RNA–Protein interactions for RNA: ENST00000507320.5

TRIM6-209, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-209ENST00000507320 FAM196AQ6ZSG2 479 aa13.97□□□□□ -0.17
TRIM6-209ENST00000507320 NGEFQ8N5V2 710 aa13.97□□□□□ -0.17
TRIM6-209ENST00000507320 SLC52A2Q9HAB3 445 aa13.97□□□□□ -0.17
TRIM6-209ENST00000507320 CABP4P57796 275 aa13.96□□□□□ -0.17
TRIM6-209ENST00000507320 TEFQ10587 303 aa13.96□□□□□ -0.17
TRIM6-209ENST00000507320 SPINK5Q9NQ38 1064 aaPredicted RBP13.96□□□□□ -0.17
TRIM6-209ENST00000507320 NHSQ6T4R5 1651 aa13.96□□□□□ -0.17
TRIM6-209ENST00000507320 PIGBQ92521 554 aa13.96□□□□□ -0.18
TRIM6-209ENST00000507320 MIS18AQ9NYP9 233 aa13.96□□□□□ -0.18
TRIM6-209ENST00000507320 TMOD3Q9NYL9 352 aa13.95□□□□□ -0.18
TRIM6-209ENST00000507320 ZBED9Q6R2W3 1325 aa13.95□□□□□ -0.18
TRIM6-209ENST00000507320 TRIM37O94972 964 aa13.94□□□□□ -0.18
TRIM6-209ENST00000507320 CDCA7LQ96GN5 454 aa13.94□□□□□ -0.18
TRIM6-209ENST00000507320 BTAF1O14981 1849 aa13.94□□□□□ -0.18
TRIM6-209ENST00000507320 SLC39A6Q13433 755 aa13.94□□□□□ -0.18
TRIM6-209ENST00000507320 TAF7Q15545 349 aaPredicted RBP13.94□□□□□ -0.18
TRIM6-209ENST00000507320 ILDR2Q71H61 639 aa13.94□□□□□ -0.18
TRIM6-209ENST00000507320 WDR63Q8IWG1 891 aa13.94□□□□□ -0.18
TRIM6-209ENST00000507320 LAS1LQ9Y4W2 734 aaKnown RBP13.94□□□□□ -0.18
TRIM6-209ENST00000507320 KCNQ3O43525 872 aa13.93□□□□□ -0.18
TRIM6-209ENST00000507320 ZNF853P0CG23 659 aa13.93□□□□□ -0.18
TRIM6-209ENST00000507320 BTBD11A6QL63 1104 aa13.92□□□□□ -0.18
TRIM6-209ENST00000507320 KDM3BQ7LBC6 1761 aa13.92□□□□□ -0.18
TRIM6-209ENST00000507320 CFAP44Q96MT7 982 aa13.92□□□□□ -0.18
TRIM6-209ENST00000507320 ASAP1Q9ULH1 1129 aa13.92□□□□□ -0.18
TRIM6-209ENST00000507320 PAPPAQ13219 1627 aa13.92□□□□□ -0.18
TRIM6-209ENST00000507320 CHL1O00533 1208 aa13.91□□□□□ -0.18
TRIM6-209ENST00000507320 GOLGA2Q08379 1002 aa13.91□□□□□ -0.18
TRIM6-209ENST00000507320 TSR2Q969E8 191 aaKnown RBP13.91□□□□□ -0.18
TRIM6-209ENST00000507320 BCL11BQ9C0K0 894 aaPredicted RBP13.91□□□□□ -0.18
TRIM6-209ENST00000507320 MBIPQ9NS73 344 aa13.91□□□□□ -0.18
TRIM6-209ENST00000507320 IFT57Q9NWB7 429 aa13.91□□□□□ -0.18
TRIM6-209ENST00000507320 IL16Q14005 1332 aa13.91□□□□□ -0.18
TRIM6-209ENST00000507320 CALD1Q05682 793 aaKnown RBP13.91□□□□□ -0.18
TRIM6-209ENST00000507320 ATG3Q9NT62 314 aa13.91□□□□□ -0.18
TRIM6-209ENST00000507320 TSPYL4Q9UJ04 414 aa13.91□□□□□ -0.18
TRIM6-209ENST00000507320 TNS1Q9HBL0 1735 aaKnown RBP13.9□□□□□ -0.18
TRIM6-209ENST00000507320 GNAI1P63096 354 aa13.9□□□□□ -0.18
TRIM6-209ENST00000507320 ZNF790Q6PG37 636 aa13.9□□□□□ -0.18
TRIM6-209ENST00000507320 SLFN5Q08AF3 891 aa13.89□□□□□ -0.19
TRIM6-209ENST00000507320 UBR2Q8IWV8 1755 aa13.89□□□□□ -0.19
TRIM6-209ENST00000507320 FANCIQ9NVI1 1328 aa13.89□□□□□ -0.19
TRIM6-209ENST00000507320 KRT24Q2M2I5 525 aa13.88□□□□□ -0.19
TRIM6-209ENST00000507320 KCPQ6ZWJ8 1503 aa13.88□□□□□ -0.19
TRIM6-209ENST00000507320 E9PSI1 815 aa13.87□□□□□ -0.19
TRIM6-209ENST00000507320 PTCD1O75127 700 aaKnown RBP13.87□□□□□ -0.19
TRIM6-209ENST00000507320 TRMT2AQ8IZ69 625 aaKnown RBP13.87□□□□□ -0.19
TRIM6-209ENST00000507320 ZNF496Q96IT1 587 aaPredicted RBP13.87□□□□□ -0.19
TRIM6-209ENST00000507320 BABAM1Q9NWV8 329 aa13.87□□□□□ -0.19
TRIM6-209ENST00000507320 PALLDQ8WX93 1383 aa13.87□□□□□ -0.19
TRIM6-209ENST00000507320 EIF4A1P60842 406 aaKnown RBP13.86□□□□□ -0.19
TRIM6-209ENST00000507320 DUSP27Q5VZP5 1158 aa13.86□□□□□ -0.19
TRIM6-209ENST00000507320 TTC5Q8N0Z6 440 aa13.86□□□□□ -0.19
TRIM6-209ENST00000507320 SLC4A9Q96Q91 983 aa13.86□□□□□ -0.19
TRIM6-209ENST00000507320 APBA3O96018 575 aa13.86□□□□□ -0.19
TRIM6-209ENST00000507320 MYH16Q9H6N6 1097 aa13.86□□□□□ -0.19
TRIM6-209ENST00000507320 LY75O60449 1722 aa13.85□□□□□ -0.19
TRIM6-209ENST00000507320 PRAMEF22A3QJZ6 481 aa13.85□□□□□ -0.19
TRIM6-209ENST00000507320 RBM42Q9BTD8 480 aaKnown RBP13.85□□□□□ -0.19
TRIM6-209ENST00000507320 KCNQ4P56696 695 aa13.84□□□□□ -0.19
TRIM6-209ENST00000507320 TSPYL6Q8N831 410 aa13.84□□□□□ -0.19
TRIM6-209ENST00000507320 C8orf58Q8NAV2 365 aa13.84□□□□□ -0.19
TRIM6-209ENST00000507320 SMARCC1Q92922 1105 aaPredicted RBP13.84□□□□□ -0.19
TRIM6-209ENST00000507320 HEG1Q9ULI3 1381 aa13.84□□□□□ -0.19
TRIM6-209ENST00000507320 C5P01031 1676 aa13.84□□□□□ -0.19
TRIM6-209ENST00000507320 LOC102724428A0A0B4J2F2 783 aa13.83□□□□□ -0.19
TRIM6-209ENST00000507320 ELL2O00472 640 aaPredicted RBP13.83□□□□□ -0.19
TRIM6-209ENST00000507320 SIK1P57059 783 aa13.83□□□□□ -0.19
TRIM6-209ENST00000507320 EXOSC9Q06265 439 aaKnown RBP13.83□□□□□ -0.19
TRIM6-209ENST00000507320 FMNL2Q96PY5 1086 aa13.83□□□□□ -0.19
TRIM6-209ENST00000507320 PROM2Q8N271 834 aa13.83□□□□□ -0.2
TRIM6-209ENST00000507320 PLSCR1O15162 318 aa13.82□□□□□ -0.2
TRIM6-209ENST00000507320 GIGYF1O75420 1035 aaPredicted RBP13.82□□□□□ -0.2
TRIM6-209ENST00000507320 DEFB132Q7Z7B7 95 aa13.82□□□□□ -0.2
TRIM6-209ENST00000507320 UPF1Q92900 1129 aaKnown RBP eCLIP13.82□□□□□ -0.2
TRIM6-209ENST00000507320 TJP1Q07157 1748 aa13.82□□□□□ -0.2
TRIM6-209ENST00000507320 EN1Q05925 392 aaPredicted RBP13.81□□□□□ -0.2
TRIM6-209ENST00000507320 ITPK1Q13572 414 aa13.81□□□□□ -0.2
TRIM6-209ENST00000507320 LRRC4BQ9NT99 713 aa13.81□□□□□ -0.2
TRIM6-209ENST00000507320 ATP6V1AP38606 617 aa13.81□□□□□ -0.2
TRIM6-209ENST00000507320 DNAJC10Q8IXB1 793 aa13.81□□□□□ -0.2
TRIM6-209ENST00000507320 USP16Q9Y5T5 823 aa13.81□□□□□ -0.2
TRIM6-209ENST00000507320 RGPD3A6NKT7 1758 aaPredicted RBP13.8□□□□□ -0.2
TRIM6-209ENST00000507320 RGPD4Q7Z3J3 1758 aa13.8□□□□□ -0.2
TRIM6-209ENST00000507320 SNRPA1P09661 255 aaKnown RBP13.8□□□□□ -0.2
TRIM6-209ENST00000507320 SF3B2Q13435 895 aaKnown RBP13.8□□□□□ -0.2
TRIM6-209ENST00000507320 EZH2Q15910 746 aaKnown RBP13.8□□□□□ -0.2
TRIM6-209ENST00000507320 TXNRD1Q16881 649 aa13.8□□□□□ -0.2
TRIM6-209ENST00000507320 CAMKK2Q96RR4 588 aa13.8□□□□□ -0.2
TRIM6-209ENST00000507320 CCNL1Q9UK58 526 aaPredicted RBP13.8□□□□□ -0.2
TRIM6-209ENST00000507320 TAF1LQ8IZX4 1826 aa13.8□□□□□ -0.2
TRIM6-209ENST00000507320 ZNF831Q5JPB2 1677 aa13.8□□□□□ -0.2
TRIM6-209ENST00000507320 TWISTNBQ3B726 338 aaPredicted RBP13.79□□□□□ -0.2
TRIM6-209ENST00000507320 VSIG10Q8N0Z9 540 aa13.79□□□□□ -0.2
TRIM6-209ENST00000507320 CICQ96RK0 1608 aaPredicted RBP13.79□□□□□ -0.2
TRIM6-209ENST00000507320 COL5A3P25940 1745 aaPredicted RBP13.79□□□□□ -0.2
TRIM6-209ENST00000507320 LAMB4A4D0S4 1761 aa13.79□□□□□ -0.2
TRIM6-209ENST00000507320 VAMP4O75379 141 aa13.78□□□□□ -0.2
TRIM6-209ENST00000507320 BAG6P46379 1132 aa13.78□□□□□ -0.2
TRIM6-209ENST00000507320 CCDC125Q86Z20 511 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms