RNA–Protein interactions for RNA: ENST00000508197.1

CAST-221, Transcript of calpastatin, humanhuman

TSL 3

Gene CAST, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-221ENST00000508197 IL2RBP14784 551 aa16.08■□□□□ 0.16
CAST-221ENST00000508197 ERBB3P21860 1342 aa16.08■□□□□ 0.16
CAST-221ENST00000508197 PNPLA7Q6ZV29 1317 aa16.08■□□□□ 0.16
CAST-221ENST00000508197 TRPM1Q7Z4N2 1603 aa16.08■□□□□ 0.16
CAST-221ENST00000508197 NKX1-1Q15270 411 aaPredicted RBP16.07■□□□□ 0.16
CAST-221ENST00000508197 SLC16A10Q8TF71 515 aa16.07■□□□□ 0.16
CAST-221ENST00000508197 FAM163AQ96GL9 167 aaPredicted RBP16.07■□□□□ 0.16
CAST-221ENST00000508197 NHSQ6T4R5 1651 aa16.06■□□□□ 0.16
CAST-221ENST00000508197 YBX3P16989 372 aaKnown RBP eCLIP16.05■□□□□ 0.165e-8■■■□□ 18.2
CAST-221ENST00000508197 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.05■□□□□ 0.16
CAST-221ENST00000508197 L3MBTL2Q969R5 705 aa16.05■□□□□ 0.16
CAST-221ENST00000508197 QRICH2Q9H0J4 1663 aa16.05■□□□□ 0.16
CAST-221ENST00000508197 SNPHO15079 494 aa16.04■□□□□ 0.16
CAST-221ENST00000508197 NME9Q86XW9 330 aa16.04■□□□□ 0.16
CAST-221ENST00000508197 ANKRD24Q8TF21 1146 aa16.04■□□□□ 0.16
CAST-221ENST00000508197 RYDENQ9NUL5 291 aaKnown RBP16.04■□□□□ 0.16
CAST-221ENST00000508197 ABCC6O95255 1503 aa16.04■□□□□ 0.16
CAST-221ENST00000508197 USP31Q70CQ4 1352 aa16.03■□□□□ 0.16
CAST-221ENST00000508197 KTN1Q86UP2 1357 aaKnown RBP16.03■□□□□ 0.16
CAST-221ENST00000508197 SLC27A3Q5K4L6 730 aa16.03■□□□□ 0.16
CAST-221ENST00000508197 POLD1P28340 1107 aa16.02■□□□□ 0.16
CAST-221ENST00000508197 DDX54Q8TDD1 881 aaKnown RBP16.02■□□□□ 0.16
CAST-221ENST00000508197 BTAF1O14981 1849 aa16.01■□□□□ 0.15
CAST-221ENST00000508197 PPP1R37O75864 691 aa16.01■□□□□ 0.15
CAST-221ENST00000508197 PRIM1P49642 420 aaKnown RBP16.01■□□□□ 0.15
CAST-221ENST00000508197 TFCP2L1Q9NZI6 479 aa16.01■□□□□ 0.15
CAST-221ENST00000508197 GOLGB1Q14789 3259 aaKnown RBP16.01■□□□□ 0.15
CAST-221ENST00000508197 SHANK3Q9BYB0 1731 aa16■□□□□ 0.15
CAST-221ENST00000508197 SBNO2Q9Y2G9 1366 aa16■□□□□ 0.15
CAST-221ENST00000508197 COL23A1Q86Y22 540 aaPredicted RBP15.99■□□□□ 0.15
CAST-221ENST00000508197 KAT6BQ8WYB5 2073 aa15.98■□□□□ 0.15
CAST-221ENST00000508197 CD163L1Q9NR16 1453 aa15.97■□□□□ 0.15
CAST-221ENST00000508197 CEP350Q5VT06 3117 aa15.97■□□□□ 0.15
CAST-221ENST00000508197 COL24A1Q17RW2 1714 aa15.97■□□□□ 0.15
CAST-221ENST00000508197 GRIN3BO60391 1043 aa15.97■□□□□ 0.15
CAST-221ENST00000508197 SYTL4Q96C24 671 aaPredicted RBP15.97■□□□□ 0.15
CAST-221ENST00000508197 SIN3AQ96ST3 1273 aa15.97■□□□□ 0.15
CAST-221ENST00000508197 SLC12A5Q9H2X9 1139 aa15.97■□□□□ 0.15
CAST-221ENST00000508197 NSD2O96028 1365 aa15.97■□□□□ 0.15
CAST-221ENST00000508197 TMEM92Q6UXU6 159 aa15.96■□□□□ 0.15
CAST-221ENST00000508197 IP6K1Q92551 441 aa15.96■□□□□ 0.15
CAST-221ENST00000508197 FBLN1P23142 703 aa15.95■□□□□ 0.14
CAST-221ENST00000508197 LTV1Q96GA3 475 aaPredicted RBP15.95■□□□□ 0.14
CAST-221ENST00000508197 ANKRD36BQ8N2N9 1353 aa15.94■□□□□ 0.14
CAST-221ENST00000508197 ATP10DQ9P241 1426 aa15.94■□□□□ 0.14
CAST-221ENST00000508197 ROCK2O75116 1388 aaKnown RBP15.93■□□□□ 0.14
CAST-221ENST00000508197 LCE2DQ5TA82 110 aaPredicted RBP15.93■□□□□ 0.14
CAST-221ENST00000508197 MSL1Q68DK7 614 aa15.93■□□□□ 0.14
CAST-221ENST00000508197 CCNL1Q9UK58 526 aaPredicted RBP15.93■□□□□ 0.14
CAST-221ENST00000508197 TMC1Q8TDI8 760 aa15.92■□□□□ 0.14
CAST-221ENST00000508197 QSER1Q2KHR3 1735 aa15.91■□□□□ 0.14
CAST-221ENST00000508197 TUBGCP6Q96RT7 1819 aa15.9■□□□□ 0.14
CAST-221ENST00000508197 ST18O60284 1047 aa15.9■□□□□ 0.14
CAST-221ENST00000508197 HSPA6P17066 643 aa15.9■□□□□ 0.14
CAST-221ENST00000508197 ZCRB1Q8TBF4 217 aaKnown RBP15.9■□□□□ 0.14
CAST-221ENST00000508197 MON2Q7Z3U7 1717 aa15.9■□□□□ 0.14
CAST-221ENST00000508197 GTPBP6O43824 516 aaPredicted RBP15.89■□□□□ 0.13
CAST-221ENST00000508197 GPBP1L1Q9HC44 474 aaPredicted RBP15.89■□□□□ 0.13
CAST-221ENST00000508197 CD2APQ9Y5K6 639 aa15.89■□□□□ 0.13
CAST-221ENST00000508197 USP54Q70EL1 1684 aa15.89■□□□□ 0.13
CAST-221ENST00000508197 LTN1O94822 1766 aa15.88■□□□□ 0.13
CAST-221ENST00000508197 HOXC9P31274 260 aa15.88■□□□□ 0.13
CAST-221ENST00000508197 HDGFL2Q7Z4V5 671 aaPredicted RBP15.88■□□□□ 0.13
CAST-221ENST00000508197 AMIGO3Q86WK7 504 aa15.88■□□□□ 0.13
CAST-221ENST00000508197 ZNF526Q8TF50 670 aaPredicted RBP15.88■□□□□ 0.13
CAST-221ENST00000508197 MAP3K19Q56UN5 1328 aa15.88■□□□□ 0.13
CAST-221ENST00000508197 ADCY9O60503 1353 aa15.87■□□□□ 0.13
CAST-221ENST00000508197 POTEMA6NI47 508 aa15.87■□□□□ 0.13
CAST-221ENST00000508197 NEUROD1Q13562 356 aa15.87■□□□□ 0.13
CAST-221ENST00000508197 SMIM5Q71RC9 77 aa15.87■□□□□ 0.13
CAST-221ENST00000508197 A0A1W2PP64 1363 aa15.87■□□□□ 0.13
CAST-221ENST00000508197 EDC4Q6P2E9 1401 aaKnown RBP15.86■□□□□ 0.13
CAST-221ENST00000508197 LY75O60449 1722 aa15.86■□□□□ 0.13
CAST-221ENST00000508197 MEGF6O75095 1541 aa15.86■□□□□ 0.13
CAST-221ENST00000508197 NBPF6Q5VWK0 638 aa15.86■□□□□ 0.13
CAST-221ENST00000508197 POTEGQ6S5H5 508 aa15.86■□□□□ 0.13
CAST-221ENST00000508197 BBXQ8WY36 941 aaPredicted RBP15.86■□□□□ 0.13
CAST-221ENST00000508197 NBPF4Q96M43 638 aa15.86■□□□□ 0.13
CAST-221ENST00000508197 WWC3Q9ULE0 1092 aa15.86■□□□□ 0.13
CAST-221ENST00000508197 USP47Q96K76 1375 aa15.85■□□□□ 0.13
CAST-221ENST00000508197 KIF3CO14782 793 aa15.84■□□□□ 0.13
CAST-221ENST00000508197 TMC2Q8TDI7 906 aa15.84■□□□□ 0.13
CAST-221ENST00000508197 TERF2IPQ9NYB0 399 aa15.84■□□□□ 0.13
CAST-221ENST00000508197 AMPHP49418 695 aa15.83■□□□□ 0.12
CAST-221ENST00000508197 DOK7Q18PE1 504 aa15.83■□□□□ 0.12
CAST-221ENST00000508197 USHBP1Q8N6Y0 703 aa15.83■□□□□ 0.12
CAST-221ENST00000508197 C2orf72A6NCS6 295 aa15.82■□□□□ 0.12
CAST-221ENST00000508197 HOXB3P14651 431 aaPredicted RBP15.82■□□□□ 0.12
CAST-221ENST00000508197 FAM208AQ9UK61 1670 aaKnown RBP15.82■□□□□ 0.12
CAST-221ENST00000508197 DOT1LQ8TEK3 1739 aa15.82■□□□□ 0.12
CAST-221ENST00000508197 ZNF710Q8N1W2 664 aa15.81■□□□□ 0.12
CAST-221ENST00000508197 CARD11Q9BXL7 1154 aa15.81■□□□□ 0.12
CAST-221ENST00000508197 IGSF1Q8N6C5 1336 aa15.8■□□□□ 0.12
CAST-221ENST00000508197 RRS1Q15050 365 aaKnown RBP15.8■□□□□ 0.12
CAST-221ENST00000508197 MPRIPQ6WCQ1 1025 aa15.8■□□□□ 0.12
CAST-221ENST00000508197 FLAD1Q8NFF5 587 aa15.8■□□□□ 0.12
CAST-221ENST00000508197 COG3Q96JB2 828 aa15.8■□□□□ 0.12
CAST-221ENST00000508197 PUS7Q96PZ0 661 aaKnown RBP15.8■□□□□ 0.12
CAST-221ENST00000508197 DNAJC5GQ8N7S2 189 aa15.79■□□□□ 0.12
CAST-221ENST00000508197 PALLDQ8WX93 1383 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms