RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 CCDC146Q8IYE0 955 aa18.25■□□□□ 0.51
SERF1B-204ENST00000506542 NFATC2IPQ8NCF5 419 aa18.25■□□□□ 0.51
SERF1B-204ENST00000506542 ATG3Q9NT62 314 aa18.25■□□□□ 0.51
SERF1B-204ENST00000506542 AKAP4Q5JQC9 854 aa18.25■□□□□ 0.51
SERF1B-204ENST00000506542 SMIM5Q71RC9 77 aa18.25■□□□□ 0.51
SERF1B-204ENST00000506542 CASZ1Q86V15 1759 aa18.25■□□□□ 0.51
SERF1B-204ENST00000506542 CABP4P57796 275 aa18.24■□□□□ 0.51
SERF1B-204ENST00000506542 SLC15A2Q16348 729 aa18.24■□□□□ 0.51
SERF1B-204ENST00000506542 STK32BQ9NY57 414 aa18.24■□□□□ 0.51
SERF1B-204ENST00000506542 ERVV-2B6SEH9 535 aa18.22■□□□□ 0.51
SERF1B-204ENST00000506542 RNMTO43148 476 aaKnown RBP18.22■□□□□ 0.51
SERF1B-204ENST00000506542 HSP90AB1P08238 724 aaKnown RBP18.22■□□□□ 0.51
SERF1B-204ENST00000506542 RUNDC1Q96C34 613 aa18.22■□□□□ 0.51
SERF1B-204ENST00000506542 ADAMTS7Q9UKP4 1686 aa18.22■□□□□ 0.51
SERF1B-204ENST00000506542 DLG5Q8TDM6 1919 aa18.22■□□□□ 0.51
SERF1B-204ENST00000506542 SLC27A3Q5K4L6 730 aa18.22■□□□□ 0.51
SERF1B-204ENST00000506542 NGEFQ8N5V2 710 aa18.22■□□□□ 0.51
SERF1B-204ENST00000506542 AKT1S1Q96B36 256 aa18.22■□□□□ 0.51
SERF1B-204ENST00000506542 SLC4A9Q96Q91 983 aa18.22■□□□□ 0.51
SERF1B-204ENST00000506542 SALL2Q9Y467 1007 aaPredicted RBP18.22■□□□□ 0.51
SERF1B-204ENST00000506542 APAF1O14727 1248 aa18.21■□□□□ 0.51
SERF1B-204ENST00000506542 ITPK1Q13572 414 aa18.21■□□□□ 0.51
SERF1B-204ENST00000506542 AMIGO3Q86WK7 504 aa18.21■□□□□ 0.51
SERF1B-204ENST00000506542 LOC102724428A0A0B4J2F2 783 aa18.2■□□□□ 0.5
SERF1B-204ENST00000506542 ZBTB7AO95365 584 aa18.2■□□□□ 0.5
SERF1B-204ENST00000506542 SIK1P57059 783 aa18.2■□□□□ 0.5
SERF1B-204ENST00000506542 SLC39A6Q13433 755 aa18.2■□□□□ 0.5
SERF1B-204ENST00000506542 IL17REQ8NFR9 667 aa18.2■□□□□ 0.5
SERF1B-204ENST00000506542 MAP3K5Q99683 1374 aa18.2■□□□□ 0.5
SERF1B-204ENST00000506542 C4BP0C0L5 1744 aa18.2■□□□□ 0.5
SERF1B-204ENST00000506542 PTCD1O75127 700 aaKnown RBP18.19■□□□□ 0.5
SERF1B-204ENST00000506542 FCHSD2O94868 740 aa18.19■□□□□ 0.5
SERF1B-204ENST00000506542 DCTN1Q14203 1278 aa18.19■□□□□ 0.5
SERF1B-204ENST00000506542 RBM42Q9BTD8 480 aaKnown RBP18.19■□□□□ 0.5
SERF1B-204ENST00000506542 ZNF521Q96K83 1311 aa18.19■□□□□ 0.5
SERF1B-204ENST00000506542 LINC00116Q8NCU8 138 aa18.18■□□□□ 0.5
SERF1B-204ENST00000506542 SMARCC1Q92922 1105 aaPredicted RBP18.18■□□□□ 0.5
SERF1B-204ENST00000506542 SLC52A2Q9HAB3 445 aa18.18■□□□□ 0.5
SERF1B-204ENST00000506542 GTF3C3Q9Y5Q9 886 aa18.18■□□□□ 0.5
SERF1B-204ENST00000506542 SIPA1L3O60292 1781 aaPredicted RBP18.18■□□□□ 0.5
SERF1B-204ENST00000506542 MRC1P22897 1456 aa18.18■□□□□ 0.5
SERF1B-204ENST00000506542 GNAT3A8MTJ3 354 aa18.18■□□□□ 0.5
SERF1B-204ENST00000506542 MCM10Q7L590 875 aa18.18■□□□□ 0.5
SERF1B-204ENST00000506542 GAS2L2Q8NHY3 880 aa18.18■□□□□ 0.5
SERF1B-204ENST00000506542 PLEKHF1Q96S99 279 aa18.18■□□□□ 0.5
SERF1B-204ENST00000506542 ATP6V1AP38606 617 aa18.17■□□□□ 0.5
SERF1B-204ENST00000506542 TFCP2L1Q9NZI6 479 aa18.17■□□□□ 0.5
SERF1B-204ENST00000506542 LRP5O75197 1615 aa18.17■□□□□ 0.5
SERF1B-204ENST00000506542 PNPLA7Q6ZV29 1317 aa18.17■□□□□ 0.5
SERF1B-204ENST00000506542 ATF5Q9Y2D1 282 aaPredicted RBP18.16■□□□□ 0.5
SERF1B-204ENST00000506542 PNNQ9H307 717 aaKnown RBP18.15■□□□□ 0.5
SERF1B-204ENST00000506542 UBR3Q6ZT12 1888 aa18.15■□□□□ 0.5
SERF1B-204ENST00000506542 TJP1Q07157 1748 aa18.15■□□□□ 0.5
SERF1B-204ENST00000506542 QSER1Q2KHR3 1735 aa18.15■□□□□ 0.5
SERF1B-204ENST00000506542 MYH14Q7Z406 1995 aaKnown RBP18.15■□□□□ 0.5
SERF1B-204ENST00000506542 NCBP3Q53F19 620 aaKnown RBP18.15■□□□□ 0.5
SERF1B-204ENST00000506542 COL5A3P25940 1745 aaPredicted RBP18.14■□□□□ 0.5
SERF1B-204ENST00000506542 PHF14O94880 888 aa18.13■□□□□ 0.49
SERF1B-204ENST00000506542 THUMPD2Q9BTF0 503 aaKnown RBP18.13■□□□□ 0.49
SERF1B-204ENST00000506542 KCPQ6ZWJ8 1503 aa18.13■□□□□ 0.49
SERF1B-204ENST00000506542 KCNQ3O43525 872 aa18.12■□□□□ 0.49
SERF1B-204ENST00000506542 COL23A1Q86Y22 540 aaPredicted RBP18.12■□□□□ 0.49
SERF1B-204ENST00000506542 CDCA7LQ96GN5 454 aa18.12■□□□□ 0.49
SERF1B-204ENST00000506542 GOLGB1Q14789 3259 aaKnown RBP18.12■□□□□ 0.49
SERF1B-204ENST00000506542 MAPK8IP3Q9UPT6 1336 aa18.12■□□□□ 0.49
SERF1B-204ENST00000506542 UBR2Q8IWV8 1755 aa18.12■□□□□ 0.49
SERF1B-204ENST00000506542 MSH5O43196 834 aa18.12■□□□□ 0.49
SERF1B-204ENST00000506542 RRP7AQ9Y3A4 280 aaKnown RBP18.12■□□□□ 0.49
SERF1B-204ENST00000506542 CEMIPQ8WUJ3 1361 aa18.11■□□□□ 0.49
SERF1B-204ENST00000506542 TEFQ10587 303 aa18.11■□□□□ 0.49
SERF1B-204ENST00000506542 CCDC27Q2M243 656 aa18.11■□□□□ 0.49
SERF1B-204ENST00000506542 GOLGA2Q08379 1002 aa18.1■□□□□ 0.49
SERF1B-204ENST00000506542 AK7Q96M32 723 aa18.1■□□□□ 0.49
SERF1B-204ENST00000506542 ZNF831Q5JPB2 1677 aa18.1■□□□□ 0.49
SERF1B-204ENST00000506542 MSL1Q68DK7 614 aa18.09■□□□□ 0.49
SERF1B-204ENST00000506542 WWC1Q8IX03 1113 aa18.09■□□□□ 0.49
SERF1B-204ENST00000506542 SPON1Q9HCB6 807 aa18.09■□□□□ 0.49
SERF1B-204ENST00000506542 MIS18AQ9NYP9 233 aa18.09■□□□□ 0.49
SERF1B-204ENST00000506542 GNPATO15228 680 aa18.09■□□□□ 0.49
SERF1B-204ENST00000506542 TMPOP42166 694 aaKnown RBP18.09■□□□□ 0.49
SERF1B-204ENST00000506542 PTGER2P43116 358 aa18.09■□□□□ 0.49
SERF1B-204ENST00000506542 NFE2L2Q16236 605 aa18.09■□□□□ 0.49
SERF1B-204ENST00000506542 DNAJC10Q8IXB1 793 aa18.09■□□□□ 0.49
SERF1B-204ENST00000506542 NEUROD2Q15784 382 aa18.08■□□□□ 0.48
SERF1B-204ENST00000506542 RTF1Q92541 710 aaKnown RBP18.08■□□□□ 0.48
SERF1B-204ENST00000506542 SUPT16HQ9Y5B9 1047 aaKnown RBP18.08■□□□□ 0.48
SERF1B-204ENST00000506542 NEFMP07197 916 aa18.07■□□□□ 0.48
SERF1B-204ENST00000506542 UTRNP46939 3433 aa18.06■□□□□ 0.48
SERF1B-204ENST00000506542 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.06■□□□□ 0.48
SERF1B-204ENST00000506542 SLFN5Q08AF3 891 aa18.06■□□□□ 0.48
SERF1B-204ENST00000506542 ZNF496Q96IT1 587 aaPredicted RBP18.06■□□□□ 0.48
SERF1B-204ENST00000506542 ZNF790Q6PG37 636 aa18.06■□□□□ 0.48
SERF1B-204ENST00000506542 TRMT2AQ8IZ69 625 aaKnown RBP18.06■□□□□ 0.48
SERF1B-204ENST00000506542 MTFR1LQ9H019 292 aa18.06■□□□□ 0.48
SERF1B-204ENST00000506542 PRAMEF22A3QJZ6 481 aa18.05■□□□□ 0.48
SERF1B-204ENST00000506542 BTBD11A6QL63 1104 aa18.05■□□□□ 0.48
SERF1B-204ENST00000506542 CRKLP46109 303 aaKnown RBP18.05■□□□□ 0.48
SERF1B-204ENST00000506542 DUSP27Q5VZP5 1158 aa18.05■□□□□ 0.48
SERF1B-204ENST00000506542 WDR63Q8IWG1 891 aa18.05■□□□□ 0.48
SERF1B-204ENST00000506542 SGIP1Q9BQI5 828 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms