RNA–Protein interactions for RNA: ENST00000511752.5

PTCD2-209, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 3

Gene PTCD2, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-209ENST00000511752 MAP3K5Q99683 1374 aa16.62■□□□□ 0.25
PTCD2-209ENST00000511752 PHACTR3Q96KR7 559 aa16.61■□□□□ 0.25
PTCD2-209ENST00000511752 PNNQ9H307 717 aaKnown RBP16.61■□□□□ 0.25
PTCD2-209ENST00000511752 LGR6Q9HBX8 967 aa16.61■□□□□ 0.25
PTCD2-209ENST00000511752 ATG3Q9NT62 314 aa16.61■□□□□ 0.25
PTCD2-209ENST00000511752 QSER1Q2KHR3 1735 aa16.61■□□□□ 0.25
PTCD2-209ENST00000511752 CASZ1Q86V15 1759 aa16.61■□□□□ 0.25
PTCD2-209ENST00000511752 LOC102724428A0A0B4J2F2 783 aa16.6■□□□□ 0.25
PTCD2-209ENST00000511752 SIK1P57059 783 aa16.6■□□□□ 0.25
PTCD2-209ENST00000511752 ZNF827Q17R98 1081 aa16.6■□□□□ 0.25
PTCD2-209ENST00000511752 AKT1S1Q96B36 256 aa16.6■□□□□ 0.25
PTCD2-209ENST00000511752 SLC52A2Q9HAB3 445 aa16.6■□□□□ 0.25
PTCD2-209ENST00000511752 MRC1P22897 1456 aa16.6■□□□□ 0.25
PTCD2-209ENST00000511752 TFCP2L1Q9NZI6 479 aa16.59■□□□□ 0.25
PTCD2-209ENST00000511752 ZNF831Q5JPB2 1677 aa16.59■□□□□ 0.25
PTCD2-209ENST00000511752 ATP6V1AP38606 617 aa16.58■□□□□ 0.24
PTCD2-209ENST00000511752 RBM42Q9BTD8 480 aaKnown RBP16.58■□□□□ 0.24
PTCD2-209ENST00000511752 C4BP0C0L5 1744 aa16.58■□□□□ 0.24
PTCD2-209ENST00000511752 TUBGCP6Q96RT7 1819 aa16.58■□□□□ 0.24
PTCD2-209ENST00000511752 TEFQ10587 303 aa16.57■□□□□ 0.24
PTCD2-209ENST00000511752 MAPK8IP3Q9UPT6 1336 aa16.56■□□□□ 0.24
PTCD2-209ENST00000511752 RTF1Q92541 710 aaKnown RBP16.56■□□□□ 0.24
PTCD2-209ENST00000511752 SPON1Q9HCB6 807 aa16.56■□□□□ 0.24
PTCD2-209ENST00000511752 WDR43Q15061 677 aaKnown RBP eCLIP16.55■□□□□ 0.24
PTCD2-209ENST00000511752 AK7Q96M32 723 aa16.55■□□□□ 0.24
PTCD2-209ENST00000511752 PDGFDQ9GZP0 370 aaPredicted RBP16.55■□□□□ 0.24
PTCD2-209ENST00000511752 DLG5Q8TDM6 1919 aa16.55■□□□□ 0.24
PTCD2-209ENST00000511752 SIPA1L3O60292 1781 aaPredicted RBP16.54■□□□□ 0.24
PTCD2-209ENST00000511752 PNPLA7Q6ZV29 1317 aa16.54■□□□□ 0.24
PTCD2-209ENST00000511752 ANP32CO43423 234 aa16.54■□□□□ 0.24
PTCD2-209ENST00000511752 PTCD1O75127 700 aaKnown RBP16.54■□□□□ 0.24
PTCD2-209ENST00000511752 ITPK1Q13572 414 aa16.54■□□□□ 0.24
PTCD2-209ENST00000511752 IL17REQ8NFR9 667 aa16.54■□□□□ 0.24
PTCD2-209ENST00000511752 PLEKHF1Q96S99 279 aa16.54■□□□□ 0.24
PTCD2-209ENST00000511752 CEMIPQ8WUJ3 1361 aa16.53■□□□□ 0.24
PTCD2-209ENST00000511752 HTATSF1O43719 755 aaKnown RBP16.53■□□□□ 0.24
PTCD2-209ENST00000511752 ZBTB7AO95365 584 aa16.53■□□□□ 0.24
PTCD2-209ENST00000511752 LINC00116Q8NCU8 138 aa16.53■□□□□ 0.24
PTCD2-209ENST00000511752 FLAD1Q8NFF5 587 aa16.53■□□□□ 0.24
PTCD2-209ENST00000511752 SLC16A10Q8TF71 515 aa16.53■□□□□ 0.24
PTCD2-209ENST00000511752 TTC5Q8N0Z6 440 aa16.52■□□□□ 0.24
PTCD2-209ENST00000511752 MTFR1LQ9H019 292 aa16.52■□□□□ 0.24
PTCD2-209ENST00000511752 COL5A3P25940 1745 aaPredicted RBP16.52■□□□□ 0.24
PTCD2-209ENST00000511752 UBR3Q6ZT12 1888 aa16.52■□□□□ 0.23
PTCD2-209ENST00000511752 CICQ96RK0 1608 aaPredicted RBP16.52■□□□□ 0.23
PTCD2-209ENST00000511752 SLC39A6Q13433 755 aa16.51■□□□□ 0.23
PTCD2-209ENST00000511752 NFE2L2Q16236 605 aa16.51■□□□□ 0.23
PTCD2-209ENST00000511752 SLC4A9Q96Q91 983 aa16.51■□□□□ 0.23
PTCD2-209ENST00000511752 UBR2Q8IWV8 1755 aa16.51■□□□□ 0.23
PTCD2-209ENST00000511752 TJP1Q07157 1748 aa16.5■□□□□ 0.23
PTCD2-209ENST00000511752 MCM10Q7L590 875 aa16.5■□□□□ 0.23
PTCD2-209ENST00000511752 PPP1R1BQ9UD71 204 aaPredicted RBP16.5■□□□□ 0.23
PTCD2-209ENST00000511752 ATF5Q9Y2D1 282 aaPredicted RBP16.5■□□□□ 0.23
PTCD2-209ENST00000511752 GNPATO15228 680 aa16.49■□□□□ 0.23
PTCD2-209ENST00000511752 RC3H1Q5TC82 1133 aaKnown RBP16.49■□□□□ 0.23
PTCD2-209ENST00000511752 COL23A1Q86Y22 540 aaPredicted RBP16.49■□□□□ 0.23
PTCD2-209ENST00000511752 KCPQ6ZWJ8 1503 aa16.49■□□□□ 0.23
PTCD2-209ENST00000511752 CNTNAP4Q9C0A0 1308 aa16.48■□□□□ 0.23
PTCD2-209ENST00000511752 BTBD11A6QL63 1104 aa16.48■□□□□ 0.23
PTCD2-209ENST00000511752 SSFA2P28290 1259 aa16.48■□□□□ 0.23
PTCD2-209ENST00000511752 DCTN1Q14203 1278 aa16.48■□□□□ 0.23
PTCD2-209ENST00000511752 ZNF790Q6PG37 636 aa16.48■□□□□ 0.23
PTCD2-209ENST00000511752 RUNDC1Q96C34 613 aa16.48■□□□□ 0.23
PTCD2-209ENST00000511752 ADAMTS8Q9UP79 889 aa16.48■□□□□ 0.23
PTCD2-209ENST00000511752 PHF14O94880 888 aa16.47■□□□□ 0.23
PTCD2-209ENST00000511752 MAPK8IP2Q13387 824 aaPredicted RBP16.47■□□□□ 0.23
PTCD2-209ENST00000511752 VSIG10Q8N0Z9 540 aa16.47■□□□□ 0.23
PTCD2-209ENST00000511752 RTCBQ9Y3I0 505 aaKnown RBP16.47■□□□□ 0.23
PTCD2-209ENST00000511752 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.46■□□□□ 0.23
PTCD2-209ENST00000511752 CCDC146Q8IYE0 955 aa16.46■□□□□ 0.23
PTCD2-209ENST00000511752 COL24A1Q17RW2 1714 aa16.45■□□□□ 0.22
PTCD2-209ENST00000511752 TMPOP42166 694 aaKnown RBP16.45■□□□□ 0.22
PTCD2-209ENST00000511752 PTGER2P43116 358 aa16.45■□□□□ 0.22
PTCD2-209ENST00000511752 CRKLP46109 303 aaKnown RBP16.45■□□□□ 0.22
PTCD2-209ENST00000511752 RIPK4P57078 832 aa16.45■□□□□ 0.22
PTCD2-209ENST00000511752 LMOD3Q0VAK6 560 aa16.45■□□□□ 0.22
PTCD2-209ENST00000511752 TAF7Q15545 349 aaPredicted RBP16.45■□□□□ 0.22
PTCD2-209ENST00000511752 DNAJC10Q8IXB1 793 aa16.45■□□□□ 0.22
PTCD2-209ENST00000511752 MYH14Q7Z406 1995 aaKnown RBP16.45■□□□□ 0.22
PTCD2-209ENST00000511752 HEG1Q9ULI3 1381 aa16.44■□□□□ 0.22
PTCD2-209ENST00000511752 RPS6KA4O75676 772 aa16.44■□□□□ 0.22
PTCD2-209ENST00000511752 POLD1P28340 1107 aa16.44■□□□□ 0.22
PTCD2-209ENST00000511752 ZNF496Q96IT1 587 aaPredicted RBP16.44■□□□□ 0.22
PTCD2-209ENST00000511752 FMNL2Q96PY5 1086 aa16.44■□□□□ 0.22
PTCD2-209ENST00000511752 TRAPPC3LQ5T215 181 aa16.43■□□□□ 0.22
PTCD2-209ENST00000511752 AMIGO3Q86WK7 504 aa16.43■□□□□ 0.22
PTCD2-209ENST00000511752 PNISRQ8TF01 805 aaKnown RBP16.43■□□□□ 0.22
PTCD2-209ENST00000511752 SGIP1Q9BQI5 828 aa16.43■□□□□ 0.22
PTCD2-209ENST00000511752 TEX13AQ9BXU3 409 aaPredicted RBP16.43■□□□□ 0.22
PTCD2-209ENST00000511752 CCDC87Q9NVE4 849 aa16.43■□□□□ 0.22
PTCD2-209ENST00000511752 CYP19A1P11511 503 aaPredicted RBP16.42■□□□□ 0.22
PTCD2-209ENST00000511752 NEUROD2Q15784 382 aa16.42■□□□□ 0.22
PTCD2-209ENST00000511752 SMIM5Q71RC9 77 aa16.42■□□□□ 0.22
PTCD2-209ENST00000511752 MRS2Q9HD23 443 aa16.42■□□□□ 0.22
PTCD2-209ENST00000511752 KCNQ3O43525 872 aa16.41■□□□□ 0.22
PTCD2-209ENST00000511752 STARD3NLO95772 234 aa16.41■□□□□ 0.22
PTCD2-209ENST00000511752 CCDC184Q52MB2 194 aa16.41■□□□□ 0.22
PTCD2-209ENST00000511752 MSL1Q68DK7 614 aa16.41■□□□□ 0.22
PTCD2-209ENST00000511752 THUMPD2Q9BTF0 503 aaKnown RBP16.41■□□□□ 0.22
PTCD2-209ENST00000511752 RRP7AQ9Y3A4 280 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms