RNA–Protein interactions for RNA: ENST00000509377.1

FAM47E-STBD1-201, Transcript of FAM47E-STBD1 readthrough, humanhuman

TSL 2

Gene FAM47E-STBD1, Length 1,484 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM47E-STBD1-201ENST00000509377 SALL2Q9Y467 1007 aaPredicted RBP29.25■■■□□ 2.27
FAM47E-STBD1-201ENST00000509377 NCBP3Q53F19 620 aaKnown RBP29.24■■■□□ 2.27
FAM47E-STBD1-201ENST00000509377 PIGBQ92521 554 aa29.24■■■□□ 2.27
FAM47E-STBD1-201ENST00000509377 TNS1Q9HBL0 1735 aaKnown RBP29.23■■■□□ 2.27
FAM47E-STBD1-201ENST00000509377 BTAF1O14981 1849 aa29.23■■■□□ 2.27
FAM47E-STBD1-201ENST00000509377 CCDC27Q2M243 656 aa29.22■■■□□ 2.27
FAM47E-STBD1-201ENST00000509377 NGEFQ8N5V2 710 aa29.22■■■□□ 2.27
FAM47E-STBD1-201ENST00000509377 SIPA1L3O60292 1781 aaPredicted RBP29.21■■■□□ 2.27
FAM47E-STBD1-201ENST00000509377 SF3B2Q13435 895 aaKnown RBP29.19■■■□□ 2.26
FAM47E-STBD1-201ENST00000509377 CCDC125Q86Z20 511 aa29.19■■■□□ 2.26
FAM47E-STBD1-201ENST00000509377 APBA3O96018 575 aa29.18■■■□□ 2.26
FAM47E-STBD1-201ENST00000509377 WWC1Q8IX03 1113 aa29.18■■■□□ 2.26
FAM47E-STBD1-201ENST00000509377 UPF1Q92900 1129 aaKnown RBP eCLIP29.18■■■□□ 2.26
FAM47E-STBD1-201ENST00000509377 TAF7Q15545 349 aaPredicted RBP29.17■■■□□ 2.26
FAM47E-STBD1-201ENST00000509377 ASAP1Q9ULH1 1129 aa29.15■■■□□ 2.26
FAM47E-STBD1-201ENST00000509377 BTBD11A6QL63 1104 aa29.14■■■□□ 2.26
FAM47E-STBD1-201ENST00000509377 CALD1Q05682 793 aaKnown RBP29.14■■■□□ 2.26
FAM47E-STBD1-201ENST00000509377 ATG3Q9NT62 314 aa29.14■■■□□ 2.26
FAM47E-STBD1-201ENST00000509377 SMARCC1Q92922 1105 aaPredicted RBP29.13■■■□□ 2.25
FAM47E-STBD1-201ENST00000509377 ZNF521Q96K83 1311 aa29.13■■■□□ 2.25
FAM47E-STBD1-201ENST00000509377 SLC39A6Q13433 755 aa29.12■■■□□ 2.25
FAM47E-STBD1-201ENST00000509377 PAPPAQ13219 1627 aa29.12■■■□□ 2.25
FAM47E-STBD1-201ENST00000509377 BAG6P46379 1132 aa29.1■■■□□ 2.25
FAM47E-STBD1-201ENST00000509377 MIS18AQ9NYP9 233 aa29.1■■■□□ 2.25
FAM47E-STBD1-201ENST00000509377 LAS1LQ9Y4W2 734 aaKnown RBP29.1■■■□□ 2.25
FAM47E-STBD1-201ENST00000509377 PALLDQ8WX93 1383 aa29.1■■■□□ 2.25
FAM47E-STBD1-201ENST00000509377 PLSCR1O15162 318 aa29.1■■■□□ 2.25
FAM47E-STBD1-201ENST00000509377 ZNF790Q6PG37 636 aa29.09■■■□□ 2.25
FAM47E-STBD1-201ENST00000509377 WDR63Q8IWG1 891 aa29.09■■■□□ 2.25
FAM47E-STBD1-201ENST00000509377 TTC5Q8N0Z6 440 aa29.09■■■□□ 2.25
FAM47E-STBD1-201ENST00000509377 KDM3BQ7LBC6 1761 aa29.07■■■□□ 2.24
FAM47E-STBD1-201ENST00000509377 EN1Q05925 392 aaPredicted RBP29.07■■■□□ 2.24
FAM47E-STBD1-201ENST00000509377 DEFB132Q7Z7B7 95 aa29.07■■■□□ 2.24
FAM47E-STBD1-201ENST00000509377 CFAP44Q96MT7 982 aa29.07■■■□□ 2.24
FAM47E-STBD1-201ENST00000509377 IFT57Q9NWB7 429 aa29.07■■■□□ 2.24
FAM47E-STBD1-201ENST00000509377 BABAM1Q9NWV8 329 aa29.07■■■□□ 2.24
FAM47E-STBD1-201ENST00000509377 TSPYL4Q9UJ04 414 aa29.07■■■□□ 2.24
FAM47E-STBD1-201ENST00000509377 RGPD3A6NKT7 1758 aaPredicted RBP29.06■■■□□ 2.24
FAM47E-STBD1-201ENST00000509377 RGPD4Q7Z3J3 1758 aa29.06■■■□□ 2.24
FAM47E-STBD1-201ENST00000509377 LY75O60449 1722 aa29.06■■■□□ 2.24
FAM47E-STBD1-201ENST00000509377 IL16Q14005 1332 aa29.06■■■□□ 2.24
FAM47E-STBD1-201ENST00000509377 CHL1O00533 1208 aa29.05■■■□□ 2.24
FAM47E-STBD1-201ENST00000509377 KCNQ3O43525 872 aa29.05■■■□□ 2.24
FAM47E-STBD1-201ENST00000509377 GNAI1P63096 354 aa29.05■■■□□ 2.24
FAM47E-STBD1-201ENST00000509377 PTCD1O75127 700 aaKnown RBP29.04■■■□□ 2.24
FAM47E-STBD1-201ENST00000509377 ZNF853P0CG23 659 aa29.04■■■□□ 2.24
FAM47E-STBD1-201ENST00000509377 RBM42Q9BTD8 480 aaKnown RBP29.04■■■□□ 2.24
FAM47E-STBD1-201ENST00000509377 UBR2Q8IWV8 1755 aa29.04■■■□□ 2.24
FAM47E-STBD1-201ENST00000509377 CAMKK2Q96RR4 588 aa29.04■■■□□ 2.24
FAM47E-STBD1-201ENST00000509377 KCPQ6ZWJ8 1503 aa29.03■■■□□ 2.24
FAM47E-STBD1-201ENST00000509377 EZH2Q15910 746 aaKnown RBP29.03■■■□□ 2.24
FAM47E-STBD1-201ENST00000509377 LOC102724428A0A0B4J2F2 783 aa29.01■■■□□ 2.23
FAM47E-STBD1-201ENST00000509377 SIK1P57059 783 aa29.01■■■□□ 2.23
FAM47E-STBD1-201ENST00000509377 TXNRD1Q16881 649 aa29.01■■■□□ 2.23
FAM47E-STBD1-201ENST00000509377 MBIPQ9NS73 344 aa29.01■■■□□ 2.23
FAM47E-STBD1-201ENST00000509377 GOLGA2Q08379 1002 aa29■■■□□ 2.23
FAM47E-STBD1-201ENST00000509377 ZNF496Q96IT1 587 aaPredicted RBP29■■■□□ 2.23
FAM47E-STBD1-201ENST00000509377 FMNL2Q96PY5 1086 aa29■■■□□ 2.23
FAM47E-STBD1-201ENST00000509377 CCNL1Q9UK58 526 aaPredicted RBP29■■■□□ 2.23
FAM47E-STBD1-201ENST00000509377 PROM2Q8N271 834 aa28.99■■■□□ 2.23
FAM47E-STBD1-201ENST00000509377 SLC27A3Q5K4L6 730 aa28.98■■■□□ 2.23
FAM47E-STBD1-201ENST00000509377 ATP6V1AP38606 617 aa28.97■■■□□ 2.23
FAM47E-STBD1-201ENST00000509377 EIF4A1P60842 406 aaKnown RBP28.97■■■□□ 2.23
FAM47E-STBD1-201ENST00000509377 SLC4A9Q96Q91 983 aa28.97■■■□□ 2.23
FAM47E-STBD1-201ENST00000509377 SPINK5Q9NQ38 1064 aaPredicted RBP28.97■■■□□ 2.23
FAM47E-STBD1-201ENST00000509377 KCNQ4P56696 695 aa28.97■■■□□ 2.23
FAM47E-STBD1-201ENST00000509377 TSR2Q969E8 191 aaKnown RBP28.97■■■□□ 2.23
FAM47E-STBD1-201ENST00000509377 ZNF831Q5JPB2 1677 aa28.96■■■□□ 2.23
FAM47E-STBD1-201ENST00000509377 HEG1Q9ULI3 1381 aa28.96■■■□□ 2.23
FAM47E-STBD1-201ENST00000509377 RREB1Q92766 1687 aa28.96■■■□□ 2.23
FAM47E-STBD1-201ENST00000509377 LRRC4BQ9NT99 713 aa28.96■■■□□ 2.23
FAM47E-STBD1-201ENST00000509377 VSIG10Q8N0Z9 540 aa28.95■■■□□ 2.22
FAM47E-STBD1-201ENST00000509377 CDCA7LQ96GN5 454 aa28.94■■■□□ 2.22
FAM47E-STBD1-201ENST00000509377 MYH16Q9H6N6 1097 aa28.94■■■□□ 2.22
FAM47E-STBD1-201ENST00000509377 E9PSI1 815 aa28.93■■■□□ 2.22
FAM47E-STBD1-201ENST00000509377 FANCIQ9NVI1 1328 aa28.93■■■□□ 2.22
FAM47E-STBD1-201ENST00000509377 TJP1Q07157 1748 aa28.92■■■□□ 2.22
FAM47E-STBD1-201ENST00000509377 ITPK1Q13572 414 aa28.92■■■□□ 2.22
FAM47E-STBD1-201ENST00000509377 CICQ96RK0 1608 aaPredicted RBP28.92■■■□□ 2.22
FAM47E-STBD1-201ENST00000509377 SLFN5Q08AF3 891 aa28.91■■■□□ 2.22
FAM47E-STBD1-201ENST00000509377 TRMT2AQ8IZ69 625 aaKnown RBP28.91■■■□□ 2.22
FAM47E-STBD1-201ENST00000509377 SNRPA1P09661 255 aaKnown RBP28.91■■■□□ 2.22
FAM47E-STBD1-201ENST00000509377 DNAJC10Q8IXB1 793 aa28.91■■■□□ 2.22
FAM47E-STBD1-201ENST00000509377 C5P01031 1676 aa28.91■■■□□ 2.22
FAM47E-STBD1-201ENST00000509377 TAF1LQ8IZX4 1826 aa28.9■■■□□ 2.22
FAM47E-STBD1-201ENST00000509377 NUP188Q5SRE5 1749 aa28.9■■■□□ 2.22
FAM47E-STBD1-201ENST00000509377 GIGYF1O75420 1035 aaPredicted RBP28.89■■■□□ 2.22
FAM47E-STBD1-201ENST00000509377 KRT24Q2M2I5 525 aa28.89■■■□□ 2.22
FAM47E-STBD1-201ENST00000509377 TEX13AQ9BXU3 409 aaPredicted RBP28.89■■■□□ 2.22
FAM47E-STBD1-201ENST00000509377 PRAMEF22A3QJZ6 481 aa28.88■■■□□ 2.21
FAM47E-STBD1-201ENST00000509377 HMGB2P26583 209 aaKnown RBP28.88■■■□□ 2.21
FAM47E-STBD1-201ENST00000509377 LINC00116Q8NCU8 138 aa28.88■■■□□ 2.21
FAM47E-STBD1-201ENST00000509377 COL5A3P25940 1745 aaPredicted RBP28.87■■■□□ 2.21
FAM47E-STBD1-201ENST00000509377 DUSP27Q5VZP5 1158 aa28.86■■■□□ 2.21
FAM47E-STBD1-201ENST00000509377 C8orf58Q8NAV2 365 aa28.85■■■□□ 2.21
FAM47E-STBD1-201ENST00000509377 USP16Q9Y5T5 823 aa28.85■■■□□ 2.21
FAM47E-STBD1-201ENST00000509377 LAMB4A4D0S4 1761 aa28.84■■■□□ 2.21
FAM47E-STBD1-201ENST00000509377 C4BP0C0L5 1744 aa28.84■■■□□ 2.21
FAM47E-STBD1-201ENST00000509377 STARD3NLO95772 234 aa28.84■■■□□ 2.21
FAM47E-STBD1-201ENST00000509377 CYP19A1P11511 503 aaPredicted RBP28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms