RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 KDRP35968 1356 aa9.35□□□□□ -0.91
PPARGC1A-204ENST00000506055 TRIM6-TRIM34B2RNG4 842 aa9.35□□□□□ -0.91
PPARGC1A-204ENST00000506055 ABTB2Q8N961 1025 aa9.35□□□□□ -0.91
PPARGC1A-204ENST00000506055 RILPL2Q969X0 211 aa9.35□□□□□ -0.91
PPARGC1A-204ENST00000506055 ISY1Q9ULR0 285 aaKnown RBP9.35□□□□□ -0.91
PPARGC1A-204ENST00000506055 GNAI3P08754 354 aa9.35□□□□□ -0.91
PPARGC1A-204ENST00000506055 NUCB2P80303 420 aa9.35□□□□□ -0.91
PPARGC1A-204ENST00000506055 USHBP1Q8N6Y0 703 aa9.35□□□□□ -0.91
PPARGC1A-204ENST00000506055 IL17REQ8NFR9 667 aa9.35□□□□□ -0.91
PPARGC1A-204ENST00000506055 TBX22Q9Y458 520 aa9.35□□□□□ -0.91
PPARGC1A-204ENST00000506055 NALCNQ8IZF0 1738 aa9.34□□□□□ -0.91
PPARGC1A-204ENST00000506055 HOXC9P31274 260 aa9.34□□□□□ -0.91
PPARGC1A-204ENST00000506055 NEK4P51957 841 aa9.34□□□□□ -0.91
PPARGC1A-204ENST00000506055 CLEC17AQ6ZS10 378 aa9.34□□□□□ -0.91
PPARGC1A-204ENST00000506055 OSBPL3Q9H4L5 887 aa9.34□□□□□ -0.91
PPARGC1A-204ENST00000506055 LRRFIP2Q9Y608 721 aaKnown RBP9.34□□□□□ -0.91
PPARGC1A-204ENST00000506055 AK9Q5TCS8 1911 aa9.34□□□□□ -0.91
PPARGC1A-204ENST00000506055 MX1P20591 662 aa9.34□□□□□ -0.91
PPARGC1A-204ENST00000506055 HTATSF1O43719 755 aaKnown RBP9.33□□□□□ -0.92
PPARGC1A-204ENST00000506055 ATP8B2P98198 1209 aa9.33□□□□□ -0.92
PPARGC1A-204ENST00000506055 TAF7Q15545 349 aaPredicted RBP9.33□□□□□ -0.92
PPARGC1A-204ENST00000506055 KLHL40Q2TBA0 621 aa9.33□□□□□ -0.92
PPARGC1A-204ENST00000506055 FOXD4L5Q5VV16 416 aaPredicted RBP9.33□□□□□ -0.92
PPARGC1A-204ENST00000506055 FOXD4L4Q8WXT5 416 aaPredicted RBP9.33□□□□□ -0.92
PPARGC1A-204ENST00000506055 TRIM44Q96DX7 344 aaPredicted RBP9.33□□□□□ -0.92
PPARGC1A-204ENST00000506055 CWC22Q9HCG8 908 aaKnown RBP9.33□□□□□ -0.92
PPARGC1A-204ENST00000506055 PHAXQ9H814 394 aaKnown RBP9.33□□□□□ -0.92
PPARGC1A-204ENST00000506055 KIF13AQ9H1H9 1805 aa9.32□□□□□ -0.92
PPARGC1A-204ENST00000506055 RGPD8O14715 1765 aaPredicted RBP9.32□□□□□ -0.92
PPARGC1A-204ENST00000506055 ZBTB7CA1YPR0 619 aa9.32□□□□□ -0.92
PPARGC1A-204ENST00000506055 PRPF40AO75400 957 aaKnown RBP9.32□□□□□ -0.92
PPARGC1A-204ENST00000506055 KCNA6P17658 529 aa9.32□□□□□ -0.92
PPARGC1A-204ENST00000506055 EIF2S2P20042 333 aaKnown RBP9.32□□□□□ -0.92
PPARGC1A-204ENST00000506055 CAVIN1Q6NZI2 390 aaKnown RBP9.32□□□□□ -0.92
PPARGC1A-204ENST00000506055 NOL8Q76FK4 1167 aaKnown RBP9.32□□□□□ -0.92
PPARGC1A-204ENST00000506055 THEMISQ8N1K5 641 aaPredicted RBP9.32□□□□□ -0.92
PPARGC1A-204ENST00000506055 USP44Q9H0E7 712 aa9.32□□□□□ -0.92
PPARGC1A-204ENST00000506055 IL1RAPL2Q9NP60 686 aa9.32□□□□□ -0.92
PPARGC1A-204ENST00000506055 ANO2Q9NQ90 1003 aa9.32□□□□□ -0.92
PPARGC1A-204ENST00000506055 UBTFL1P0CB47 393 aaPredicted RBP9.32□□□□□ -0.92
PPARGC1A-204ENST00000506055 HDGFL1Q5TGJ6 251 aa9.32□□□□□ -0.92
PPARGC1A-204ENST00000506055 RBM33Q96EV2 1170 aaKnown RBP9.32□□□□□ -0.92
PPARGC1A-204ENST00000506055 CHAMP1Q96JM3 812 aa9.32□□□□□ -0.92
PPARGC1A-204ENST00000506055 ESYT1Q9BSJ8 1104 aa9.32□□□□□ -0.92
PPARGC1A-204ENST00000506055 FMN2Q9NZ56 1722 aa9.31□□□□□ -0.92
PPARGC1A-204ENST00000506055 PLEKHG5O94827 1062 aa9.31□□□□□ -0.92
PPARGC1A-204ENST00000506055 CYP2E1P05181 493 aaPredicted RBP9.31□□□□□ -0.92
PPARGC1A-204ENST00000506055 LMBRD1Q9NUN5 540 aa9.31□□□□□ -0.92
PPARGC1A-204ENST00000506055 DIP2AQ14689 1571 aa9.31□□□□□ -0.92
PPARGC1A-204ENST00000506055 MAP3K5Q99683 1374 aa9.31□□□□□ -0.92
PPARGC1A-204ENST00000506055 CHMLP26374 656 aa9.31□□□□□ -0.92
PPARGC1A-204ENST00000506055 CLCN1P35523 988 aa9.31□□□□□ -0.92
PPARGC1A-204ENST00000506055 NASPP49321 788 aaPredicted RBP9.31□□□□□ -0.92
PPARGC1A-204ENST00000506055 NUTM1Q86Y26 1132 aa9.31□□□□□ -0.92
PPARGC1A-204ENST00000506055 UNC5CLQ8IV45 518 aa9.31□□□□□ -0.92
PPARGC1A-204ENST00000506055 PALD1Q9ULE6 856 aa9.31□□□□□ -0.92
PPARGC1A-204ENST00000506055 ZDHHC9Q9Y397 364 aa9.31□□□□□ -0.92
PPARGC1A-204ENST00000506055 SALL3Q9BXA9 1300 aa9.31□□□□□ -0.92
PPARGC1A-204ENST00000506055 PIK3C2AO00443 1686 aa9.3□□□□□ -0.92
PPARGC1A-204ENST00000506055 ESPNB1AK53 854 aa9.3□□□□□ -0.92
PPARGC1A-204ENST00000506055 MAP4K4O95819 1239 aaPredicted RBP9.3□□□□□ -0.92
PPARGC1A-204ENST00000506055 TMX3Q96JJ7 454 aa9.3□□□□□ -0.92
PPARGC1A-204ENST00000506055 IBTKQ9P2D0 1353 aaPredicted RBP9.3□□□□□ -0.92
PPARGC1A-204ENST00000506055 MCCP23508 829 aa9.3□□□□□ -0.92
PPARGC1A-204ENST00000506055 ZSCAN23Q3MJ62 389 aa9.3□□□□□ -0.92
PPARGC1A-204ENST00000506055 ERBB4Q15303 1308 aa9.3□□□□□ -0.92
PPARGC1A-204ENST00000506055 SURF6O75683 361 aaKnown RBP9.29□□□□□ -0.92
PPARGC1A-204ENST00000506055 ANP32BQ92688 251 aaKnown RBP9.29□□□□□ -0.92
PPARGC1A-204ENST00000506055 NAP1L5Q96NT1 182 aaPredicted RBP9.29□□□□□ -0.92
PPARGC1A-204ENST00000506055 LGR6Q9HBX8 967 aa9.29□□□□□ -0.92
PPARGC1A-204ENST00000506055 PPP1R42Q7Z4L9 355 aa9.29□□□□□ -0.92
PPARGC1A-204ENST00000506055 UPF3BQ9BZI7 483 aaKnown RBP9.29□□□□□ -0.92
PPARGC1A-204ENST00000506055 SRCIN1Q9C0H9 1055 aa9.29□□□□□ -0.92
PPARGC1A-204ENST00000506055 NBPF7P0C2Y1 421 aaPredicted RBP9.28□□□□□ -0.92
PPARGC1A-204ENST00000506055 GPT2Q8TD30 523 aa9.28□□□□□ -0.92
PPARGC1A-204ENST00000506055 RBM27Q9P2N5 1060 aaKnown RBP9.28□□□□□ -0.92
PPARGC1A-204ENST00000506055 STAP2Q9UGK3 403 aa9.28□□□□□ -0.92
PPARGC1A-204ENST00000506055 SRGAP3O43295 1099 aa9.28□□□□□ -0.92
PPARGC1A-204ENST00000506055 NBPF6Q5VWK0 638 aa9.28□□□□□ -0.92
PPARGC1A-204ENST00000506055 NBPF4Q96M43 638 aa9.28□□□□□ -0.92
PPARGC1A-204ENST00000506055 SOS1Q07889 1333 aaPredicted RBP9.27□□□□□ -0.92
PPARGC1A-204ENST00000506055 KCNQ3O43525 872 aa9.27□□□□□ -0.93
PPARGC1A-204ENST00000506055 ANXA1P04083 346 aa9.27□□□□□ -0.93
PPARGC1A-204ENST00000506055 FOXD4L6Q3SYB3 417 aaPredicted RBP9.27□□□□□ -0.93
PPARGC1A-204ENST00000506055 FOXD4L3Q6VB84 417 aaPredicted RBP9.27□□□□□ -0.93
PPARGC1A-204ENST00000506055 SSH3Q8TE77 659 aa9.27□□□□□ -0.93
PPARGC1A-204ENST00000506055 IL25Q9H293 177 aa9.27□□□□□ -0.93
PPARGC1A-204ENST00000506055 BABAM1Q9NWV8 329 aa9.27□□□□□ -0.93
PPARGC1A-204ENST00000506055 CHPF2Q9P2E5 772 aa9.27□□□□□ -0.93
PPARGC1A-204ENST00000506055 SLIT1O75093 1534 aa9.27□□□□□ -0.93
PPARGC1A-204ENST00000506055 PI4KAP2A4QPH2 592 aa9.27□□□□□ -0.93
PPARGC1A-204ENST00000506055 MCM2P49736 904 aa9.27□□□□□ -0.93
PPARGC1A-204ENST00000506055 CCDC173Q0VFZ6 552 aa9.27□□□□□ -0.93
PPARGC1A-204ENST00000506055 PI4KAP1Q8N8J0 262 aa9.27□□□□□ -0.93
PPARGC1A-204ENST00000506055 PHF8Q9UPP1 1060 aa9.27□□□□□ -0.93
PPARGC1A-204ENST00000506055 ARHGAP23Q9P227 1491 aa9.27□□□□□ -0.93
PPARGC1A-204ENST00000506055 PRIM1P49642 420 aaKnown RBP9.26□□□□□ -0.93
PPARGC1A-204ENST00000506055 ZNF445P59923 1031 aa9.26□□□□□ -0.93
PPARGC1A-204ENST00000506055 EIF4A1P60842 406 aaKnown RBP9.26□□□□□ -0.93
PPARGC1A-204ENST00000506055 PSME1Q06323 249 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms