RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 ACEP12821 1306 aa9.54□□□□□ -0.88
NEK1-208ENST00000512193 FOXO3O43524 673 aa9.54□□□□□ -0.88
NEK1-208ENST00000512193 KLHL40Q2TBA0 621 aa9.54□□□□□ -0.88
NEK1-208ENST00000512193 TTLL5Q6EMB2 1281 aa9.54□□□□□ -0.88
NEK1-208ENST00000512193 LIMCH1Q9UPQ0 1083 aa9.54□□□□□ -0.88
NEK1-208ENST00000512193 PI4KAP2A4QPH2 592 aa9.54□□□□□ -0.88
NEK1-208ENST00000512193 MAP3K11Q16584 847 aa9.54□□□□□ -0.88
NEK1-208ENST00000512193 TOM1L2Q6ZVM7 507 aa9.54□□□□□ -0.88
NEK1-208ENST00000512193 ANKRD44Q8N8A2 993 aa9.54□□□□□ -0.88
NEK1-208ENST00000512193 PI4KAP1Q8N8J0 262 aa9.54□□□□□ -0.88
NEK1-208ENST00000512193 KDM2BQ8NHM5 1336 aa9.54□□□□□ -0.88
NEK1-208ENST00000512193 GPS2Q13227 327 aa9.53□□□□□ -0.88
NEK1-208ENST00000512193 CCDC57Q2TAC2 916 aa9.53□□□□□ -0.88
NEK1-208ENST00000512193 NOL10Q9BSC4 688 aaKnown RBP9.53□□□□□ -0.88
NEK1-208ENST00000512193 UHRF1BP1Q6BDS2 1440 aa9.53□□□□□ -0.88
NEK1-208ENST00000512193 COL17A1Q9UMD9 1497 aaPredicted RBP9.53□□□□□ -0.88
NEK1-208ENST00000512193 PTCD1O75127 700 aaKnown RBP9.53□□□□□ -0.88
NEK1-208ENST00000512193 ANKLE2Q86XL3 938 aa9.53□□□□□ -0.88
NEK1-208ENST00000512193 TMX3Q96JJ7 454 aa9.53□□□□□ -0.88
NEK1-208ENST00000512193 TFIP11Q9UBB9 837 aaKnown RBP9.53□□□□□ -0.88
NEK1-208ENST00000512193 DUOX2Q9NRD8 1548 aa9.53□□□□□ -0.88
NEK1-208ENST00000512193 PDE1AP54750 535 aa9.53□□□□□ -0.88
NEK1-208ENST00000512193 SART3Q15020 963 aaKnown RBP9.53□□□□□ -0.88
NEK1-208ENST00000512193 AMOTL1Q8IY63 956 aa9.53□□□□□ -0.88
NEK1-208ENST00000512193 CFAP45Q9UL16 551 aa9.53□□□□□ -0.88
NEK1-208ENST00000512193 SPATA31E1Q6ZUB1 1445 aa9.53□□□□□ -0.88
NEK1-208ENST00000512193 ARHGEF12Q9NZN5 1544 aa9.53□□□□□ -0.88
NEK1-208ENST00000512193 A2MP01023 1474 aa9.53□□□□□ -0.88
NEK1-208ENST00000512193 BRPF1P55201 1214 aaPredicted RBP9.53□□□□□ -0.88
NEK1-208ENST00000512193 KRT32Q14532 448 aa9.53□□□□□ -0.88
NEK1-208ENST00000512193 ARGLU1Q9NWB6 273 aaPredicted RBP9.53□□□□□ -0.88
NEK1-208ENST00000512193 KIF6Q6ZMV9 814 aa9.52□□□□□ -0.88
NEK1-208ENST00000512193 CKAP2LQ8IYA6 745 aa9.52□□□□□ -0.88
NEK1-208ENST00000512193 CCDC47Q96A33 483 aaKnown RBP9.52□□□□□ -0.88
NEK1-208ENST00000512193 SERPINC1P01008 464 aa9.52□□□□□ -0.89
NEK1-208ENST00000512193 CCDC183Q5T5S1 534 aa9.52□□□□□ -0.89
NEK1-208ENST00000512193 CCDC112Q8NEF3 446 aa9.52□□□□□ -0.89
NEK1-208ENST00000512193 PRDM11Q9NQV5 511 aa9.52□□□□□ -0.89
NEK1-208ENST00000512193 RRP9O43818 475 aaKnown RBP9.52□□□□□ -0.89
NEK1-208ENST00000512193 LARP1Q6PKG0 1096 aaKnown RBP9.52□□□□□ -0.89
NEK1-208ENST00000512193 MYD88Q99836 296 aa9.52□□□□□ -0.89
NEK1-208ENST00000512193 XBP1P17861 261 aa9.51□□□□□ -0.89
NEK1-208ENST00000512193 GUCY1B3Q02153 619 aa9.51□□□□□ -0.89
NEK1-208ENST00000512193 FAM177A1Q8N128 213 aaPredicted RBP9.51□□□□□ -0.89
NEK1-208ENST00000512193 ECHDC1Q9NTX5 307 aa9.51□□□□□ -0.89
NEK1-208ENST00000512193 DBF4Q9UBU7 674 aaPredicted RBP9.51□□□□□ -0.89
NEK1-208ENST00000512193 PHF8Q9UPP1 1060 aa9.51□□□□□ -0.89
NEK1-208ENST00000512193 TEX35Q5T0J7 233 aa9.51□□□□□ -0.89
NEK1-208ENST00000512193 JMYQ8N9B5 988 aa9.51□□□□□ -0.89
NEK1-208ENST00000512193 KIAA0556O60303 1618 aa9.51□□□□□ -0.89
NEK1-208ENST00000512193 ITSN2Q9NZM3 1697 aa9.51□□□□□ -0.89
NEK1-208ENST00000512193 KCNH5Q8NCM2 988 aa9.51□□□□□ -0.89
NEK1-208ENST00000512193 SNX21Q969T3 373 aa9.51□□□□□ -0.89
NEK1-208ENST00000512193 NCKAP5LQ9HCH0 1330 aa9.51□□□□□ -0.89
NEK1-208ENST00000512193 PPFIA3O75145 1194 aa9.51□□□□□ -0.89
NEK1-208ENST00000512193 EIF4A2Q14240 407 aaKnown RBP9.51□□□□□ -0.89
NEK1-208ENST00000512193 ZSCAN23Q3MJ62 389 aa9.51□□□□□ -0.89
NEK1-208ENST00000512193 STX6O43752 255 aa9.5□□□□□ -0.89
NEK1-208ENST00000512193 CEP57L1Q8IYX8 460 aa9.5□□□□□ -0.89
NEK1-208ENST00000512193 RHPN1Q8TCX5 695 aa9.5□□□□□ -0.89
NEK1-208ENST00000512193 JARID2Q92833 1246 aaPredicted RBP9.5□□□□□ -0.89
NEK1-208ENST00000512193 TCEANC2Q96MN5 208 aa9.5□□□□□ -0.89
NEK1-208ENST00000512193 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.5□□□□□ -0.893e-6■■□□□ 12.4
NEK1-208ENST00000512193 DCTPP1Q9H773 170 aa9.5□□□□□ -0.89
NEK1-208ENST00000512193 SH2B1Q9NRF2 756 aaPredicted RBP9.5□□□□□ -0.89
NEK1-208ENST00000512193 IDH1O75874 414 aaKnown RBP9.5□□□□□ -0.89
NEK1-208ENST00000512193 CCDC70Q6NSX1 233 aa9.5□□□□□ -0.89
NEK1-208ENST00000512193 BRMS1Q9HCU9 246 aa9.5□□□□□ -0.89
NEK1-208ENST00000512193 DENND4BO75064 1496 aaPredicted RBP9.5□□□□□ -0.89
NEK1-208ENST00000512193 TTC21BQ7Z4L5 1316 aa9.5□□□□□ -0.89
NEK1-208ENST00000512193 MAGI3Q5TCQ9 1506 aa9.5□□□□□ -0.89
NEK1-208ENST00000512193 NUP133Q8WUM0 1156 aa9.5□□□□□ -0.89
NEK1-208ENST00000512193 SCAND2PQ9GZW5 306 aaPredicted RBP9.5□□□□□ -0.89
NEK1-208ENST00000512193 DNMT1P26358 1616 aaKnown RBP9.5□□□□□ -0.89
NEK1-208ENST00000512193 HCLS1P14317 486 aaPredicted RBP9.49□□□□□ -0.89
NEK1-208ENST00000512193 ZGPATQ8N5A5 531 aaKnown RBP9.49□□□□□ -0.89
NEK1-208ENST00000512193 MAP3K2Q9Y2U5 619 aa9.49□□□□□ -0.89
NEK1-208ENST00000512193 DISP1Q96F81 1524 aa9.49□□□□□ -0.89
NEK1-208ENST00000512193 GJB2P29033 226 aa9.49□□□□□ -0.89
NEK1-208ENST00000512193 PLEKHM2Q8IWE5 1019 aa9.49□□□□□ -0.89
NEK1-208ENST00000512193 CTNNA3Q9UI47 895 aa9.49□□□□□ -0.89
NEK1-208ENST00000512193 A0A1W2PP64 1363 aa9.49□□□□□ -0.89
NEK1-208ENST00000512193 ZBTB7BO15156 539 aaPredicted RBP9.49□□□□□ -0.89
NEK1-208ENST00000512193 NECAB1Q8N987 351 aa9.49□□□□□ -0.89
NEK1-208ENST00000512193 ESYT1Q9BSJ8 1104 aa9.49□□□□□ -0.89
NEK1-208ENST00000512193 TRIM22Q8IYM9 498 aa9.49□□□□□ -0.89
NEK1-208ENST00000512193 A0A087WZG4 1122 aa9.48□□□□□ -0.89
NEK1-208ENST00000512193 CEP85Q6P2H3 762 aa9.48□□□□□ -0.89
NEK1-208ENST00000512193 OTUD7AQ8TE49 926 aaPredicted RBP9.48□□□□□ -0.89
NEK1-208ENST00000512193 CEP89Q96ST8 783 aa9.48□□□□□ -0.89
NEK1-208ENST00000512193 ATP5J2-PTCD1G3V325 749 aa9.48□□□□□ -0.89
NEK1-208ENST00000512193 CCT2P78371 535 aaKnown RBP9.48□□□□□ -0.89
NEK1-208ENST00000512193 AMOTQ4VCS5 1084 aa9.48□□□□□ -0.89
NEK1-208ENST00000512193 MPHOSPH8Q99549 860 aa9.48□□□□□ -0.89
NEK1-208ENST00000512193 TRIM35Q9UPQ4 493 aa9.48□□□□□ -0.89
NEK1-208ENST00000512193 U3KPZ7 1027 aaPredicted RBP9.48□□□□□ -0.89
NEK1-208ENST00000512193 ADAMTS12P58397 1594 aa9.48□□□□□ -0.89
NEK1-208ENST00000512193 IFIT1P09914 478 aaKnown RBP9.48□□□□□ -0.89
NEK1-208ENST00000512193 NAP1L1P55209 391 aaKnown RBP9.48□□□□□ -0.89
NEK1-208ENST00000512193 GIMAP6Q6P9H5 292 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms