RNA–Protein interactions for RNA: ENST00000511241.5

LINC01088-207, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 679 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-207ENST00000511241 USP17L11C9JVI0 530 aa12.56□□□□□ -0.4
LINC01088-207ENST00000511241 USP17L21D6R901 530 aa12.56□□□□□ -0.4
LINC01088-207ENST00000511241 USP17L18D6R9N7 530 aa12.56□□□□□ -0.4
LINC01088-207ENST00000511241 USP17L22D6RA61 530 aa12.56□□□□□ -0.4
LINC01088-207ENST00000511241 USP17L17D6RBQ6 530 aa12.56□□□□□ -0.4
LINC01088-207ENST00000511241 USP17L19D6RCP7 530 aa12.56□□□□□ -0.4
LINC01088-207ENST00000511241 USP17L20D6RJB6 530 aa12.56□□□□□ -0.4
LINC01088-207ENST00000511241 SMPD1P17405 629 aa12.56□□□□□ -0.4
LINC01088-207ENST00000511241 USP17L24Q0WX57 530 aa12.56□□□□□ -0.4
LINC01088-207ENST00000511241 PCDHGA11Q9Y5H2 935 aa12.56□□□□□ -0.4
LINC01088-207ENST00000511241 LILRA1O75019 489 aa12.55□□□□□ -0.4
LINC01088-207ENST00000511241 SCTRP47872 440 aa12.55□□□□□ -0.4
LINC01088-207ENST00000511241 CLDN10P78369 228 aa12.55□□□□□ -0.4
LINC01088-207ENST00000511241 CRTC2Q53ET0 693 aaPredicted RBP12.55□□□□□ -0.4
LINC01088-207ENST00000511241 RETREG2Q8NC44 543 aa12.55□□□□□ -0.4
LINC01088-207ENST00000511241 CYLDQ9NQC7 956 aa12.55□□□□□ -0.4
LINC01088-207ENST00000511241 USTQ9Y2C2 406 aa12.55□□□□□ -0.4
LINC01088-207ENST00000511241 ZBTB7BO15156 539 aaPredicted RBP12.54□□□□□ -0.4
LINC01088-207ENST00000511241 TTBK1Q5TCY1 1321 aaPredicted RBP12.54□□□□□ -0.4
LINC01088-207ENST00000511241 CARMIL1Q5VZK9 1371 aa12.54□□□□□ -0.4
LINC01088-207ENST00000511241 KIAA0586Q9BVV6 1533 aa12.53□□□□□ -0.4
LINC01088-207ENST00000511241 ANKMY2Q8IV38 441 aa12.53□□□□□ -0.4
LINC01088-207ENST00000511241 SIX5Q8N196 739 aa12.53□□□□□ -0.4
LINC01088-207ENST00000511241 KLF16Q9BXK1 252 aaPredicted RBP12.53□□□□□ -0.4
LINC01088-207ENST00000511241 OSBPL3Q9H4L5 887 aa12.53□□□□□ -0.4
LINC01088-207ENST00000511241 NOVA2Q9UNW9 492 aaKnown RBP12.53□□□□□ -0.4
LINC01088-207ENST00000511241 PDZRN3Q9UPQ7 1066 aa12.53□□□□□ -0.4
LINC01088-207ENST00000511241 RBM19Q9Y4C8 960 aaKnown RBP12.53□□□□□ -0.4
LINC01088-207ENST00000511241 CYP2U1Q7Z449 544 aa12.52□□□□□ -0.41
LINC01088-207ENST00000511241 PDIA4P13667 645 aaKnown RBP12.51□□□□□ -0.41
LINC01088-207ENST00000511241 PSME1Q06323 249 aa12.51□□□□□ -0.41
LINC01088-207ENST00000511241 FAM200AQ8TCP9 573 aa12.51□□□□□ -0.41
LINC01088-207ENST00000511241 ZIC2O95409 532 aaPredicted RBP12.5□□□□□ -0.41
LINC01088-207ENST00000511241 WDR4P57081 412 aaKnown RBP12.5□□□□□ -0.41
LINC01088-207ENST00000511241 CCDC102BQ68D86 513 aa12.5□□□□□ -0.41
LINC01088-207ENST00000511241 ZNF594Q96JF6 807 aaPredicted RBP12.5□□□□□ -0.41
LINC01088-207ENST00000511241 ZMIZ1Q9ULJ6 1067 aa12.5□□□□□ -0.41
LINC01088-207ENST00000511241 CUL7Q14999 1698 aa12.5□□□□□ -0.41
LINC01088-207ENST00000511241 ADD1P35611 737 aaKnown RBP12.49□□□□□ -0.41
LINC01088-207ENST00000511241 DPYDQ12882 1025 aa12.49□□□□□ -0.41
LINC01088-207ENST00000511241 ITPKCQ96DU7 683 aa12.49□□□□□ -0.41
LINC01088-207ENST00000511241 TRAIPQ9BWF2 469 aa12.49□□□□□ -0.41
LINC01088-207ENST00000511241 ADCY10Q96PN6 1610 aa12.48□□□□□ -0.41
LINC01088-207ENST00000511241 DKK1O94907 266 aa12.48□□□□□ -0.41
LINC01088-207ENST00000511241 GNRH1P01148 92 aa12.48□□□□□ -0.41
LINC01088-207ENST00000511241 TIMP2P16035 220 aa12.48□□□□□ -0.41
LINC01088-207ENST00000511241 Q6ZVU0 165 aa12.48□□□□□ -0.41
LINC01088-207ENST00000511241 KIAA1024Q9UPX6 916 aa12.48□□□□□ -0.41
LINC01088-207ENST00000511241 TPCN2Q8NHX9 752 aa12.47□□□□□ -0.41
LINC01088-207ENST00000511241 HPS1Q92902 700 aa12.47□□□□□ -0.41
LINC01088-207ENST00000511241 WASLO00401 505 aaPredicted RBP12.46□□□□□ -0.41
LINC01088-207ENST00000511241 ADH1AP07327 375 aa12.46□□□□□ -0.41
LINC01088-207ENST00000511241 SEC13P55735 322 aa12.46□□□□□ -0.41
LINC01088-207ENST00000511241 FAM69CQ0P6D2 419 aa12.46□□□□□ -0.41
LINC01088-207ENST00000511241 TMEM88BA6NKF7 163 aa12.45□□□□□ -0.42
LINC01088-207ENST00000511241 M0R2N6 131 aa12.45□□□□□ -0.42
LINC01088-207ENST00000511241 ESCO1Q5FWF5 840 aa12.45□□□□□ -0.42
LINC01088-207ENST00000511241 TMEM164Q5U3C3 297 aa12.45□□□□□ -0.42
LINC01088-207ENST00000511241 STK32AQ8WU08 396 aa12.45□□□□□ -0.42
LINC01088-207ENST00000511241 ZFAND3Q9H8U3 227 aa12.45□□□□□ -0.42
LINC01088-207ENST00000511241 PTPRGP23470 1445 aa12.45□□□□□ -0.42
LINC01088-207ENST00000511241 KIF13AQ9H1H9 1805 aa12.44□□□□□ -0.42
LINC01088-207ENST00000511241 CBLBQ13191 982 aa12.43□□□□□ -0.42
LINC01088-207ENST00000511241 SWI5Q1ZZU3 235 aa12.43□□□□□ -0.42
LINC01088-207ENST00000511241 ABCC10Q5T3U5 1492 aa12.42□□□□□ -0.42
LINC01088-207ENST00000511241 FAM187AA6NFU0 413 aa12.42□□□□□ -0.42
LINC01088-207ENST00000511241 BACH1O14867 736 aa12.42□□□□□ -0.42
LINC01088-207ENST00000511241 AVPP01185 164 aa12.42□□□□□ -0.42
LINC01088-207ENST00000511241 GDF10P55107 478 aa12.42□□□□□ -0.42
LINC01088-207ENST00000511241 TMEM229AB2RXF0 380 aa12.41□□□□□ -0.42
LINC01088-207ENST00000511241 NRG2O14511 850 aaPredicted RBP12.41□□□□□ -0.42
LINC01088-207ENST00000511241 GFRA3O60609 400 aa12.41□□□□□ -0.42
LINC01088-207ENST00000511241 INHAP05111 366 aa12.41□□□□□ -0.42
LINC01088-207ENST00000511241 PTGIRP43119 386 aa12.41□□□□□ -0.42
LINC01088-207ENST00000511241 SCNN1DP51172 638 aa12.41□□□□□ -0.42
LINC01088-207ENST00000511241 LAPTM4AQ15012 233 aa12.41□□□□□ -0.42
LINC01088-207ENST00000511241 MAPKBP1O60336 1514 aa12.41□□□□□ -0.42
LINC01088-207ENST00000511241 TNIKQ9UKE5 1360 aa12.41□□□□□ -0.42
LINC01088-207ENST00000511241 IQGAP2Q13576 1575 aa12.4□□□□□ -0.42
LINC01088-207ENST00000511241 SFI1A8K8P3 1242 aa12.4□□□□□ -0.42
LINC01088-207ENST00000511241 CAPN5O15484 640 aaPredicted RBP12.4□□□□□ -0.42
LINC01088-207ENST00000511241 DGAT1O75907 488 aa12.4□□□□□ -0.42
LINC01088-207ENST00000511241 MEIOBQ8N635 442 aa12.4□□□□□ -0.42
LINC01088-207ENST00000511241 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.4□□□□□ -0.42
LINC01088-207ENST00000511241 ETNK1Q9HBU6 452 aa12.4□□□□□ -0.42
LINC01088-207ENST00000511241 ZNF358Q9NW07 568 aa12.4□□□□□ -0.42
LINC01088-207ENST00000511241 DISP1Q96F81 1524 aa12.4□□□□□ -0.42
LINC01088-207ENST00000511241 RAPGEF2Q9Y4G8 1499 aa12.4□□□□□ -0.43
LINC01088-207ENST00000511241 DIP2BQ9P265 1576 aa12.39□□□□□ -0.43
LINC01088-207ENST00000511241 KDF1Q8NAX2 398 aaPredicted RBP12.39□□□□□ -0.43
LINC01088-207ENST00000511241 CLP1Q92989 425 aaKnown RBP12.39□□□□□ -0.43
LINC01088-207ENST00000511241 XAGE2Q96GT9 111 aa12.39□□□□□ -0.43
LINC01088-207ENST00000511241 CARMIL2Q6F5E8 1435 aa12.38□□□□□ -0.43
LINC01088-207ENST00000511241 SLC4A9Q96Q91 983 aa12.38□□□□□ -0.43
LINC01088-207ENST00000511241 TSEN34Q9BSV6 310 aaKnown RBP12.38□□□□□ -0.43
LINC01088-207ENST00000511241 ARHGEF10LQ9HCE6 1279 aa12.38□□□□□ -0.43
LINC01088-207ENST00000511241 A0A1W2PRU2 124 aa12.37□□□□□ -0.43
LINC01088-207ENST00000511241 CTC1Q2NKJ3 1217 aa12.37□□□□□ -0.43
LINC01088-207ENST00000511241 PKDCCQ504Y2 493 aa12.37□□□□□ -0.43
LINC01088-207ENST00000511241 B4GALNT3Q6L9W6 998 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms