST00000512909 BICDL1Q6ZP65 573 aa7.19□□□□□ -1.26
HTT-210ENST00000512909 TAS1R3Q7RTX0 852 aa7.19□□□□□ -1.26
HTT-210ENST00000512909 LYSMD3Q7Z3D4 306 aa7.19□□□□□ -1.26
HTT-210ENST00000512909 PURBQ96QR8 312 aaKnown RBP7.19□□□□□ -1.26
HTT-210ENST00000512909 GJA3Q9Y6H8 435 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms