RNA–Protein interactions for RNA: ENST00000509234.1

TRAPPC13-210, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-210ENST00000509234 TIMP2P16035 220 aa7.9□□□□□ -1.14
TRAPPC13-210ENST00000509234 EPHA4P54764 986 aa7.9□□□□□ -1.14
TRAPPC13-210ENST00000509234 OCLNQ16625 522 aa7.9□□□□□ -1.14
TRAPPC13-210ENST00000509234 TRIM52Q96A61 297 aa7.9□□□□□ -1.14
TRAPPC13-210ENST00000509234 PGPEP1Q9NXJ5 209 aa7.9□□□□□ -1.14
TRAPPC13-210ENST00000509234 SFI1A8K8P3 1242 aa7.89□□□□□ -1.15
TRAPPC13-210ENST00000509234 GNRH1P01148 92 aa7.89□□□□□ -1.15
TRAPPC13-210ENST00000509234 KCNA1Q09470 495 aa7.89□□□□□ -1.15
TRAPPC13-210ENST00000509234 CYP2U1Q7Z449 544 aa7.89□□□□□ -1.15
TRAPPC13-210ENST00000509234 C1orf216Q8TAB5 229 aa7.89□□□□□ -1.15
TRAPPC13-210ENST00000509234 ITPKCQ96DU7 683 aa7.89□□□□□ -1.15
TRAPPC13-210ENST00000509234 SLC4A9Q96Q91 983 aa7.89□□□□□ -1.15
TRAPPC13-210ENST00000509234 ETNK1Q9HBU6 452 aa7.89□□□□□ -1.15
TRAPPC13-210ENST00000509234 ZNF358Q9NW07 568 aa7.89□□□□□ -1.15
TRAPPC13-210ENST00000509234 AXIN1O15169 862 aa7.88□□□□□ -1.15
TRAPPC13-210ENST00000509234 STAU1O95793 577 aaKnown RBP7.88□□□□□ -1.15
TRAPPC13-210ENST00000509234 INHAP05111 366 aa7.88□□□□□ -1.15
TRAPPC13-210ENST00000509234 ADH1AP07327 375 aa7.88□□□□□ -1.15
TRAPPC13-210ENST00000509234 TXNDC2Q86VQ3 553 aa7.88□□□□□ -1.15
TRAPPC13-210ENST00000509234 CYP4X1Q8N118 509 aa7.88□□□□□ -1.15
TRAPPC13-210ENST00000509234 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.88□□□□□ -1.15
TRAPPC13-210ENST00000509234 GNEQ9Y223 722 aaKnown RBP7.88□□□□□ -1.15
TRAPPC13-210ENST00000509234 WASF2Q9Y6W5 498 aa7.88□□□□□ -1.15
TRAPPC13-210ENST00000509234 WEE1P30291 646 aa7.87□□□□□ -1.15
TRAPPC13-210ENST00000509234 GDF10P55107 478 aa7.87□□□□□ -1.15
TRAPPC13-210ENST00000509234 MTFR1Q15390 333 aa7.87□□□□□ -1.15
TRAPPC13-210ENST00000509234 CRIPAKQ8N1N5 446 aa7.87□□□□□ -1.15
TRAPPC13-210ENST00000509234 TTC24A2A3L6 582 aaPredicted RBP7.86□□□□□ -1.15
TRAPPC13-210ENST00000509234 FOXK2Q01167 660 aa7.86□□□□□ -1.15
TRAPPC13-210ENST00000509234 CBLBQ13191 982 aa7.86□□□□□ -1.15
TRAPPC13-210ENST00000509234 POTEAQ6S8J7 498 aa7.86□□□□□ -1.15
TRAPPC13-210ENST00000509234 TAS1R3Q7RTX0 852 aa7.86□□□□□ -1.15
TRAPPC13-210ENST00000509234 XAGE2Q96GT9 111 aa7.86□□□□□ -1.15
TRAPPC13-210ENST00000509234 ZFAND3Q9H8U3 227 aa7.86□□□□□ -1.15
TRAPPC13-210ENST00000509234 FAM181BA6NEQ2 426 aa7.85□□□□□ -1.15
TRAPPC13-210ENST00000509234 ZIC2O95409 532 aaPredicted RBP7.85□□□□□ -1.15
TRAPPC13-210ENST00000509234 IL2RAP01589 272 aa7.85□□□□□ -1.15
TRAPPC13-210ENST00000509234 WDR4P57081 412 aaKnown RBP7.85□□□□□ -1.15
TRAPPC13-210ENST00000509234 PSME1Q06323 249 aa7.85□□□□□ -1.15
TRAPPC13-210ENST00000509234 ZNF295-AS1Q8N0V1 137 aa7.85□□□□□ -1.15
TRAPPC13-210ENST00000509234 MEIOBQ8N635 442 aa7.85□□□□□ -1.15
TRAPPC13-210ENST00000509234 TSEN2Q8NCE0 465 aaKnown RBP7.85□□□□□ -1.15
TRAPPC13-210ENST00000509234 HPS1Q92902 700 aa7.85□□□□□ -1.15
TRAPPC13-210ENST00000509234 CXXC1Q9P0U4 656 aaPredicted RBP7.85□□□□□ -1.15
TRAPPC13-210ENST00000509234 NCAPD3P42695 1498 aa7.85□□□□□ -1.15
TRAPPC13-210ENST00000509234 PATL2C9JE40 543 aaKnown RBP7.84□□□□□ -1.15
TRAPPC13-210ENST00000509234 AVPP01185 164 aa7.84□□□□□ -1.15
TRAPPC13-210ENST00000509234 B4GALNT3Q6L9W6 998 aa7.84□□□□□ -1.15
TRAPPC13-210ENST00000509234 FHDC1Q9C0D6 1143 aaPredicted RBP7.84□□□□□ -1.15
TRAPPC13-210ENST00000509234 TERTO14746 1132 aaKnown RBP7.83□□□□□ -1.16
TRAPPC13-210ENST00000509234 C21orf2O43822 256 aa7.83□□□□□ -1.16
TRAPPC13-210ENST00000509234 ATP2B4P23634 1241 aa7.83□□□□□ -1.16
TRAPPC13-210ENST00000509234 PTGIRP43119 386 aa7.83□□□□□ -1.16
TRAPPC13-210ENST00000509234 CLN3Q13286 438 aa7.83□□□□□ -1.16
TRAPPC13-210ENST00000509234 AEBP1Q8IUX7 1158 aa7.83□□□□□ -1.16
TRAPPC13-210ENST00000509234 ESYT1Q9BSJ8 1104 aa7.83□□□□□ -1.16
TRAPPC13-210ENST00000509234 ARHGEF10LQ9HCE6 1279 aa7.83□□□□□ -1.16
TRAPPC13-210ENST00000509234 IQSEC3Q9UPP2 1182 aaPredicted RBP7.83□□□□□ -1.16
TRAPPC13-210ENST00000509234 BACH1O14867 736 aa7.82□□□□□ -1.16
TRAPPC13-210ENST00000509234 IGFBP4P22692 258 aa7.82□□□□□ -1.16
TRAPPC13-210ENST00000509234 SUZ12Q15022 739 aaKnown RBP7.82□□□□□ -1.16
TRAPPC13-210ENST00000509234 ESCO1Q5FWF5 840 aa7.82□□□□□ -1.16
TRAPPC13-210ENST00000509234 A0A1W2PRU2 124 aa7.81□□□□□ -1.16
TRAPPC13-210ENST00000509234 ZBTB7CA1YPR0 619 aa7.81□□□□□ -1.16
TRAPPC13-210ENST00000509234 SMTNP53814 917 aa7.81□□□□□ -1.16
TRAPPC13-210ENST00000509234 CTC1Q2NKJ3 1217 aa7.81□□□□□ -1.16
TRAPPC13-210ENST00000509234 LCE2CQ5TA81 110 aa7.81□□□□□ -1.16
TRAPPC13-210ENST00000509234 RAB6BQ9NRW1 208 aa7.81□□□□□ -1.16
TRAPPC13-210ENST00000509234 SCHIP1Q9P0W5 487 aaPredicted RBP7.81□□□□□ -1.16
TRAPPC13-210ENST00000509234 RBM19Q9Y4C8 960 aaKnown RBP7.81□□□□□ -1.16
TRAPPC13-210ENST00000509234 USP3Q9Y6I4 520 aa7.81□□□□□ -1.16
TRAPPC13-210ENST00000509234 ATAD2BQ9ULI0 1458 aa7.81□□□□□ -1.16
TRAPPC13-210ENST00000509234 A6NJY4 79 aa7.8□□□□□ -1.16
TRAPPC13-210ENST00000509234 PRMT3O60678 531 aa7.8□□□□□ -1.16
TRAPPC13-210ENST00000509234 TNS4Q8IZW8 715 aa7.8□□□□□ -1.16
TRAPPC13-210ENST00000509234 STAG2Q8N3U4 1231 aa7.8□□□□□ -1.16
TRAPPC13-210ENST00000509234 GAS2L2Q8NHY3 880 aa7.8□□□□□ -1.16
TRAPPC13-210ENST00000509234 CNKSR1Q969H4 720 aa7.8□□□□□ -1.16
TRAPPC13-210ENST00000509234 COL26A1Q96A83 441 aa7.8□□□□□ -1.16
TRAPPC13-210ENST00000509234 PRIMPOLQ96LW4 560 aa7.8□□□□□ -1.16
TRAPPC13-210ENST00000509234 AGBL1Q96MI9 1066 aa7.8□□□□□ -1.16
TRAPPC13-210ENST00000509234 SMARCA4P51532 1647 aa7.8□□□□□ -1.16
TRAPPC13-210ENST00000509234 FOXO3O43524 673 aa7.79□□□□□ -1.16
TRAPPC13-210ENST00000509234 SMCPP49901 116 aaPredicted RBP7.79□□□□□ -1.16
TRAPPC13-210ENST00000509234 FKBP5Q13451 457 aaPredicted RBP7.79□□□□□ -1.16
TRAPPC13-210ENST00000509234 PURBQ96QR8 312 aaKnown RBP7.79□□□□□ -1.16
TRAPPC13-210ENST00000509234 TSPAN10Q9H1Z9 355 aaPredicted RBP7.79□□□□□ -1.16
TRAPPC13-210ENST00000509234 ESF1Q9H501 851 aaKnown RBP7.79□□□□□ -1.16
TRAPPC13-210ENST00000509234 IVNS1ABPQ9Y6Y0 642 aa7.79□□□□□ -1.16
TRAPPC13-210ENST00000509234 CDK2AP1O14519 115 aa7.78□□□□□ -1.16
TRAPPC13-210ENST00000509234 SPINT1O43278 529 aa7.78□□□□□ -1.16
TRAPPC13-210ENST00000509234 SNRPBP14678 240 aaKnown RBP7.78□□□□□ -1.16
TRAPPC13-210ENST00000509234 GPC1P35052 558 aa7.78□□□□□ -1.16
TRAPPC13-210ENST00000509234 SCNN1AP37088 669 aa7.78□□□□□ -1.16
TRAPPC13-210ENST00000509234 SERTAD1Q9UHV2 236 aa7.78□□□□□ -1.16
TRAPPC13-210ENST00000509234 SMARCA2P51531 1590 aa7.77□□□□□ -1.17
TRAPPC13-210ENST00000509234 LGR5O75473 907 aa7.77□□□□□ -1.17
TRAPPC13-210ENST00000509234 ARID4AP29374 1257 aaPredicted RBP7.77□□□□□ -1.17
TRAPPC13-210ENST00000509234 CENPCQ03188 943 aa7.77□□□□□ -1.17
TRAPPC13-210ENST00000509234 PODXL2Q9NZ53 605 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms