RNA–Protein interactions for RNA: ENST00000512375.1

MRPS18C-208, Transcript of mitochondrial ribosomal protein S18C, human

TSL 2

Gene MRPS18C, Length 2,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS18C-208	ENST00000512375	TEF	Q10587	303 aa		13.79	□□□□□ -0.2
MRPS18C-208	ENST00000512375	CEP85	Q6P2H3	762 aa		13.79	□□□□□ -0.2
MRPS18C-208	ENST00000512375	C1orf141	Q5JVX7	400 aa		13.78	□□□□□ -0.2
MRPS18C-208	ENST00000512375	HDGFL1	Q5TGJ6	251 aa		13.78	□□□□□ -0.2
MRPS18C-208	ENST00000512375	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.78	□□□□□ -0.2
MRPS18C-208	ENST00000512375	DCTPP1	Q9H773	170 aa		13.78	□□□□□ -0.2
MRPS18C-208	ENST00000512375	CAMTA1	Q9Y6Y1	1673 aa		13.78	□□□□□ -0.2
MRPS18C-208	ENST00000512375	CABLES1	Q8TDN4	633 aa		13.78	□□□□□ -0.2
MRPS18C-208	ENST00000512375	TBC1D32	Q96NH3	1257 aa		13.77	□□□□□ -0.21
MRPS18C-208	ENST00000512375	KDM3B	Q7LBC6	1761 aa		13.77	□□□□□ -0.21
MRPS18C-208	ENST00000512375	KCNQ3	O43525	872 aa		13.76	□□□□□ -0.21
MRPS18C-208	ENST00000512375	EIF4A1	P60842	406 aa	Known RBP	13.76	□□□□□ -0.21
MRPS18C-208	ENST00000512375	BTBD11	A6QL63	1104 aa		13.76	□□□□□ -0.21
MRPS18C-208	ENST00000512375	RNMT	O43148	476 aa	Known RBP	13.76	□□□□□ -0.21
MRPS18C-208	ENST00000512375	XIRP1	Q702N8	1843 aa	Known RBP	13.76	□□□□□ -0.21
MRPS18C-208	ENST00000512375	TNS3	Q68CZ2	1445 aa		13.76	□□□□□ -0.21
MRPS18C-208	ENST00000512375	EIF2S2	P20042	333 aa	Known RBP	13.75	□□□□□ -0.21
MRPS18C-208	ENST00000512375	MFAP1	P55081	439 aa	Known RBP	13.75	□□□□□ -0.21
MRPS18C-208	ENST00000512375	BMP2KL	Q5H9B9	411 aa		13.75	□□□□□ -0.21
MRPS18C-208	ENST00000512375	BCL11A	Q9H165	835 aa		13.75	□□□□□ -0.21
MRPS18C-208	ENST00000512375	NLRP2	Q9NX02	1062 aa		13.75	□□□□□ -0.21
MRPS18C-208	ENST00000512375	LMTK3	Q96Q04	1460 aa		13.75	□□□□□ -0.21
MRPS18C-208	ENST00000512375	PHAX	Q9H814	394 aa	Known RBP	13.74	□□□□□ -0.21
MRPS18C-208	ENST00000512375	STRC	Q7RTU9	1775 aa		13.74	□□□□□ -0.21
MRPS18C-208	ENST00000512375	KDM4F	A0A1W2PPD8	638 aa		13.73	□□□□□ -0.21
MRPS18C-208	ENST00000512375	SPATA31A3	Q5VYP0	1347 aa		13.73	□□□□□ -0.21
MRPS18C-208	ENST00000512375	HOXB7	P09629	217 aa		13.73	□□□□□ -0.21
MRPS18C-208	ENST00000512375	CHRNA2	Q15822	529 aa		13.73	□□□□□ -0.21
MRPS18C-208	ENST00000512375	RAPGEF4	Q8WZA2	1011 aa		13.73	□□□□□ -0.21
MRPS18C-208	ENST00000512375	COL18A1	P39060	1754 aa		13.72	□□□□□ -0.21
MRPS18C-208	ENST00000512375	APBB1	O00213	710 aa		13.72	□□□□□ -0.21
MRPS18C-208	ENST00000512375	GNAI2	P04899	355 aa		13.72	□□□□□ -0.21
MRPS18C-208	ENST00000512375	C22orf23	Q9BZE7	217 aa		13.72	□□□□□ -0.21
MRPS18C-208	ENST00000512375	OVOS2	A0A0G2JMS6	1433 aa		13.72	□□□□□ -0.21
MRPS18C-208	ENST00000512375	HMMR	O75330	724 aa		13.72	□□□□□ -0.21
MRPS18C-208	ENST00000512375	CSB-PGBD3	P0DP91	1061 aa		13.72	□□□□□ -0.21
MRPS18C-208	ENST00000512375	BRINP3	Q76B58	766 aa		13.72	□□□□□ -0.21
MRPS18C-208	ENST00000512375	CHPF2	Q9P2E5	772 aa		13.72	□□□□□ -0.21
MRPS18C-208	ENST00000512375	PLEKHM2	Q8IWE5	1019 aa		13.71	□□□□□ -0.21
MRPS18C-208	ENST00000512375	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.71	□□□□□ -0.21
MRPS18C-208	ENST00000512375	CRYBG1	Q9Y4K1	1723 aa		13.71	□□□□□ -0.21
MRPS18C-208	ENST00000512375	GNAI3	P08754	354 aa		13.71	□□□□□ -0.21
MRPS18C-208	ENST00000512375	BECN1	Q14457	450 aa		13.71	□□□□□ -0.21
MRPS18C-208	ENST00000512375	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.71	□□□□□ -0.22
MRPS18C-208	ENST00000512375	PXDNL	A1KZ92	1463 aa		13.71	□□□□□ -0.22
MRPS18C-208	ENST00000512375	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.71	□□□□□ -0.22
MRPS18C-208	ENST00000512375	SMARCA5	O60264	1052 aa	Predicted RBP	13.7	□□□□□ -0.22
MRPS18C-208	ENST00000512375	ANXA1	P04083	346 aa		13.7	□□□□□ -0.22
MRPS18C-208	ENST00000512375	TAT	P17735	454 aa	Predicted RBP	13.7	□□□□□ -0.22
MRPS18C-208	ENST00000512375	CHMP4A	Q9BY43	222 aa		13.7	□□□□□ -0.22
MRPS18C-208	ENST00000512375	RTL5	Q5HYW3	569 aa	Predicted RBP	13.69	□□□□□ -0.22
MRPS18C-208	ENST00000512375	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.69	□□□□□ -0.22
MRPS18C-208	ENST00000512375	MEGF6	O75095	1541 aa		13.69	□□□□□ -0.22
MRPS18C-208	ENST00000512375	SIPA1L3	O60292	1781 aa	Predicted RBP	13.69	□□□□□ -0.22
MRPS18C-208	ENST00000512375	GSPT1	P15170	499 aa	Known RBP	13.69	□□□□□ -0.22
MRPS18C-208	ENST00000512375	AEBP2	Q6ZN18	517 aa	Predicted RBP	13.69	□□□□□ -0.22
MRPS18C-208	ENST00000512375	USP44	Q9H0E7	712 aa		13.69	□□□□□ -0.22
MRPS18C-208	ENST00000512375	GIGYF1	O75420	1035 aa	Predicted RBP	13.68	□□□□□ -0.22
MRPS18C-208	ENST00000512375	LRRFIP2	Q9Y608	721 aa	Known RBP	13.68	□□□□□ -0.22
MRPS18C-208	ENST00000512375	ADAMTS7	Q9UKP4	1686 aa		13.68	□□□□□ -0.22
MRPS18C-208	ENST00000512375	TBC1D9	Q6ZT07	1266 aa		13.68	□□□□□ -0.22
MRPS18C-208	ENST00000512375	SLAIN2	Q9P270	581 aa		13.68	□□□□□ -0.22
MRPS18C-208	ENST00000512375	PNMA6E	A0A0J9YXQ4	647 aa		13.67	□□□□□ -0.22
MRPS18C-208	ENST00000512375	PRAMEF22	A3QJZ6	481 aa		13.67	□□□□□ -0.22
MRPS18C-208	ENST00000512375	PI4KAP2	A4QPH2	592 aa		13.67	□□□□□ -0.22
MRPS18C-208	ENST00000512375	TTC22	Q5TAA0	569 aa		13.67	□□□□□ -0.22
MRPS18C-208	ENST00000512375	PI4KAP1	Q8N8J0	262 aa		13.67	□□□□□ -0.22
MRPS18C-208	ENST00000512375	SRCIN1	Q9C0H9	1055 aa		13.67	□□□□□ -0.22
MRPS18C-208	ENST00000512375	DBF4	Q9UBU7	674 aa	Predicted RBP	13.67	□□□□□ -0.22
MRPS18C-208	ENST00000512375	SPG7	Q9UQ90	795 aa		13.67	□□□□□ -0.22
MRPS18C-208	ENST00000512375	EXOC6B	Q9Y2D4	811 aa		13.67	□□□□□ -0.22
MRPS18C-208	ENST00000512375	CPD	O75976	1380 aa		13.67	□□□□□ -0.22
MRPS18C-208	ENST00000512375	UBTFL1	P0CB47	393 aa	Predicted RBP	13.67	□□□□□ -0.22
MRPS18C-208	ENST00000512375	PHKG2	P15735	406 aa		13.67	□□□□□ -0.22
MRPS18C-208	ENST00000512375	HEG1	Q9ULI3	1381 aa		13.67	□□□□□ -0.22
MRPS18C-208	ENST00000512375	KDM6A	O15550	1401 aa	Predicted RBP	13.67	□□□□□ -0.22
MRPS18C-208	ENST00000512375	ABCC6	O95255	1503 aa		13.67	□□□□□ -0.22
MRPS18C-208	ENST00000512375	SCN11A	Q9UI33	1791 aa		13.67	□□□□□ -0.22
MRPS18C-208	ENST00000512375	DNAAF4	Q8WXU2	420 aa		13.66	□□□□□ -0.22
MRPS18C-208	ENST00000512375	TBC1D2	Q9BYX2	928 aa		13.66	□□□□□ -0.22
MRPS18C-208	ENST00000512375	CDC45	O75419	566 aa		13.66	□□□□□ -0.22
MRPS18C-208	ENST00000512375	ATP8B2	P98198	1209 aa		13.66	□□□□□ -0.22
MRPS18C-208	ENST00000512375	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
MRPS18C-208	ENST00000512375	SLC39A6	Q13433	755 aa		13.65	□□□□□ -0.22
MRPS18C-208	ENST00000512375	PROSER3	Q2NL68	480 aa		13.65	□□□□□ -0.22
MRPS18C-208	ENST00000512375	IFNL2	Q8IZJ0	200 aa		13.65	□□□□□ -0.22
MRPS18C-208	ENST00000512375	SLC52A2	Q9HAB3	445 aa		13.65	□□□□□ -0.22
MRPS18C-208	ENST00000512375	ADCY9	O60503	1353 aa		13.65	□□□□□ -0.22
MRPS18C-208	ENST00000512375	SOS2	Q07890	1332 aa	Predicted RBP	13.65	□□□□□ -0.22
MRPS18C-208	ENST00000512375	RBM25	P49756	843 aa	Known RBP	13.65	□□□□□ -0.22
MRPS18C-208	ENST00000512375	BEND3	Q5T5X7	828 aa		13.65	□□□□□ -0.22
MRPS18C-208	ENST00000512375	NFATC2IP	Q8NCF5	419 aa		13.65	□□□□□ -0.22
MRPS18C-208	ENST00000512375	PRDM11	Q9NQV5	511 aa		13.65	□□□□□ -0.22
MRPS18C-208	ENST00000512375	ZNF790	Q6PG37	636 aa		13.64	□□□□□ -0.23
MRPS18C-208	ENST00000512375	CYP27B1	O15528	508 aa		13.64	□□□□□ -0.23
MRPS18C-208	ENST00000512375	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.63	□□□□□ -0.23
MRPS18C-208	ENST00000512375	SLK	Q9H2G2	1235 aa	Predicted RBP	13.63	□□□□□ -0.23
MRPS18C-208	ENST00000512375	LRRCC1	Q9C099	1032 aa		13.63	□□□□□ -0.23
MRPS18C-208	ENST00000512375	USP35	Q9P2H5	1018 aa		13.63	□□□□□ -0.23
MRPS18C-208	ENST00000512375	NFKBIB	Q15653	356 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms