RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 FLAD1Q8NFF5 587 aa9.82□□□□□ -0.84
NR1I3-231ENST00000512340 PNISRQ8TF01 805 aaKnown RBP9.82□□□□□ -0.84
NR1I3-231ENST00000512340 RUNDC1Q96C34 613 aa9.82□□□□□ -0.84
NR1I3-231ENST00000512340 BTAF1O14981 1849 aa9.82□□□□□ -0.84
NR1I3-231ENST00000512340 CALD1Q05682 793 aaKnown RBP9.81□□□□□ -0.84
NR1I3-231ENST00000512340 NPM2Q86SE8 214 aaKnown RBP9.81□□□□□ -0.84
NR1I3-231ENST00000512340 PHACTR3Q96KR7 559 aa9.81□□□□□ -0.84
NR1I3-231ENST00000512340 RBM42Q9BTD8 480 aaKnown RBP9.81□□□□□ -0.84
NR1I3-231ENST00000512340 TFCP2L1Q9NZI6 479 aa9.81□□□□□ -0.84
NR1I3-231ENST00000512340 SHANK3Q9BYB0 1731 aa9.81□□□□□ -0.84
NR1I3-231ENST00000512340 LOC102724428A0A0B4J2F2 783 aa9.8□□□□□ -0.84
NR1I3-231ENST00000512340 ATP6V1AP38606 617 aa9.8□□□□□ -0.84
NR1I3-231ENST00000512340 SIK1P57059 783 aa9.8□□□□□ -0.84
NR1I3-231ENST00000512340 PTF1AQ7RTS3 328 aa9.8□□□□□ -0.84
NR1I3-231ENST00000512340 AK7Q96M32 723 aa9.8□□□□□ -0.84
NR1I3-231ENST00000512340 TEX13AQ9BXU3 409 aaPredicted RBP9.8□□□□□ -0.84
NR1I3-231ENST00000512340 RIPK4P57078 832 aa9.79□□□□□ -0.84
NR1I3-231ENST00000512340 SLC15A2Q16348 729 aa9.79□□□□□ -0.84
NR1I3-231ENST00000512340 ATG3Q9NT62 314 aa9.79□□□□□ -0.84
NR1I3-231ENST00000512340 ASAP1Q9ULH1 1129 aa9.79□□□□□ -0.84
NR1I3-231ENST00000512340 ADAMTS8Q9UP79 889 aa9.79□□□□□ -0.84
NR1I3-231ENST00000512340 ITGB4P16144 1822 aa9.78□□□□□ -0.84
NR1I3-231ENST00000512340 BTBD11A6QL63 1104 aa9.78□□□□□ -0.84
NR1I3-231ENST00000512340 MSH5O43196 834 aa9.78□□□□□ -0.84
NR1I3-231ENST00000512340 TAF7Q15545 349 aaPredicted RBP9.78□□□□□ -0.84
NR1I3-231ENST00000512340 DIEXFQ68CQ4 756 aaKnown RBP9.78□□□□□ -0.84
NR1I3-231ENST00000512340 VSIG10Q8N0Z9 540 aa9.78□□□□□ -0.84
NR1I3-231ENST00000512340 NGEFQ8N5V2 710 aa9.78□□□□□ -0.84
NR1I3-231ENST00000512340 PLEKHF1Q96S99 279 aa9.78□□□□□ -0.84
NR1I3-231ENST00000512340 CHMP4AQ9BY43 222 aa9.78□□□□□ -0.84
NR1I3-231ENST00000512340 LGR6Q9HBX8 967 aa9.78□□□□□ -0.84
NR1I3-231ENST00000512340 KDM6AO15550 1401 aaPredicted RBP9.78□□□□□ -0.84
NR1I3-231ENST00000512340 PTCD1O75127 700 aaKnown RBP9.77□□□□□ -0.85
NR1I3-231ENST00000512340 STARD3NLO95772 234 aa9.77□□□□□ -0.85
NR1I3-231ENST00000512340 TMPOP42166 694 aaKnown RBP9.77□□□□□ -0.85
NR1I3-231ENST00000512340 PROM2Q8N271 834 aa9.77□□□□□ -0.85
NR1I3-231ENST00000512340 IL17REQ8NFR9 667 aa9.77□□□□□ -0.85
NR1I3-231ENST00000512340 SLC16A10Q8TF71 515 aa9.77□□□□□ -0.85
NR1I3-231ENST00000512340 FMNL2Q96PY5 1086 aa9.77□□□□□ -0.85
NR1I3-231ENST00000512340 BABAM1Q9NWV8 329 aa9.77□□□□□ -0.85
NR1I3-231ENST00000512340 CEMIPQ8WUJ3 1361 aa9.76□□□□□ -0.85
NR1I3-231ENST00000512340 SCN11AQ9UI33 1791 aa9.76□□□□□ -0.85
NR1I3-231ENST00000512340 CCER2I3L3R5 266 aa9.76□□□□□ -0.85
NR1I3-231ENST00000512340 NEUROD2Q15784 382 aa9.76□□□□□ -0.85
NR1I3-231ENST00000512340 RC3H1Q5TC82 1133 aaKnown RBP9.76□□□□□ -0.85
NR1I3-231ENST00000512340 ZNF790Q6PG37 636 aa9.76□□□□□ -0.85
NR1I3-231ENST00000512340 MCM10Q7L590 875 aa9.76□□□□□ -0.85
NR1I3-231ENST00000512340 CCDC146Q8IYE0 955 aa9.76□□□□□ -0.85
NR1I3-231ENST00000512340 MRC1P22897 1456 aa9.75□□□□□ -0.85
NR1I3-231ENST00000512340 ADRA2BP18089 450 aa9.75□□□□□ -0.85
NR1I3-231ENST00000512340 LRRC4BQ9NT99 713 aa9.75□□□□□ -0.85
NR1I3-231ENST00000512340 RTCBQ9Y3I0 505 aaKnown RBP9.75□□□□□ -0.85
NR1I3-231ENST00000512340 CHD4Q14839 1912 aa9.74□□□□□ -0.85
NR1I3-231ENST00000512340 TOGARAM1Q9Y4F4 1720 aa9.74□□□□□ -0.85
NR1I3-231ENST00000512340 CASZ1Q86V15 1759 aa9.74□□□□□ -0.85
NR1I3-231ENST00000512340 SNRPA1P09661 255 aaKnown RBP9.74□□□□□ -0.85
NR1I3-231ENST00000512340 SSFA2P28290 1259 aa9.74□□□□□ -0.85
NR1I3-231ENST00000512340 POLD1P28340 1107 aa9.74□□□□□ -0.85
NR1I3-231ENST00000512340 NCBP3Q53F19 620 aaKnown RBP9.74□□□□□ -0.85
NR1I3-231ENST00000512340 FAM9BQ8IZU0 186 aa9.74□□□□□ -0.85
NR1I3-231ENST00000512340 ZNF784Q8NCA9 323 aaPredicted RBP9.74□□□□□ -0.85
NR1I3-231ENST00000512340 AKT1S1Q96B36 256 aa9.74□□□□□ -0.85
NR1I3-231ENST00000512340 BCL11AQ9H165 835 aa9.74□□□□□ -0.85
NR1I3-231ENST00000512340 UTRNP46939 3433 aa9.74□□□□□ -0.85
NR1I3-231ENST00000512340 LY75O60449 1722 aa9.73□□□□□ -0.85
NR1I3-231ENST00000512340 A0A087WZG4 1122 aa9.73□□□□□ -0.85
NR1I3-231ENST00000512340 APAF1O14727 1248 aa9.73□□□□□ -0.85
NR1I3-231ENST00000512340 GNPATO15228 680 aa9.73□□□□□ -0.85
NR1I3-231ENST00000512340 SLC39A6Q13433 755 aa9.73□□□□□ -0.85
NR1I3-231ENST00000512340 TRAPPC3LQ5T215 181 aa9.73□□□□□ -0.85
NR1I3-231ENST00000512340 MTFR1LQ9H019 292 aa9.73□□□□□ -0.85
NR1I3-231ENST00000512340 ANO8Q9HCE9 1232 aaPredicted RBP9.73□□□□□ -0.85
NR1I3-231ENST00000512340 TSPYL4Q9UJ04 414 aa9.73□□□□□ -0.85
NR1I3-231ENST00000512340 CNTNAP4Q9C0A0 1308 aa9.73□□□□□ -0.85
NR1I3-231ENST00000512340 RFC4P35249 363 aa9.72□□□□□ -0.85
NR1I3-231ENST00000512340 KCNQ4P56696 695 aa9.72□□□□□ -0.85
NR1I3-231ENST00000512340 GNAI1P63096 354 aa9.72□□□□□ -0.85
NR1I3-231ENST00000512340 DCTN1Q14203 1278 aa9.72□□□□□ -0.85
NR1I3-231ENST00000512340 CCDC87Q9NVE4 849 aa9.72□□□□□ -0.85
NR1I3-231ENST00000512340 RRP7AQ9Y3A4 280 aaKnown RBP9.72□□□□□ -0.85
NR1I3-231ENST00000512340 LAS1LQ9Y4W2 734 aaKnown RBP9.72□□□□□ -0.85
NR1I3-231ENST00000512340 ZNF831Q5JPB2 1677 aa9.71□□□□□ -0.85
NR1I3-231ENST00000512340 ADAMTS7Q9UKP4 1686 aa9.71□□□□□ -0.85
NR1I3-231ENST00000512340 ZPR1O75312 459 aa9.71□□□□□ -0.86
NR1I3-231ENST00000512340 RPS6KA4O75676 772 aa9.71□□□□□ -0.86
NR1I3-231ENST00000512340 PHF14O94880 888 aa9.71□□□□□ -0.86
NR1I3-231ENST00000512340 CRKLP46109 303 aaKnown RBP9.71□□□□□ -0.86
NR1I3-231ENST00000512340 C1QTNF8P60827 252 aa9.71□□□□□ -0.86
NR1I3-231ENST00000512340 LINC00116Q8NCU8 138 aa9.71□□□□□ -0.86
NR1I3-231ENST00000512340 ZNF496Q96IT1 587 aaPredicted RBP9.71□□□□□ -0.86
NR1I3-231ENST00000512340 HEG1Q9ULI3 1381 aa9.71□□□□□ -0.86
NR1I3-231ENST00000512340 SENP3-EIF4A1A0A087X0R7 540 aa9.7□□□□□ -0.86
NR1I3-231ENST00000512340 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.7□□□□□ -0.86
NR1I3-231ENST00000512340 PTGER2P43116 358 aa9.7□□□□□ -0.86
NR1I3-231ENST00000512340 ITPK1Q13572 414 aa9.7□□□□□ -0.86
NR1I3-231ENST00000512340 ZNF827Q17R98 1081 aa9.7□□□□□ -0.86
NR1I3-231ENST00000512340 CCDC27Q2M243 656 aa9.7□□□□□ -0.86
NR1I3-231ENST00000512340 DNAJC10Q8IXB1 793 aa9.7□□□□□ -0.86
NR1I3-231ENST00000512340 C5P01031 1676 aa9.7□□□□□ -0.86
NR1I3-231ENST00000512340 VIRMAQ69YN4 1812 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms