RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 AGLP35573 1532 aa8.2□□□□□ -1.1
HMGB1P44-201ENST00000508597 DUOX2Q9NRD8 1548 aa8.2□□□□□ -1.1
HMGB1P44-201ENST00000508597 DIP2CQ9Y2E4 1556 aa8.2□□□□□ -1.1
HMGB1P44-201ENST00000508597 ALDH1A1P00352 501 aa8.2□□□□□ -1.1
HMGB1P44-201ENST00000508597 TRIM26Q12899 539 aaPredicted RBP8.2□□□□□ -1.1
HMGB1P44-201ENST00000508597 C1QTNF2Q9BXJ5 285 aa8.2□□□□□ -1.1
HMGB1P44-201ENST00000508597 GDPD2Q9HCC8 539 aa8.2□□□□□ -1.1
HMGB1P44-201ENST00000508597 YEATS2Q9ULM3 1422 aa8.2□□□□□ -1.1
HMGB1P44-201ENST00000508597 A2MP01023 1474 aa8.19□□□□□ -1.1
HMGB1P44-201ENST00000508597 ABCA6Q8N139 1617 aa8.19□□□□□ -1.1
HMGB1P44-201ENST00000508597 TTC24A2A3L6 582 aaPredicted RBP8.19□□□□□ -1.1
HMGB1P44-201ENST00000508597 FAM187AA6NFU0 413 aa8.19□□□□□ -1.1
HMGB1P44-201ENST00000508597 VARSP26640 1264 aaKnown RBP8.19□□□□□ -1.1
HMGB1P44-201ENST00000508597 IRF5Q13568 498 aa8.19□□□□□ -1.1
HMGB1P44-201ENST00000508597 ERFEQ4G0M1 354 aa8.19□□□□□ -1.1
HMGB1P44-201ENST00000508597 NBPF14Q5TI25 921 aa8.19□□□□□ -1.1
HMGB1P44-201ENST00000508597 BPHLQ86WA6 291 aaPredicted RBP8.19□□□□□ -1.1
HMGB1P44-201ENST00000508597 KIF15Q9NS87 1388 aa8.19□□□□□ -1.1
HMGB1P44-201ENST00000508597 PTPRKQ15262 1439 aa8.19□□□□□ -1.1
HMGB1P44-201ENST00000508597 ERBINQ96RT1 1412 aa8.19□□□□□ -1.1
HMGB1P44-201ENST00000508597 BCORL1Q5H9F3 1711 aa8.18□□□□□ -1.1
HMGB1P44-201ENST00000508597 FBXO45P0C2W1 286 aa8.18□□□□□ -1.1
HMGB1P44-201ENST00000508597 ITGAEP38570 1179 aa8.18□□□□□ -1.1
HMGB1P44-201ENST00000508597 GRM5P41594 1212 aa8.18□□□□□ -1.1
HMGB1P44-201ENST00000508597 ADAM32Q8TC27 787 aa8.18□□□□□ -1.1
HMGB1P44-201ENST00000508597 HPS1Q92902 700 aa8.18□□□□□ -1.1
HMGB1P44-201ENST00000508597 ARHGAP9Q9BRR9 750 aa8.18□□□□□ -1.1
HMGB1P44-201ENST00000508597 CHIC2Q9UKJ5 165 aa8.18□□□□□ -1.1
HMGB1P44-201ENST00000508597 EIF2AK4Q9P2K8 1649 aaKnown RBP8.18□□□□□ -1.1
HMGB1P44-201ENST00000508597 ARID5BQ14865 1188 aa8.17□□□□□ -1.1
HMGB1P44-201ENST00000508597 GPKOWQ92917 476 aaPredicted RBP eCLIP8.17□□□□□ -1.1
HMGB1P44-201ENST00000508597 RRP7BPQ9NSQ0 103 aa8.17□□□□□ -1.1
HMGB1P44-201ENST00000508597 COG6Q9Y2V7 657 aa8.17□□□□□ -1.1
HMGB1P44-201ENST00000508597 NDUFB9Q9Y6M9 179 aa8.17□□□□□ -1.1
HMGB1P44-201ENST00000508597 HFM1A2PYH4 1435 aa8.17□□□□□ -1.1
HMGB1P44-201ENST00000508597 SOCS7O14512 581 aa8.16□□□□□ -1.1
HMGB1P44-201ENST00000508597 Q6ZNB5 142 aa8.16□□□□□ -1.1
HMGB1P44-201ENST00000508597 FAM174AQ8TBP5 190 aa8.16□□□□□ -1.1
HMGB1P44-201ENST00000508597 CDK15Q96Q40 435 aa8.16□□□□□ -1.1
HMGB1P44-201ENST00000508597 FAM135AQ9P2D6 1515 aa8.16□□□□□ -1.1
HMGB1P44-201ENST00000508597 ANKRD50Q9ULJ7 1429 aa8.16□□□□□ -1.1
HMGB1P44-201ENST00000508597 ZC3H4Q9UPT8 1303 aaKnown RBP8.16□□□□□ -1.1
HMGB1P44-201ENST00000508597 ARID4BQ4LE39 1312 aaPredicted RBP8.15□□□□□ -1.1
HMGB1P44-201ENST00000508597 MYT1Q01538 1121 aa8.15□□□□□ -1.1
HMGB1P44-201ENST00000508597 PTK2Q05397 1052 aa8.15□□□□□ -1.1
HMGB1P44-201ENST00000508597 ZBTB33Q86T24 672 aa8.15□□□□□ -1.1
HMGB1P44-201ENST00000508597 DACH1Q9UI36 760 aa8.15□□□□□ -1.1
HMGB1P44-201ENST00000508597 GCC2Q8IWJ2 1684 aa8.14□□□□□ -1.11
HMGB1P44-201ENST00000508597 NAIPQ13075 1403 aa8.14□□□□□ -1.11
HMGB1P44-201ENST00000508597 KIF3BO15066 747 aa8.14□□□□□ -1.11
HMGB1P44-201ENST00000508597 ST8SIA5O15466 376 aa8.14□□□□□ -1.11
HMGB1P44-201ENST00000508597 NR3C2P08235 984 aa8.14□□□□□ -1.11
HMGB1P44-201ENST00000508597 ABL2P42684 1182 aa8.14□□□□□ -1.11
HMGB1P44-201ENST00000508597 LAPTM4AQ15012 233 aa8.14□□□□□ -1.11
HMGB1P44-201ENST00000508597 ZMYND15Q9H091 742 aa8.14□□□□□ -1.11
HMGB1P44-201ENST00000508597 ZBBXA8MT70 800 aa8.13□□□□□ -1.11
HMGB1P44-201ENST00000508597 DGAT1O75907 488 aa8.13□□□□□ -1.11
HMGB1P44-201ENST00000508597 PKDCCQ504Y2 493 aa8.13□□□□□ -1.11
HMGB1P44-201ENST00000508597 TRMT44Q8IYL2 757 aaKnown RBP8.13□□□□□ -1.11
HMGB1P44-201ENST00000508597 MPNDQ8N594 471 aa8.13□□□□□ -1.11
HMGB1P44-201ENST00000508597 CLUAP1Q96AJ1 413 aa8.13□□□□□ -1.11
HMGB1P44-201ENST00000508597 GPSM3Q9Y4H4 160 aa8.13□□□□□ -1.11
HMGB1P44-201ENST00000508597 RNF17Q9BXT8 1623 aaKnown RBP8.13□□□□□ -1.11
HMGB1P44-201ENST00000508597 SETD5Q9C0A6 1442 aa8.12□□□□□ -1.11
HMGB1P44-201ENST00000508597 CNTLNQ9NXG0 1405 aa8.12□□□□□ -1.11
HMGB1P44-201ENST00000508597 KANK1Q14678 1352 aa8.12□□□□□ -1.11
HMGB1P44-201ENST00000508597 ESF1Q9H501 851 aaKnown RBP8.12□□□□□ -1.11
HMGB1P44-201ENST00000508597 DEPDC5O75140 1603 aa8.11□□□□□ -1.11
HMGB1P44-201ENST00000508597 ADH1CP00326 375 aa8.11□□□□□ -1.11
HMGB1P44-201ENST00000508597 AVPP01185 164 aa8.11□□□□□ -1.11
HMGB1P44-201ENST00000508597 VAC14Q08AM6 782 aa8.11□□□□□ -1.11
HMGB1P44-201ENST00000508597 GGT6Q6P531 493 aa8.11□□□□□ -1.11
HMGB1P44-201ENST00000508597 TRAF7Q6Q0C0 670 aa8.11□□□□□ -1.11
HMGB1P44-201ENST00000508597 KLF16Q9BXK1 252 aaPredicted RBP8.11□□□□□ -1.11
HMGB1P44-201ENST00000508597 AAASQ9NRG9 546 aa8.11□□□□□ -1.11
HMGB1P44-201ENST00000508597 KDM5DQ9BY66 1539 aa8.11□□□□□ -1.11
HMGB1P44-201ENST00000508597 PRDM15P57071 1507 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P44-201ENST00000508597 SIGLEC1Q9BZZ2 1709 aa8.1□□□□□ -1.11
HMGB1P44-201ENST00000508597 NR1H3Q13133 447 aa8.1□□□□□ -1.11
HMGB1P44-201ENST00000508597 NNTQ13423 1086 aa8.1□□□□□ -1.11
HMGB1P44-201ENST00000508597 VASH1Q7L8A9 365 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P44-201ENST00000508597 WASF2Q9Y6W5 498 aa8.1□□□□□ -1.11
HMGB1P44-201ENST00000508597 ADAMTSL3P82987 1691 aa8.1□□□□□ -1.11
HMGB1P44-201ENST00000508597 ZC3H13Q5T200 1668 aaKnown RBP8.1□□□□□ -1.11
HMGB1P44-201ENST00000508597 UNC13BO14795 1591 aa8.1□□□□□ -1.11
HMGB1P44-201ENST00000508597 WASHC2CQ9Y4E1 1318 aa8.09□□□□□ -1.11
HMGB1P44-201ENST00000508597 POTECB2RU33 542 aa8.09□□□□□ -1.11
HMGB1P44-201ENST00000508597 KCTD15Q96SI1 283 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P44-201ENST00000508597 PCDHB9Q9Y5E1 797 aa8.09□□□□□ -1.11
HMGB1P44-201ENST00000508597 SETD1BQ9UPS6 1966 aaKnown RBP8.09□□□□□ -1.11
HMGB1P44-201ENST00000508597 VWDEQ8N2E2 1590 aa8.09□□□□□ -1.11
HMGB1P44-201ENST00000508597 LMTK2Q8IWU2 1503 aa8.08□□□□□ -1.12
HMGB1P44-201ENST00000508597 MROH2AA6NES4 1674 aa8.08□□□□□ -1.12
HMGB1P44-201ENST00000508597 MROH1Q8NDA8 1641 aa8.08□□□□□ -1.12
HMGB1P44-201ENST00000508597 FER1L4A9Z1Z3 1794 aa8.08□□□□□ -1.12
HMGB1P44-201ENST00000508597 A6NJR5 290 aa8.08□□□□□ -1.12
HMGB1P44-201ENST00000508597 FSHRP23945 695 aa8.08□□□□□ -1.12
HMGB1P44-201ENST00000508597 MLECQ14165 292 aa8.08□□□□□ -1.12
HMGB1P44-201ENST00000508597 PNMA1Q8ND90 353 aa8.08□□□□□ -1.12
HMGB1P44-201ENST00000508597 ZFAND3Q9H8U3 227 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms