RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 BRD1O95696 1058 aa6.36□□□□□ -1.39
LSM6-205ENST00000507449 ALDH1A1P00352 501 aa6.36□□□□□ -1.39
LSM6-205ENST00000507449 SCNN1DP51172 638 aa6.36□□□□□ -1.39
LSM6-205ENST00000507449 DHX9Q08211 1270 aaKnown RBP6.36□□□□□ -1.39
LSM6-205ENST00000507449 CLP1Q92989 425 aaKnown RBP6.36□□□□□ -1.39
LSM6-205ENST00000507449 SIRT1Q96EB6 747 aa6.36□□□□□ -1.39
LSM6-205ENST00000507449 PODXL2Q9NZ53 605 aa6.36□□□□□ -1.39
LSM6-205ENST00000507449 J3QL48 77 aa6.35□□□□□ -1.39
LSM6-205ENST00000507449 MYCP01106 439 aaPredicted RBP6.35□□□□□ -1.39
LSM6-205ENST00000507449 SMPD1P17405 629 aa6.35□□□□□ -1.39
LSM6-205ENST00000507449 NNTQ13423 1086 aa6.35□□□□□ -1.39
LSM6-205ENST00000507449 KLF16Q9BXK1 252 aaPredicted RBP6.35□□□□□ -1.39
LSM6-205ENST00000507449 LGR5O75473 907 aa6.34□□□□□ -1.39
LSM6-205ENST00000507449 SSFA2P28290 1259 aa6.34□□□□□ -1.39
LSM6-205ENST00000507449 SEC13P55735 322 aa6.34□□□□□ -1.39
LSM6-205ENST00000507449 PSME1Q06323 249 aa6.34□□□□□ -1.39
LSM6-205ENST00000507449 KDF1Q8NAX2 398 aaPredicted RBP6.34□□□□□ -1.39
LSM6-205ENST00000507449 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.34□□□□□ -1.39
LSM6-205ENST00000507449 ZNF358Q9NW07 568 aa6.34□□□□□ -1.39
LSM6-205ENST00000507449 ZBTB7CA1YPR0 619 aa6.33□□□□□ -1.4
LSM6-205ENST00000507449 SCNN1AP37088 669 aa6.33□□□□□ -1.4
LSM6-205ENST00000507449 OCLNQ16625 522 aa6.33□□□□□ -1.4
LSM6-205ENST00000507449 SWI5Q1ZZU3 235 aa6.33□□□□□ -1.4
LSM6-205ENST00000507449 GPAT2Q6NUI2 795 aa6.33□□□□□ -1.4
LSM6-205ENST00000507449 TSEN2Q8NCE0 465 aaKnown RBP6.33□□□□□ -1.4
LSM6-205ENST00000507449 ETNK1Q9HBU6 452 aa6.33□□□□□ -1.4
LSM6-205ENST00000507449 GDF10P55107 478 aa6.32□□□□□ -1.4
LSM6-205ENST00000507449 KCNA1Q09470 495 aa6.32□□□□□ -1.4
LSM6-205ENST00000507449 CBLBQ13191 982 aa6.32□□□□□ -1.4
LSM6-205ENST00000507449 ITPKCQ96DU7 683 aa6.32□□□□□ -1.4
LSM6-205ENST00000507449 KRTAP4-8Q9BYQ9 185 aa6.32□□□□□ -1.4
LSM6-205ENST00000507449 EMILIN1Q9Y6C2 1016 aa6.32□□□□□ -1.4
LSM6-205ENST00000507449 DNMT3AQ9Y6K1 912 aaPredicted RBP6.32□□□□□ -1.4
LSM6-205ENST00000507449 WASF2Q9Y6W5 498 aa6.32□□□□□ -1.4
LSM6-205ENST00000507449 M0R2N6 131 aa6.31□□□□□ -1.4
LSM6-205ENST00000507449 WASLO00401 505 aaPredicted RBP6.31□□□□□ -1.4
LSM6-205ENST00000507449 PRMT3O60678 531 aa6.31□□□□□ -1.4
LSM6-205ENST00000507449 TIMP2P16035 220 aa6.31□□□□□ -1.4
LSM6-205ENST00000507449 ATP2B4P23634 1241 aa6.31□□□□□ -1.4
LSM6-205ENST00000507449 GAS2L2Q8NHY3 880 aa6.31□□□□□ -1.4
LSM6-205ENST00000507449 PRIMPOLQ96LW4 560 aa6.31□□□□□ -1.4
LSM6-205ENST00000507449 ZFAND3Q9H8U3 227 aa6.31□□□□□ -1.4
LSM6-205ENST00000507449 PGPEP1Q9NXJ5 209 aa6.31□□□□□ -1.4
LSM6-205ENST00000507449 INHAP05111 366 aa6.3□□□□□ -1.4
LSM6-205ENST00000507449 ADH1AP07327 375 aa6.3□□□□□ -1.4
LSM6-205ENST00000507449 VEGFBP49765 207 aa6.3□□□□□ -1.4
LSM6-205ENST00000507449 EPHA4P54764 986 aa6.3□□□□□ -1.4
LSM6-205ENST00000507449 Q6ZVU0 165 aa6.3□□□□□ -1.4
LSM6-205ENST00000507449 CYP2U1Q7Z449 544 aa6.3□□□□□ -1.4
LSM6-205ENST00000507449 TXNDC2Q86VQ3 553 aa6.3□□□□□ -1.4
LSM6-205ENST00000507449 PSMG3-AS1Q96PY0 264 aa6.3□□□□□ -1.4
LSM6-205ENST00000507449 PURBQ96QR8 312 aaKnown RBP6.3□□□□□ -1.4
LSM6-205ENST00000507449 RAB6BQ9NRW1 208 aa6.3□□□□□ -1.4
LSM6-205ENST00000507449 IVNS1ABPQ9Y6Y0 642 aa6.3□□□□□ -1.4
LSM6-205ENST00000507449 ZIC2O95409 532 aaPredicted RBP6.29□□□□□ -1.4
LSM6-205ENST00000507449 GNRH1P01148 92 aa6.29□□□□□ -1.4
LSM6-205ENST00000507449 IL2RAP01589 272 aa6.29□□□□□ -1.4
LSM6-205ENST00000507449 WEE1P30291 646 aa6.29□□□□□ -1.4
LSM6-205ENST00000507449 WDR4P57081 412 aaKnown RBP6.29□□□□□ -1.4
LSM6-205ENST00000507449 TNS4Q8IZW8 715 aa6.29□□□□□ -1.4
LSM6-205ENST00000507449 HPS1Q92902 700 aa6.29□□□□□ -1.4
LSM6-205ENST00000507449 SLC4A9Q96Q91 983 aa6.29□□□□□ -1.4
LSM6-205ENST00000507449 ARHGEF10LQ9HCE6 1279 aa6.29□□□□□ -1.4
LSM6-205ENST00000507449 CXXC1Q9P0U4 656 aaPredicted RBP6.29□□□□□ -1.4
LSM6-205ENST00000507449 SERTAD1Q9UHV2 236 aa6.29□□□□□ -1.4
LSM6-205ENST00000507449 GNEQ9Y223 722 aaKnown RBP6.29□□□□□ -1.4
LSM6-205ENST00000507449 HRH3Q9Y5N1 445 aa6.29□□□□□ -1.4
LSM6-205ENST00000507449 ERBB4Q15303 1308 aa6.28□□□□□ -1.4
LSM6-205ENST00000507449 GSK3AP49840 483 aa6.28□□□□□ -1.4
LSM6-205ENST00000507449 TAS1R3Q7RTX0 852 aa6.28□□□□□ -1.4
LSM6-205ENST00000507449 C1orf216Q8TAB5 229 aa6.28□□□□□ -1.4
LSM6-205ENST00000507449 AGBL1Q96MI9 1066 aa6.28□□□□□ -1.4
LSM6-205ENST00000507449 HINFPQ9BQA5 517 aa6.28□□□□□ -1.4
LSM6-205ENST00000507449 GZF1Q9H116 711 aaPredicted RBP6.28□□□□□ -1.4
LSM6-205ENST00000507449 ESF1Q9H501 851 aaKnown RBP6.28□□□□□ -1.4
LSM6-205ENST00000507449 RBM19Q9Y4C8 960 aaKnown RBP6.28□□□□□ -1.4
LSM6-205ENST00000507449 C21orf2O43822 256 aa6.27□□□□□ -1.41
LSM6-205ENST00000507449 FKBP5Q13451 457 aaPredicted RBP6.27□□□□□ -1.41
LSM6-205ENST00000507449 B4GALNT3Q6L9W6 998 aa6.27□□□□□ -1.41
LSM6-205ENST00000507449 CAPN12Q6ZSI9 719 aa6.27□□□□□ -1.41
LSM6-205ENST00000507449 XAGE2Q96GT9 111 aa6.27□□□□□ -1.41
LSM6-205ENST00000507449 USP3Q9Y6I4 520 aa6.27□□□□□ -1.41
LSM6-205ENST00000507449 A0A1W2PRU2 124 aa6.26□□□□□ -1.41
LSM6-205ENST00000507449 PATL2C9JE40 543 aaKnown RBP6.26□□□□□ -1.41
LSM6-205ENST00000507449 PTGIRP43119 386 aa6.26□□□□□ -1.41
LSM6-205ENST00000507449 SERPINB4P48594 390 aa6.26□□□□□ -1.41
LSM6-205ENST00000507449 MTFR1Q15390 333 aa6.26□□□□□ -1.41
LSM6-205ENST00000507449 TSPAN10Q9H1Z9 355 aaPredicted RBP6.26□□□□□ -1.41
LSM6-205ENST00000507449 BACH1O14867 736 aa6.25□□□□□ -1.41
LSM6-205ENST00000507449 VSIG8P0DPA2 414 aa6.25□□□□□ -1.41
LSM6-205ENST00000507449 SMTNP53814 917 aa6.25□□□□□ -1.41
LSM6-205ENST00000507449 CLN3Q13286 438 aa6.25□□□□□ -1.41
LSM6-205ENST00000507449 ESCO1Q5FWF5 840 aa6.25□□□□□ -1.41
LSM6-205ENST00000507449 TBCELQ5QJ74 424 aa6.25□□□□□ -1.41
LSM6-205ENST00000507449 KANK3Q6NY19 840 aa6.25□□□□□ -1.41
LSM6-205ENST00000507449 ZNF295-AS1Q8N0V1 137 aa6.25□□□□□ -1.41
LSM6-205ENST00000507449 MEIOBQ8N635 442 aa6.25□□□□□ -1.41
LSM6-205ENST00000507449 CNKSR1Q969H4 720 aa6.25□□□□□ -1.41
LSM6-205ENST00000507449 TRIM52Q96A61 297 aa6.25□□□□□ -1.41
LSM6-205ENST00000507449 ESYT1Q9BSJ8 1104 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms