RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 TXNRD1Q16881 649 aa16.87■□□□□ 0.29
DEPDC1B-206ENST00000512452 PTF1AQ7RTS3 328 aa16.87■□□□□ 0.29
DEPDC1B-206ENST00000512452 IGSF1Q8N6C5 1336 aa16.87■□□□□ 0.29
DEPDC1B-206ENST00000512452 NFAT5O94916 1531 aa16.86■□□□□ 0.29
DEPDC1B-206ENST00000512452 TOMM70O94826 608 aa16.86■□□□□ 0.29
DEPDC1B-206ENST00000512452 ZNF853P0CG23 659 aa16.86■□□□□ 0.29
DEPDC1B-206ENST00000512452 HTRA3P83110 453 aa16.86■□□□□ 0.29
DEPDC1B-206ENST00000512452 SULT6B1Q6IMI4 303 aa16.86■□□□□ 0.29
DEPDC1B-206ENST00000512452 SLIT3O75094 1523 aa16.86■□□□□ 0.29
DEPDC1B-206ENST00000512452 WDR90Q96KV7 1748 aa16.85■□□□□ 0.29
DEPDC1B-206ENST00000512452 MSH5O43196 834 aa16.85■□□□□ 0.29
DEPDC1B-206ENST00000512452 CANXP27824 592 aaKnown RBP16.85■□□□□ 0.29
DEPDC1B-206ENST00000512452 POLD1P28340 1107 aa16.85■□□□□ 0.29
DEPDC1B-206ENST00000512452 HOXC9P31274 260 aa16.85■□□□□ 0.29
DEPDC1B-206ENST00000512452 EXOSC9Q06265 439 aaKnown RBP16.85■□□□□ 0.29
DEPDC1B-206ENST00000512452 ALDH1L2Q3SY69 923 aa16.85■□□□□ 0.29
DEPDC1B-206ENST00000512452 PAK3O75914 559 aaPredicted RBP16.84■□□□□ 0.29
DEPDC1B-206ENST00000512452 BRPF1P55201 1214 aaPredicted RBP16.84■□□□□ 0.29
DEPDC1B-206ENST00000512452 EVA1CP58658 441 aa16.84■□□□□ 0.29
DEPDC1B-206ENST00000512452 TRPM3Q9HCF6 1732 aaPredicted RBP16.84■□□□□ 0.29
DEPDC1B-206ENST00000512452 DLG5Q8TDM6 1919 aa16.84■□□□□ 0.29
DEPDC1B-206ENST00000512452 OVOS2A0A0G2JMS6 1433 aa16.83■□□□□ 0.28
DEPDC1B-206ENST00000512452 CHRNA2Q15822 529 aa16.83■□□□□ 0.28
DEPDC1B-206ENST00000512452 FAM161AQ3B820 660 aa16.83■□□□□ 0.28
DEPDC1B-206ENST00000512452 TSR2Q969E8 191 aaKnown RBP16.83■□□□□ 0.28
DEPDC1B-206ENST00000512452 CFAP44Q96MT7 982 aa16.83■□□□□ 0.28
DEPDC1B-206ENST00000512452 CENPQQ7L2Z9 268 aaPredicted RBP16.82■□□□□ 0.28
DEPDC1B-206ENST00000512452 IP6K1Q92551 441 aa16.82■□□□□ 0.28
DEPDC1B-206ENST00000512452 USP19O94966 1318 aa16.81■□□□□ 0.28
DEPDC1B-206ENST00000512452 KIF16BQ96L93 1317 aa16.81■□□□□ 0.28
DEPDC1B-206ENST00000512452 GOLGB1Q14789 3259 aaKnown RBP16.81■□□□□ 0.28
DEPDC1B-206ENST00000512452 HTATSF1O43719 755 aaKnown RBP16.81■□□□□ 0.28
DEPDC1B-206ENST00000512452 HSPA1AP0DMV8 641 aaKnown RBP16.81■□□□□ 0.28
DEPDC1B-206ENST00000512452 HSPA1BP0DMV9 641 aaKnown RBP16.81■□□□□ 0.28
DEPDC1B-206ENST00000512452 ZKSCAN2Q63HK3 967 aa16.81■□□□□ 0.28
DEPDC1B-206ENST00000512452 AEBP1Q8IUX7 1158 aa16.81■□□□□ 0.28
DEPDC1B-206ENST00000512452 GAS2L2Q8NHY3 880 aa16.81■□□□□ 0.28
DEPDC1B-206ENST00000512452 TNS2Q63HR2 1409 aa16.8■□□□□ 0.28
DEPDC1B-206ENST00000512452 SBF2Q86WG5 1849 aa16.8■□□□□ 0.28
DEPDC1B-206ENST00000512452 KDM2BQ8NHM5 1336 aa16.8■□□□□ 0.28
DEPDC1B-206ENST00000512452 SOX12O15370 315 aa16.8■□□□□ 0.28
DEPDC1B-206ENST00000512452 EYA1Q99502 592 aa16.8■□□□□ 0.28
DEPDC1B-206ENST00000512452 LTN1O94822 1766 aa16.79■□□□□ 0.28
DEPDC1B-206ENST00000512452 TCERG1O14776 1098 aaKnown RBP16.79■□□□□ 0.28
DEPDC1B-206ENST00000512452 IPO8O15397 1037 aaKnown RBP16.79■□□□□ 0.28
DEPDC1B-206ENST00000512452 SMC4Q9NTJ3 1288 aa16.79■□□□□ 0.28
DEPDC1B-206ENST00000512452 KIAA0232Q92628 1395 aa16.78■□□□□ 0.28
DEPDC1B-206ENST00000512452 THRAP3Q9Y2W1 955 aaKnown RBP16.78■□□□□ 0.28
DEPDC1B-206ENST00000512452 LARP1Q6PKG0 1096 aaKnown RBP16.77■□□□□ 0.28
DEPDC1B-206ENST00000512452 SLC16A10Q8TF71 515 aa16.77■□□□□ 0.28
DEPDC1B-206ENST00000512452 SSH1Q8WYL5 1049 aa16.77■□□□□ 0.28
DEPDC1B-206ENST00000512452 FRAT1Q92837 279 aaPredicted RBP16.77■□□□□ 0.28
DEPDC1B-206ENST00000512452 ALS2Q96Q42 1657 aa16.77■□□□□ 0.28
DEPDC1B-206ENST00000512452 NUTM2GQ5VZR2 741 aa16.76■□□□□ 0.27
DEPDC1B-206ENST00000512452 CLUAP1Q96AJ1 413 aa16.76■□□□□ 0.27
DEPDC1B-206ENST00000512452 MBIPQ9NS73 344 aa16.76■□□□□ 0.27
DEPDC1B-206ENST00000512452 CHL1O00533 1208 aa16.75■□□□□ 0.27
DEPDC1B-206ENST00000512452 ATF7IPQ6VMQ6 1270 aa16.75■□□□□ 0.27
DEPDC1B-206ENST00000512452 ARHGEF25Q86VW2 580 aa16.75■□□□□ 0.27
DEPDC1B-206ENST00000512452 DZIP1LQ8IYY4 767 aaKnown RBP16.75■□□□□ 0.27
DEPDC1B-206ENST00000512452 PANK1Q8TE04 598 aa16.75■□□□□ 0.27
DEPDC1B-206ENST00000512452 ARHGAP45Q92619 1136 aa16.75■□□□□ 0.27
DEPDC1B-206ENST00000512452 RBM19Q9Y4C8 960 aaKnown RBP16.75■□□□□ 0.27
DEPDC1B-206ENST00000512452 ABCC6O95255 1503 aa16.75■□□□□ 0.27
DEPDC1B-206ENST00000512452 CRB1P82279 1406 aa16.74■□□□□ 0.27
DEPDC1B-206ENST00000512452 NCAPD2Q15021 1401 aa16.74■□□□□ 0.27
DEPDC1B-206ENST00000512452 VAMP4O75379 141 aa16.74■□□□□ 0.27
DEPDC1B-206ENST00000512452 GCP02774 474 aa16.74■□□□□ 0.27
DEPDC1B-206ENST00000512452 THUMPD2Q9BTF0 503 aaKnown RBP16.74■□□□□ 0.27
DEPDC1B-206ENST00000512452 BABAM1Q9NWV8 329 aa16.74■□□□□ 0.27
DEPDC1B-206ENST00000512452 MVPQ14764 893 aaKnown RBP16.73■□□□□ 0.27
DEPDC1B-206ENST00000512452 MTHFSDQ2M296 383 aaKnown RBP16.73■□□□□ 0.27
DEPDC1B-206ENST00000512452 FTSJ3Q8IY81 847 aaKnown RBP16.73■□□□□ 0.27
DEPDC1B-206ENST00000512452 RTF1Q92541 710 aaKnown RBP16.73■□□□□ 0.27
DEPDC1B-206ENST00000512452 COG6Q9Y2V7 657 aa16.73■□□□□ 0.27
DEPDC1B-206ENST00000512452 LAS1LQ9Y4W2 734 aaKnown RBP16.73■□□□□ 0.27
DEPDC1B-206ENST00000512452 LRRC37A3O60309 1634 aa16.73■□□□□ 0.27
DEPDC1B-206ENST00000512452 PARP4Q9UKK3 1724 aaKnown RBP16.73■□□□□ 0.27
DEPDC1B-206ENST00000512452 ZC3H6P61129 1189 aaKnown RBP16.72■□□□□ 0.27
DEPDC1B-206ENST00000512452 BCL2L13Q9BXK5 485 aa16.72■□□□□ 0.27
DEPDC1B-206ENST00000512452 CHMP4BQ9H444 224 aaKnown RBP16.72■□□□□ 0.27
DEPDC1B-206ENST00000512452 SOS1Q07889 1333 aaPredicted RBP16.71■□□□□ 0.27
DEPDC1B-206ENST00000512452 RLBP1P12271 317 aa16.71■□□□□ 0.27
DEPDC1B-206ENST00000512452 TRIM27P14373 513 aa16.71■□□□□ 0.27
DEPDC1B-206ENST00000512452 TWISTNBQ3B726 338 aaPredicted RBP16.71■□□□□ 0.27
DEPDC1B-206ENST00000512452 DDX19BQ9UMR2 479 aa16.71■□□□□ 0.27
DEPDC1B-206ENST00000512452 PLEKHG2Q9H7P9 1386 aa16.71■□□□□ 0.27
DEPDC1B-206ENST00000512452 DDB1Q16531 1140 aa16.7■□□□□ 0.26
DEPDC1B-206ENST00000512452 MRPL50Q8N5N7 158 aaKnown RBP16.7■□□□□ 0.26
DEPDC1B-206ENST00000512452 RBM46Q8TBY0 533 aaKnown RBP16.7■□□□□ 0.26
DEPDC1B-206ENST00000512452 GNAT3A8MTJ3 354 aa16.69■□□□□ 0.26
DEPDC1B-206ENST00000512452 NOB1Q9ULX3 412 aaKnown RBP16.69■□□□□ 0.26
DEPDC1B-206ENST00000512452 CRYBG1Q9Y4K1 1723 aa16.68■□□□□ 0.26
DEPDC1B-206ENST00000512452 DCTN1Q14203 1278 aa16.68■□□□□ 0.26
DEPDC1B-206ENST00000512452 ZNF827Q17R98 1081 aa16.68■□□□□ 0.26
DEPDC1B-206ENST00000512452 MLLT1Q03111 559 aaPredicted RBP16.67■□□□□ 0.26
DEPDC1B-206ENST00000512452 MCM10Q7L590 875 aa16.67■□□□□ 0.26
DEPDC1B-206ENST00000512452 C8orf58Q8NAV2 365 aa16.67■□□□□ 0.26
DEPDC1B-206ENST00000512452 FSTL1Q12841 308 aa16.66■□□□□ 0.26
DEPDC1B-206ENST00000512452 COL24A1Q17RW2 1714 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms