RNA–Protein interactions for RNA: ENST00000505690.1

SPOCK1-204, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 2

Gene SPOCK1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-204ENST00000505690 MCM10Q7L590 875 aa30.23■■■□□ 2.43
SPOCK1-204ENST00000505690 FAM9BQ8IZU0 186 aa30.23■■■□□ 2.43
SPOCK1-204ENST00000505690 SMARCC1Q92922 1105 aaPredicted RBP30.22■■■□□ 2.43
SPOCK1-204ENST00000505690 RRP7AQ9Y3A4 280 aaKnown RBP30.22■■■□□ 2.43
SPOCK1-204ENST00000505690 RREB1Q92766 1687 aa30.22■■■□□ 2.43
SPOCK1-204ENST00000505690 PALLDQ8WX93 1383 aa30.21■■■□□ 2.43
SPOCK1-204ENST00000505690 TEFQ10587 303 aa30.21■■■□□ 2.43
SPOCK1-204ENST00000505690 DCTN1Q14203 1278 aa30.21■■■□□ 2.43
SPOCK1-204ENST00000505690 TXNRD1Q16881 649 aa30.21■■■□□ 2.43
SPOCK1-204ENST00000505690 LY75O60449 1722 aa30.2■■■□□ 2.43
SPOCK1-204ENST00000505690 ASAP1Q9ULH1 1129 aa30.2■■■□□ 2.43
SPOCK1-204ENST00000505690 APAF1O14727 1248 aa30.19■■■□□ 2.42
SPOCK1-204ENST00000505690 NEUROD2Q15784 382 aa30.19■■■□□ 2.42
SPOCK1-204ENST00000505690 PROM2Q8N271 834 aa30.19■■■□□ 2.42
SPOCK1-204ENST00000505690 ATG3Q9NT62 314 aa30.19■■■□□ 2.42
SPOCK1-204ENST00000505690 LMOD3Q0VAK6 560 aa30.18■■■□□ 2.42
SPOCK1-204ENST00000505690 SIPA1L3O60292 1781 aaPredicted RBP30.18■■■□□ 2.42
SPOCK1-204ENST00000505690 NUP188Q5SRE5 1749 aa30.16■■■□□ 2.42
SPOCK1-204ENST00000505690 SLC27A3Q5K4L6 730 aa30.14■■■□□ 2.42
SPOCK1-204ENST00000505690 PAPPAQ13219 1627 aa30.14■■■□□ 2.41
SPOCK1-204ENST00000505690 THUMPD2Q9BTF0 503 aaKnown RBP30.13■■■□□ 2.41
SPOCK1-204ENST00000505690 CCNL1Q9UK58 526 aaPredicted RBP30.13■■■□□ 2.41
SPOCK1-204ENST00000505690 TRIM35Q9UPQ4 493 aa30.12■■■□□ 2.41
SPOCK1-204ENST00000505690 SLC39A6Q13433 755 aa30.11■■■□□ 2.41
SPOCK1-204ENST00000505690 LRRC4BQ9NT99 713 aa30.11■■■□□ 2.41
SPOCK1-204ENST00000505690 LOC102724428A0A0B4J2F2 783 aa30.1■■■□□ 2.41
SPOCK1-204ENST00000505690 SIK1P57059 783 aa30.1■■■□□ 2.41
SPOCK1-204ENST00000505690 BTBD11A6QL63 1104 aa30.09■■■□□ 2.41
SPOCK1-204ENST00000505690 KCNQ4P56696 695 aa30.09■■■□□ 2.41
SPOCK1-204ENST00000505690 TAF7Q15545 349 aaPredicted RBP30.08■■■□□ 2.41
SPOCK1-204ENST00000505690 RBM42Q9BTD8 480 aaKnown RBP30.08■■■□□ 2.41
SPOCK1-204ENST00000505690 TTC5Q8N0Z6 440 aa30.07■■■□□ 2.4
SPOCK1-204ENST00000505690 SENP3-EIF4A1A0A087X0R7 540 aa30.06■■■□□ 2.4
SPOCK1-204ENST00000505690 PTCD1O75127 700 aaKnown RBP30.06■■■□□ 2.4
SPOCK1-204ENST00000505690 ZNF790Q6PG37 636 aa30.06■■■□□ 2.4
SPOCK1-204ENST00000505690 NBPF14Q5TI25 921 aa30.05■■■□□ 2.4
SPOCK1-204ENST00000505690 KCPQ6ZWJ8 1503 aa30.05■■■□□ 2.4
SPOCK1-204ENST00000505690 UBR2Q8IWV8 1755 aa30.05■■■□□ 2.4
SPOCK1-204ENST00000505690 ATP6V1AP38606 617 aa30.04■■■□□ 2.4
SPOCK1-204ENST00000505690 ZNF831Q5JPB2 1677 aa30.04■■■□□ 2.4
SPOCK1-204ENST00000505690 SLC4A9Q96Q91 983 aa30.03■■■□□ 2.4
SPOCK1-204ENST00000505690 C5P01031 1676 aa30.03■■■□□ 2.4
SPOCK1-204ENST00000505690 NCBP3Q53F19 620 aaKnown RBP30.02■■■□□ 2.4
SPOCK1-204ENST00000505690 TAF1LQ8IZX4 1826 aa30.01■■■□□ 2.4
SPOCK1-204ENST00000505690 KCNQ3O43525 872 aa30.01■■■□□ 2.39
SPOCK1-204ENST00000505690 HMGB2P26583 209 aaKnown RBP30.01■■■□□ 2.39
SPOCK1-204ENST00000505690 ITPK1Q13572 414 aa30.01■■■□□ 2.39
SPOCK1-204ENST00000505690 CCDC27Q2M243 656 aa30.01■■■□□ 2.39
SPOCK1-204ENST00000505690 ANO8Q9HCE9 1232 aaPredicted RBP30.01■■■□□ 2.39
SPOCK1-204ENST00000505690 MIS18AQ9NYP9 233 aa30.01■■■□□ 2.39
SPOCK1-204ENST00000505690 KDM3BQ7LBC6 1761 aa30■■■□□ 2.39
SPOCK1-204ENST00000505690 ZNF496Q96IT1 587 aaPredicted RBP29.99■■■□□ 2.39
SPOCK1-204ENST00000505690 STK32BQ9NY57 414 aa29.99■■■□□ 2.39
SPOCK1-204ENST00000505690 CICQ96RK0 1608 aaPredicted RBP29.98■■■□□ 2.39
SPOCK1-204ENST00000505690 FMNL2Q96PY5 1086 aa29.98■■■□□ 2.39
SPOCK1-204ENST00000505690 TJP1Q07157 1748 aa29.97■■■□□ 2.39
SPOCK1-204ENST00000505690 CALD1Q05682 793 aaKnown RBP29.97■■■□□ 2.39
SPOCK1-204ENST00000505690 VSIG10Q8N0Z9 540 aa29.97■■■□□ 2.39
SPOCK1-204ENST00000505690 LINC00116Q8NCU8 138 aa29.97■■■□□ 2.39
SPOCK1-204ENST00000505690 BABAM1Q9NWV8 329 aa29.97■■■□□ 2.39
SPOCK1-204ENST00000505690 SALL2Q9Y467 1007 aaPredicted RBP29.97■■■□□ 2.39
SPOCK1-204ENST00000505690 HEG1Q9ULI3 1381 aa29.96■■■□□ 2.39
SPOCK1-204ENST00000505690 SLC15A2Q16348 729 aa29.96■■■□□ 2.39
SPOCK1-204ENST00000505690 ZNF827Q17R98 1081 aa29.96■■■□□ 2.39
SPOCK1-204ENST00000505690 WWC1Q8IX03 1113 aa29.96■■■□□ 2.39
SPOCK1-204ENST00000505690 AKT1S1Q96B36 256 aa29.96■■■□□ 2.39
SPOCK1-204ENST00000505690 TSPYL4Q9UJ04 414 aa29.96■■■□□ 2.39
SPOCK1-204ENST00000505690 C4BP0C0L5 1744 aa29.96■■■□□ 2.39
SPOCK1-204ENST00000505690 NGEFQ8N5V2 710 aa29.95■■■□□ 2.39
SPOCK1-204ENST00000505690 COL5A3P25940 1745 aaPredicted RBP29.94■■■□□ 2.38
SPOCK1-204ENST00000505690 R3HDM1Q15032 1099 aaKnown RBP29.94■■■□□ 2.38
SPOCK1-204ENST00000505690 LAS1LQ9Y4W2 734 aaKnown RBP29.94■■■□□ 2.38
SPOCK1-204ENST00000505690 CHL1O00533 1208 aa29.93■■■□□ 2.38
SPOCK1-204ENST00000505690 DNAJC10Q8IXB1 793 aa29.93■■■□□ 2.38
SPOCK1-204ENST00000505690 CFAP44Q96MT7 982 aa29.92■■■□□ 2.38
SPOCK1-204ENST00000505690 PSDA5PKW4 1024 aaPredicted RBP29.91■■■□□ 2.38
SPOCK1-204ENST00000505690 EIF4A1P60842 406 aaKnown RBP29.9■■■□□ 2.38
SPOCK1-204ENST00000505690 AK7Q96M32 723 aa29.9■■■□□ 2.38
SPOCK1-204ENST00000505690 IFT57Q9NWB7 429 aa29.9■■■□□ 2.38
SPOCK1-204ENST00000505690 ZNF853P0CG23 659 aa29.89■■■□□ 2.38
SPOCK1-204ENST00000505690 GNAI1P63096 354 aa29.89■■■□□ 2.38
SPOCK1-204ENST00000505690 TFCP2L1Q9NZI6 479 aa29.89■■■□□ 2.38
SPOCK1-204ENST00000505690 CNTNAP4Q9C0A0 1308 aa29.89■■■□□ 2.38
SPOCK1-204ENST00000505690 TEX13AQ9BXU3 409 aaPredicted RBP29.88■■■□□ 2.37
SPOCK1-204ENST00000505690 SNRPA1P09661 255 aaKnown RBP29.87■■■□□ 2.37
SPOCK1-204ENST00000505690 RC3H1Q5TC82 1133 aaKnown RBP29.87■■■□□ 2.37
SPOCK1-204ENST00000505690 CYP19A1P11511 503 aaPredicted RBP29.86■■■□□ 2.37
SPOCK1-204ENST00000505690 WDR63Q8IWG1 891 aa29.86■■■□□ 2.37
SPOCK1-204ENST00000505690 TUBGCP6Q96RT7 1819 aa29.86■■■□□ 2.37
SPOCK1-204ENST00000505690 QSER1Q2KHR3 1735 aa29.85■■■□□ 2.37
SPOCK1-204ENST00000505690 CRKLP46109 303 aaKnown RBP29.85■■■□□ 2.37
SPOCK1-204ENST00000505690 MBIPQ9NS73 344 aa29.85■■■□□ 2.37
SPOCK1-204ENST00000505690 IL16Q14005 1332 aa29.85■■■□□ 2.37
SPOCK1-204ENST00000505690 PRAMEF22A3QJZ6 481 aa29.84■■■□□ 2.37
SPOCK1-204ENST00000505690 GNPATO15228 680 aa29.84■■■□□ 2.37
SPOCK1-204ENST00000505690 STARD3NLO95772 234 aa29.84■■■□□ 2.37
SPOCK1-204ENST00000505690 UBR3Q6ZT12 1888 aa29.82■■■□□ 2.37
SPOCK1-204ENST00000505690 PNPLA7Q6ZV29 1317 aa29.82■■■□□ 2.36
SPOCK1-204ENST00000505690 GIGYF1O75420 1035 aaPredicted RBP29.82■■■□□ 2.36
SPOCK1-204ENST00000505690 INTS5Q6P9B9 1019 aaKnown RBP29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms