RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 RIPK4P57078 832 aa10.51□□□□□ -0.73
HTT-209ENST00000512068 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.51□□□□□ -0.73
HTT-209ENST00000512068 WDR63Q8IWG1 891 aa10.51□□□□□ -0.73
HTT-209ENST00000512068 WWC1Q8IX03 1113 aa10.51□□□□□ -0.73
HTT-209ENST00000512068 CDCA7LQ96GN5 454 aa10.51□□□□□ -0.73
HTT-209ENST00000512068 PLEKHF1Q96S99 279 aa10.51□□□□□ -0.73
HTT-209ENST00000512068 RCAN3Q9UKA8 241 aa10.51□□□□□ -0.73
HTT-209ENST00000512068 NFAT5O94916 1531 aa10.51□□□□□ -0.73
HTT-209ENST00000512068 ZNF521Q96K83 1311 aa10.51□□□□□ -0.73
HTT-209ENST00000512068 TULP1O00294 542 aaPredicted RBP10.5□□□□□ -0.73
HTT-209ENST00000512068 TBC1D12O60347 775 aa10.5□□□□□ -0.73
HTT-209ENST00000512068 GCP02774 474 aa10.5□□□□□ -0.73
HTT-209ENST00000512068 SLFN5Q08AF3 891 aa10.5□□□□□ -0.73
HTT-209ENST00000512068 NFE2L2Q16236 605 aa10.5□□□□□ -0.73
HTT-209ENST00000512068 SULT6B1Q6IMI4 303 aa10.5□□□□□ -0.73
HTT-209ENST00000512068 BRINP3Q76B58 766 aa10.5□□□□□ -0.73
HTT-209ENST00000512068 LTV1Q96GA3 475 aaPredicted RBP10.5□□□□□ -0.73
HTT-209ENST00000512068 USP19O94966 1318 aa10.5□□□□□ -0.73
HTT-209ENST00000512068 PXDNQ92626 1479 aa10.49□□□□□ -0.73
HTT-209ENST00000512068 PHRF1Q9P1Y6 1649 aaKnown RBP10.49□□□□□ -0.73
HTT-209ENST00000512068 SMYD5Q6GMV2 418 aa10.49□□□□□ -0.73
HTT-209ENST00000512068 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.49□□□□□ -0.73
HTT-209ENST00000512068 IP6K1Q92551 441 aa10.49□□□□□ -0.73
HTT-209ENST00000512068 RGPD1P0DJD0 1748 aa10.49□□□□□ -0.73
HTT-209ENST00000512068 DUSP27Q5VZP5 1158 aa10.48□□□□□ -0.73
HTT-209ENST00000512068 ERICH6BQ5W0A0 696 aa10.48□□□□□ -0.73
HTT-209ENST00000512068 DDX17Q92841 729 aaKnown RBP10.48□□□□□ -0.73
HTT-209ENST00000512068 SPATA31A3Q5VYP0 1347 aa10.48□□□□□ -0.73
HTT-209ENST00000512068 DLG5Q8TDM6 1919 aa10.47□□□□□ -0.73
HTT-209ENST00000512068 TPRNQ4KMQ1 711 aa10.47□□□□□ -0.73
HTT-209ENST00000512068 IL16Q14005 1332 aa10.47□□□□□ -0.73
HTT-209ENST00000512068 IGSF1Q8N6C5 1336 aa10.47□□□□□ -0.73
HTT-209ENST00000512068 MED1Q15648 1581 aaPredicted RBP10.47□□□□□ -0.73
HTT-209ENST00000512068 NHSL1Q5SYE7 1610 aa10.47□□□□□ -0.73
HTT-209ENST00000512068 HOXB3P14651 431 aaPredicted RBP10.46□□□□□ -0.73
HTT-209ENST00000512068 MLLT3P42568 568 aaPredicted RBP10.46□□□□□ -0.73
HTT-209ENST00000512068 ARHGEF25Q86VW2 580 aa10.46□□□□□ -0.73
HTT-209ENST00000512068 GAS2L2Q8NHY3 880 aa10.46□□□□□ -0.73
HTT-209ENST00000512068 RTF1Q92541 710 aaKnown RBP10.46□□□□□ -0.73
HTT-209ENST00000512068 OTUD5Q96G74 571 aa10.46□□□□□ -0.73
HTT-209ENST00000512068 SOS2Q07890 1332 aaPredicted RBP10.45□□□□□ -0.74
HTT-209ENST00000512068 EVI5O60447 810 aa10.45□□□□□ -0.74
HTT-209ENST00000512068 CANXP27824 592 aaKnown RBP10.45□□□□□ -0.74
HTT-209ENST00000512068 PTGER2P43116 358 aa10.45□□□□□ -0.74
HTT-209ENST00000512068 RRP1P56182 461 aaKnown RBP10.45□□□□□ -0.74
HTT-209ENST00000512068 ZC3H6P61129 1189 aaKnown RBP10.45□□□□□ -0.74
HTT-209ENST00000512068 IRX6P78412 446 aaPredicted RBP10.45□□□□□ -0.74
HTT-209ENST00000512068 DOK7Q18PE1 504 aa10.45□□□□□ -0.74
HTT-209ENST00000512068 LHX8Q68G74 356 aa10.45□□□□□ -0.74
HTT-209ENST00000512068 AEBP1Q8IUX7 1158 aa10.45□□□□□ -0.74
HTT-209ENST00000512068 EYA1Q99502 592 aa10.45□□□□□ -0.74
HTT-209ENST00000512068 PCDHGA4Q9Y5G9 962 aa10.45□□□□□ -0.74
HTT-209ENST00000512068 ROBO1Q9Y6N7 1651 aa10.44□□□□□ -0.74
HTT-209ENST00000512068 LTBP4Q8N2S1 1624 aa10.44□□□□□ -0.74
HTT-209ENST00000512068 ABCC6O95255 1503 aa10.44□□□□□ -0.74
HTT-209ENST00000512068 CSB-PGBD3P0DP91 1061 aa10.44□□□□□ -0.74
HTT-209ENST00000512068 ANKRD24Q8TF21 1146 aa10.44□□□□□ -0.74
HTT-209ENST00000512068 PHACTR3Q96KR7 559 aa10.44□□□□□ -0.74
HTT-209ENST00000512068 ANO8Q9HCE9 1232 aaPredicted RBP10.44□□□□□ -0.74
HTT-209ENST00000512068 LAS1LQ9Y4W2 734 aaKnown RBP10.44□□□□□ -0.74
HTT-209ENST00000512068 FAM208AQ9UK61 1670 aaKnown RBP10.44□□□□□ -0.74
HTT-209ENST00000512068 KDRP35968 1356 aa10.43□□□□□ -0.74
HTT-209ENST00000512068 TOM1O60784 492 aa10.43□□□□□ -0.74
HTT-209ENST00000512068 CT47B1P0C2W7 299 aaPredicted RBP10.43□□□□□ -0.74
HTT-209ENST00000512068 PRKCSHP14314 528 aaPredicted RBP10.43□□□□□ -0.74
HTT-209ENST00000512068 GNAI1P63096 354 aa10.43□□□□□ -0.74
HTT-209ENST00000512068 TRMT2AQ8IZ69 625 aaKnown RBP10.43□□□□□ -0.74
HTT-209ENST00000512068 RGPD5Q99666 1765 aa10.43□□□□□ -0.74
HTT-209ENST00000512068 CRYBG1Q9Y4K1 1723 aa10.42□□□□□ -0.74
HTT-209ENST00000512068 ZSWIM6Q9HCJ5 1215 aa10.42□□□□□ -0.74
HTT-209ENST00000512068 PRDM11Q9NQV5 511 aa10.42□□□□□ -0.74
HTT-209ENST00000512068 RGPD2P0DJD1 1756 aa10.42□□□□□ -0.74
HTT-209ENST00000512068 RNF123Q5XPI4 1314 aa10.41□□□□□ -0.74
HTT-209ENST00000512068 FANCIQ9NVI1 1328 aa10.41□□□□□ -0.74
HTT-209ENST00000512068 USHBP1Q8N6Y0 703 aa10.41□□□□□ -0.74
HTT-209ENST00000512068 CABLES1Q8TDN4 633 aa10.41□□□□□ -0.74
HTT-209ENST00000512068 LRRC59Q96AG4 307 aaKnown RBP10.41□□□□□ -0.74
HTT-209ENST00000512068 IFT57Q9NWB7 429 aa10.41□□□□□ -0.74
HTT-209ENST00000512068 CPDO75976 1380 aa10.4□□□□□ -0.74
HTT-209ENST00000512068 AHDC1Q5TGY3 1603 aaPredicted RBP10.4□□□□□ -0.74
HTT-209ENST00000512068 KIAA0232Q92628 1395 aa10.4□□□□□ -0.74
HTT-209ENST00000512068 RIMBP2O15034 1052 aa10.4□□□□□ -0.74
HTT-209ENST00000512068 SNPHO15079 494 aa10.4□□□□□ -0.74
HTT-209ENST00000512068 PLEKHO1Q53GL0 409 aaPredicted RBP10.4□□□□□ -0.74
HTT-209ENST00000512068 NLRP2Q9NX02 1062 aa10.4□□□□□ -0.74
HTT-209ENST00000512068 PPP4R2Q9NY27 417 aa10.4□□□□□ -0.74
HTT-209ENST00000512068 PHLPP1O60346 1717 aa10.4□□□□□ -0.74
HTT-209ENST00000512068 ABCA3Q99758 1704 aa10.4□□□□□ -0.74
HTT-209ENST00000512068 ERBB3P21860 1342 aa10.39□□□□□ -0.75
HTT-209ENST00000512068 GNAT3A8MTJ3 354 aa10.39□□□□□ -0.75
HTT-209ENST00000512068 HTATSF1O43719 755 aaKnown RBP10.39□□□□□ -0.75
HTT-209ENST00000512068 MTHFSDQ2M296 383 aaKnown RBP10.39□□□□□ -0.75
HTT-209ENST00000512068 AMOTQ4VCS5 1084 aa10.39□□□□□ -0.75
HTT-209ENST00000512068 C1orf141Q5JVX7 400 aa10.39□□□□□ -0.75
HTT-209ENST00000512068 NBPF6Q5VWK0 638 aa10.39□□□□□ -0.75
HTT-209ENST00000512068 RAPGEF4Q8WZA2 1011 aa10.39□□□□□ -0.75
HTT-209ENST00000512068 TSR2Q969E8 191 aaKnown RBP10.39□□□□□ -0.75
HTT-209ENST00000512068 NBPF4Q96M43 638 aa10.39□□□□□ -0.75
HTT-209ENST00000512068 MAP3K5Q99683 1374 aa10.39□□□□□ -0.75
HTT-209ENST00000512068 CAMTA1Q9Y6Y1 1673 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms