RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 MMP14P50281 582 aa16.09■□□□□ 0.17
LETM1-203ENST00000505551 ZGPATQ8N5A5 531 aaKnown RBP16.09■□□□□ 0.17
LETM1-203ENST00000505551 SSH1Q8WYL5 1049 aa16.09■□□□□ 0.17
LETM1-203ENST00000505551 TNRQ92752 1358 aa16.08■□□□□ 0.17
LETM1-203ENST00000505551 CERS3Q8IU89 383 aa16.08■□□□□ 0.16
LETM1-203ENST00000505551 KCNJ4P48050 445 aa16.07■□□□□ 0.16
LETM1-203ENST00000505551 SYCP1Q15431 976 aa16.07■□□□□ 0.16
LETM1-203ENST00000505551 SYAP1Q96A49 352 aaPredicted RBP16.07■□□□□ 0.16
LETM1-203ENST00000505551 CHAMP1Q96JM3 812 aa16.07■□□□□ 0.16
LETM1-203ENST00000505551 CCDC66A2RUB6 948 aa16.07■□□□□ 0.16
LETM1-203ENST00000505551 CHAF1AQ13111 956 aaPredicted RBP16.07■□□□□ 0.16
LETM1-203ENST00000505551 GCC1Q96CN9 775 aa16.07■□□□□ 0.16
LETM1-203ENST00000505551 CTNNA3Q9UI47 895 aa16.07■□□□□ 0.16
LETM1-203ENST00000505551 MED14O60244 1454 aa16.06■□□□□ 0.16
LETM1-203ENST00000505551 ARHGEF40Q8TER5 1519 aa16.06■□□□□ 0.16
LETM1-203ENST00000505551 MPNDQ8N594 471 aa16.06■□□□□ 0.16
LETM1-203ENST00000505551 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.06■□□□□ 0.16
LETM1-203ENST00000505551 KIAA1524Q8TCG1 905 aa16.06■□□□□ 0.16
LETM1-203ENST00000505551 ZNF526Q8TF50 670 aaPredicted RBP16.06■□□□□ 0.16
LETM1-203ENST00000505551 DNAJC2Q99543 621 aaKnown RBP16.06■□□□□ 0.16
LETM1-203ENST00000505551 PRDM16Q9HAZ2 1276 aa16.06■□□□□ 0.16
LETM1-203ENST00000505551 NOB1Q9ULX3 412 aaKnown RBP16.06■□□□□ 0.16
LETM1-203ENST00000505551 ATAD2Q6PL18 1390 aa16.06■□□□□ 0.16
LETM1-203ENST00000505551 ANKRD45Q5TZF3 282 aa16.05■□□□□ 0.16
LETM1-203ENST00000505551 PUS7Q96PZ0 661 aaKnown RBP16.05■□□□□ 0.16
LETM1-203ENST00000505551 USP25Q9UHP3 1055 aa16.05■□□□□ 0.16
LETM1-203ENST00000505551 PPIP5K1Q6PFW1 1433 aa16.05■□□□□ 0.16
LETM1-203ENST00000505551 PHF14O94880 888 aa16.05■□□□□ 0.16
LETM1-203ENST00000505551 NCBP1Q09161 790 aaKnown RBP16.05■□□□□ 0.16
LETM1-203ENST00000505551 DDX41Q9UJV9 622 aaKnown RBP16.05■□□□□ 0.16
LETM1-203ENST00000505551 ABCC11Q96J66 1382 aa16.04■□□□□ 0.16
LETM1-203ENST00000505551 WASLO00401 505 aaPredicted RBP16.04■□□□□ 0.16
LETM1-203ENST00000505551 ADCY5O95622 1261 aa16.04■□□□□ 0.16
LETM1-203ENST00000505551 EXOSC9Q06265 439 aaKnown RBP16.04■□□□□ 0.16
LETM1-203ENST00000505551 NME9Q86XW9 330 aa16.04■□□□□ 0.16
LETM1-203ENST00000505551 SPATA31D1Q6ZQQ2 1576 aa16.04■□□□□ 0.16
LETM1-203ENST00000505551 PLCB2Q00722 1185 aa16.04■□□□□ 0.16
LETM1-203ENST00000505551 OS9Q13438 667 aaPredicted RBP16.04■□□□□ 0.16
LETM1-203ENST00000505551 TSR2Q969E8 191 aaKnown RBP16.04■□□□□ 0.16
LETM1-203ENST00000505551 USP26Q9BXU7 913 aa16.04■□□□□ 0.16
LETM1-203ENST00000505551 PSEN1P49768 467 aa16.03■□□□□ 0.16
LETM1-203ENST00000505551 NUDT16Q96DE0 195 aaKnown RBP16.03■□□□□ 0.16
LETM1-203ENST00000505551 TIGD1Q96MW7 591 aa16.03■□□□□ 0.16
LETM1-203ENST00000505551 HDGFP51858 240 aaKnown RBP16.03■□□□□ 0.16
LETM1-203ENST00000505551 MORC2Q9Y6X9 1032 aaPredicted RBP16.03■□□□□ 0.16
LETM1-203ENST00000505551 TULP2O00295 520 aa16.03■□□□□ 0.16
LETM1-203ENST00000505551 ST18O60284 1047 aa16.03■□□□□ 0.16
LETM1-203ENST00000505551 TERF2Q15554 542 aa16.02■□□□□ 0.16
LETM1-203ENST00000505551 AEBP1Q8IUX7 1158 aa16.02■□□□□ 0.16
LETM1-203ENST00000505551 CD163L1Q9NR16 1453 aa16.02■□□□□ 0.15
LETM1-203ENST00000505551 HMGB1P09429 215 aaKnown RBP16.02■□□□□ 0.15
LETM1-203ENST00000505551 BRD1O95696 1058 aa16.01■□□□□ 0.15
LETM1-203ENST00000505551 GSPT1P15170 499 aaKnown RBP16.01■□□□□ 0.15
LETM1-203ENST00000505551 ZNF622Q969S3 477 aaKnown RBP eCLIP16.01■□□□□ 0.15
LETM1-203ENST00000505551 IPO8O15397 1037 aaKnown RBP16.01■□□□□ 0.15
LETM1-203ENST00000505551 PSMD1Q99460 953 aa16.01■□□□□ 0.15
LETM1-203ENST00000505551 KCNF1Q9H3M0 494 aa16■□□□□ 0.15
LETM1-203ENST00000505551 PYCARDQ9ULZ3 195 aa16■□□□□ 0.15
LETM1-203ENST00000505551 EMILIN1Q9Y6C2 1016 aa16■□□□□ 0.15
LETM1-203ENST00000505551 TMEM2Q9UHN6 1383 aa16■□□□□ 0.15
LETM1-203ENST00000505551 HMOX1P09601 288 aa16■□□□□ 0.15
LETM1-203ENST00000505551 MCCP23508 829 aa16■□□□□ 0.15
LETM1-203ENST00000505551 RRS1Q15050 365 aaKnown RBP16■□□□□ 0.15
LETM1-203ENST00000505551 TPM3P06753 285 aa15.99■□□□□ 0.15
LETM1-203ENST00000505551 DIAPH1O60610 1272 aaKnown RBP15.98■□□□□ 0.15
LETM1-203ENST00000505551 RBM33Q96EV2 1170 aaKnown RBP15.98■□□□□ 0.15
LETM1-203ENST00000505551 ROBO2Q9HCK4 1378 aa15.98■□□□□ 0.15
LETM1-203ENST00000505551 CAPN2P17655 700 aa15.98■□□□□ 0.15
LETM1-203ENST00000505551 CALCOCO1Q9P1Z2 691 aa15.98■□□□□ 0.15
LETM1-203ENST00000505551 KDM4AO75164 1064 aa15.97■□□□□ 0.15
LETM1-203ENST00000505551 POLKQ9UBT6 870 aa15.97■□□□□ 0.15
LETM1-203ENST00000505551 USP32Q8NFA0 1604 aa15.97■□□□□ 0.15
LETM1-203ENST00000505551 KIF18AQ8NI77 898 aa15.97■□□□□ 0.15
LETM1-203ENST00000505551 EID1Q9Y6B2 187 aa15.97■□□□□ 0.15
LETM1-203ENST00000505551 CCDC61Q9Y6R9 512 aa15.96■□□□□ 0.15
LETM1-203ENST00000505551 NSD2O96028 1365 aa15.96■□□□□ 0.15
LETM1-203ENST00000505551 IL16Q14005 1332 aa15.96■□□□□ 0.15
LETM1-203ENST00000505551 PRR36Q9H6K5 1346 aa15.96■□□□□ 0.15
LETM1-203ENST00000505551 FOXD4L5Q5VV16 416 aaPredicted RBP15.96■□□□□ 0.15
LETM1-203ENST00000505551 FOXD4L4Q8WXT5 416 aaPredicted RBP15.96■□□□□ 0.15
LETM1-203ENST00000505551 ZBTB9Q96C00 473 aa15.96■□□□□ 0.15
LETM1-203ENST00000505551 ZBTB7BO15156 539 aaPredicted RBP15.96■□□□□ 0.14
LETM1-203ENST00000505551 CHMP4CQ96CF2 233 aa15.96■□□□□ 0.14
LETM1-203ENST00000505551 SMTNL1A8MU46 457 aa15.95■□□□□ 0.14
LETM1-203ENST00000505551 ALDH1L2Q3SY69 923 aa15.95■□□□□ 0.14
LETM1-203ENST00000505551 INTS3Q68E01 1043 aaKnown RBP15.95■□□□□ 0.14
LETM1-203ENST00000505551 PLEKHM2Q8IWE5 1019 aa15.95■□□□□ 0.14
LETM1-203ENST00000505551 KRT222Q8N1A0 295 aa15.95■□□□□ 0.14
LETM1-203ENST00000505551 AMOTL2Q9Y2J4 779 aa15.95■□□□□ 0.14
LETM1-203ENST00000505551 PIK3R4Q99570 1358 aa15.95■□□□□ 0.14
LETM1-203ENST00000505551 GADD45BO75293 160 aaPredicted RBP15.95■□□□□ 0.14
LETM1-203ENST00000505551 CCDC183Q5T5S1 534 aa15.95■□□□□ 0.14
LETM1-203ENST00000505551 TTC22Q5TAA0 569 aa15.95■□□□□ 0.14
LETM1-203ENST00000505551 CREBRFQ8IUR6 639 aa15.95■□□□□ 0.14
LETM1-203ENST00000505551 SIRT2Q8IXJ6 389 aa15.95■□□□□ 0.14
LETM1-203ENST00000505551 TSPYL1Q9H0U9 437 aa15.95■□□□□ 0.14
LETM1-203ENST00000505551 FAM53CQ9NYF3 392 aa15.95■□□□□ 0.14
LETM1-203ENST00000505551 HCLS1P14317 486 aaPredicted RBP15.94■□□□□ 0.14
LETM1-203ENST00000505551 TMPOP42166 694 aaKnown RBP15.94■□□□□ 0.14
LETM1-203ENST00000505551 PLEKHF1Q96S99 279 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms