RNA–Protein interactions for RNA: ENST00000506714.5

HERC6-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 2

Gene HERC6, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-206ENST00000506714 NALCNQ8IZF0 1738 aa18.36■□□□□ 0.53
HERC6-206ENST00000506714 APBB1O00213 710 aa18.36■□□□□ 0.53
HERC6-206ENST00000506714 PDLIM2Q96JY6 352 aa18.36■□□□□ 0.53
HERC6-206ENST00000506714 CRB1P82279 1406 aa18.36■□□□□ 0.53
HERC6-206ENST00000506714 TTC21BQ7Z4L5 1316 aa18.36■□□□□ 0.53
HERC6-206ENST00000506714 ZDHHC9Q9Y397 364 aa18.35■□□□□ 0.53
HERC6-206ENST00000506714 MBD3O95983 291 aa18.35■□□□□ 0.53
HERC6-206ENST00000506714 MCCP23508 829 aa18.35■□□□□ 0.53
HERC6-206ENST00000506714 RBSNQ9H1K0 784 aa18.35■□□□□ 0.53
HERC6-206ENST00000506714 CACNA1FO60840 1977 aa18.35■□□□□ 0.53
HERC6-206ENST00000506714 GPT2Q8TD30 523 aa18.34■□□□□ 0.53
HERC6-206ENST00000506714 NCKAP5LQ9HCH0 1330 aa18.34■□□□□ 0.53
HERC6-206ENST00000506714 OVOS2A0A0J9YW53 1432 aa18.34■□□□□ 0.53
HERC6-206ENST00000506714 OVOS2Q6IE36 1432 aa18.34■□□□□ 0.53
HERC6-206ENST00000506714 LRSAM1Q6UWE0 723 aa18.34■□□□□ 0.53
HERC6-206ENST00000506714 KIAA1211Q6ZU35 1233 aa18.34■□□□□ 0.53
HERC6-206ENST00000506714 NOL7Q9UMY1 257 aaKnown RBP18.34■□□□□ 0.53
HERC6-206ENST00000506714 ARHGEF10O15013 1369 aa18.33■□□□□ 0.53
HERC6-206ENST00000506714 GNAI2P04899 355 aa18.33■□□□□ 0.53
HERC6-206ENST00000506714 PRIM1P49642 420 aaKnown RBP18.33■□□□□ 0.53
HERC6-206ENST00000506714 ANAPC15P60006 121 aa18.33■□□□□ 0.53
HERC6-206ENST00000506714 NEK4P51957 841 aa18.33■□□□□ 0.52
HERC6-206ENST00000506714 TOPAZ1Q8N9V7 1692 aa18.32■□□□□ 0.52
HERC6-206ENST00000506714 PEAK1Q9H792 1746 aa18.32■□□□□ 0.52
HERC6-206ENST00000506714 TMX3Q96JJ7 454 aa18.32■□□□□ 0.52
HERC6-206ENST00000506714 PRR36Q9H6K5 1346 aa18.32■□□□□ 0.52
HERC6-206ENST00000506714 FMN2Q9NZ56 1722 aa18.32■□□□□ 0.52
HERC6-206ENST00000506714 ZNF500O60304 480 aaPredicted RBP18.32■□□□□ 0.52
HERC6-206ENST00000506714 MCM5P33992 734 aa18.32■□□□□ 0.52
HERC6-206ENST00000506714 RTF1Q92541 710 aaKnown RBP18.32■□□□□ 0.52
HERC6-206ENST00000506714 INTS4Q96HW7 963 aaKnown RBP18.32■□□□□ 0.52
HERC6-206ENST00000506714 SSH2Q76I76 1423 aa18.31■□□□□ 0.52
HERC6-206ENST00000506714 CHD2O14647 1828 aaKnown RBP18.31■□□□□ 0.52
HERC6-206ENST00000506714 CUL4AQ13619 759 aa18.31■□□□□ 0.52
HERC6-206ENST00000506714 ESYT1Q9BSJ8 1104 aa18.31■□□□□ 0.52
HERC6-206ENST00000506714 SLC4A10Q6U841 1118 aa18.3■□□□□ 0.52
HERC6-206ENST00000506714 LRRCC1Q9C099 1032 aa18.3■□□□□ 0.52
HERC6-206ENST00000506714 SALL3Q9BXA9 1300 aa18.3■□□□□ 0.52
HERC6-206ENST00000506714 USP31Q70CQ4 1352 aa18.3■□□□□ 0.52
HERC6-206ENST00000506714 EPB41L2O43491 1005 aaKnown RBP18.3■□□□□ 0.52
HERC6-206ENST00000506714 GNAI3P08754 354 aa18.3■□□□□ 0.52
HERC6-206ENST00000506714 SRCIN1Q9C0H9 1055 aa18.3■□□□□ 0.52
HERC6-206ENST00000506714 TSPYL4Q9UJ04 414 aa18.3■□□□□ 0.52
HERC6-206ENST00000506714 PLEKHG3A1L390 1219 aa18.29■□□□□ 0.52
HERC6-206ENST00000506714 BRD1O95696 1058 aa18.29■□□□□ 0.52
HERC6-206ENST00000506714 IL17RAQ96F46 866 aa18.29■□□□□ 0.52
HERC6-206ENST00000506714 HSP90AB2PQ58FF8 381 aa18.29■□□□□ 0.52
HERC6-206ENST00000506714 STK31Q9BXU1 1019 aa18.29■□□□□ 0.52
HERC6-206ENST00000506714 TMEM63CQ9P1W3 806 aa18.29■□□□□ 0.52
HERC6-206ENST00000506714 MX1P20591 662 aa18.28■□□□□ 0.52
HERC6-206ENST00000506714 RBM27Q9P2N5 1060 aaKnown RBP18.28■□□□□ 0.52
HERC6-206ENST00000506714 N4BP2Q86UW6 1770 aaPredicted RBP18.28■□□□□ 0.52
HERC6-206ENST00000506714 ACEP12821 1306 aa18.28■□□□□ 0.52
HERC6-206ENST00000506714 KCNA6P17658 529 aa18.28■□□□□ 0.52
HERC6-206ENST00000506714 G2E3Q7L622 706 aa18.28■□□□□ 0.52
HERC6-206ENST00000506714 SYAP1Q96A49 352 aaPredicted RBP18.28■□□□□ 0.52
HERC6-206ENST00000506714 PDCL3Q9H2J4 239 aa18.28■□□□□ 0.52
HERC6-206ENST00000506714 USP6P35125 1406 aa18.27■□□□□ 0.52
HERC6-206ENST00000506714 NPHP4O75161 1426 aaPredicted RBP18.27■□□□□ 0.51
HERC6-206ENST00000506714 F6X3S4 739 aa18.26■□□□□ 0.51
HERC6-206ENST00000506714 ATP8B2P98198 1209 aa18.26■□□□□ 0.51
HERC6-206ENST00000506714 CSPP1Q1MSJ5 1256 aa18.26■□□□□ 0.51
HERC6-206ENST00000506714 CCDC39Q9UFE4 941 aa18.26■□□□□ 0.51
HERC6-206ENST00000506714 STAP2Q9UGK3 403 aa18.26■□□□□ 0.51
HERC6-206ENST00000506714 SOS1Q07889 1333 aaPredicted RBP18.26■□□□□ 0.51
HERC6-206ENST00000506714 SYCE3A1L190 88 aa18.26■□□□□ 0.51
HERC6-206ENST00000506714 NUTM2FA1L443 756 aa18.26■□□□□ 0.51
HERC6-206ENST00000506714 EXOC6BQ9Y2D4 811 aa18.26■□□□□ 0.51
HERC6-206ENST00000506714 ZKSCAN5Q9Y2L8 839 aa18.26■□□□□ 0.51
HERC6-206ENST00000506714 AOX1Q06278 1338 aa18.26■□□□□ 0.51
HERC6-206ENST00000506714 HTATSF1O43719 755 aaKnown RBP18.25■□□□□ 0.51
HERC6-206ENST00000506714 CHMLP26374 656 aa18.25■□□□□ 0.51
HERC6-206ENST00000506714 FAM208AQ9UK61 1670 aaKnown RBP18.25■□□□□ 0.51
HERC6-206ENST00000506714 RGPD8O14715 1765 aaPredicted RBP18.25■□□□□ 0.51
HERC6-206ENST00000506714 MTHFSDQ2M296 383 aaKnown RBP18.25■□□□□ 0.51
HERC6-206ENST00000506714 CCDC30Q5VVM6 783 aa18.25■□□□□ 0.51
HERC6-206ENST00000506714 MIS18AQ9NYP9 233 aa18.25■□□□□ 0.51
HERC6-206ENST00000506714 KDRP35968 1356 aa18.25■□□□□ 0.51
HERC6-206ENST00000506714 MAP3K19Q56UN5 1328 aa18.24■□□□□ 0.51
HERC6-206ENST00000506714 PHF14O94880 888 aa18.24■□□□□ 0.51
HERC6-206ENST00000506714 ANO2Q9NQ90 1003 aa18.24■□□□□ 0.51
HERC6-206ENST00000506714 TTC21AQ8NDW8 1320 aa18.23■□□□□ 0.51
HERC6-206ENST00000506714 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.23■□□□□ 0.51
HERC6-206ENST00000506714 TRIM6-TRIM34B2RNG4 842 aa18.23■□□□□ 0.51
HERC6-206ENST00000506714 FLIIQ13045 1269 aa18.23■□□□□ 0.51
HERC6-206ENST00000506714 SBNO1A3KN83 1393 aa18.23■□□□□ 0.51
HERC6-206ENST00000506714 FLT4P35916 1363 aa18.23■□□□□ 0.51
HERC6-206ENST00000506714 LRRC37A3O60309 1634 aa18.22■□□□□ 0.51
HERC6-206ENST00000506714 RILPL2Q969X0 211 aa18.22■□□□□ 0.51
HERC6-206ENST00000506714 TSPY26PQ9H489 355 aa18.22■□□□□ 0.51
HERC6-206ENST00000506714 NSFL1CQ9UNZ2 370 aaKnown RBP18.22■□□□□ 0.51
HERC6-206ENST00000506714 PXDNLA1KZ92 1463 aa18.22■□□□□ 0.51
HERC6-206ENST00000506714 FOXO3O43524 673 aa18.21■□□□□ 0.51
HERC6-206ENST00000506714 FKBP5Q13451 457 aaPredicted RBP18.21■□□□□ 0.51
HERC6-206ENST00000506714 PALD1Q9ULE6 856 aa18.21■□□□□ 0.51
HERC6-206ENST00000506714 WDR33Q9C0J8 1336 aaKnown RBP18.21■□□□□ 0.51
HERC6-206ENST00000506714 FOXD4L5Q5VV16 416 aaPredicted RBP18.2■□□□□ 0.5
HERC6-206ENST00000506714 FOXD4L4Q8WXT5 416 aaPredicted RBP18.2■□□□□ 0.5
HERC6-206ENST00000506714 PNMA6EA0A0J9YXQ4 647 aa18.2■□□□□ 0.5
HERC6-206ENST00000506714 MAP7D2Q96T17 732 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms