RNA–Protein interactions for RNA: ENST00000505484.5

PRDM5-207, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best)

Gene PRDM5, Length 2,396 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-207ENST00000505484 TERF2IPQ9NYB0 399 aa19.24■□□□□ 0.67
PRDM5-207ENST00000505484 MINK1Q8N4C8 1332 aaPredicted RBP19.23■□□□□ 0.67
PRDM5-207ENST00000505484 OTUD7AQ8TE49 926 aaPredicted RBP19.23■□□□□ 0.67
PRDM5-207ENST00000505484 OSBPL3Q9H4L5 887 aa19.23■□□□□ 0.67
PRDM5-207ENST00000505484 ALKQ9UM73 1620 aa19.23■□□□□ 0.67
PRDM5-207ENST00000505484 RTL1A6NKG5 1358 aa19.23■□□□□ 0.67
PRDM5-207ENST00000505484 METP08581 1390 aa19.23■□□□□ 0.67
PRDM5-207ENST00000505484 CTIFO43310 598 aaKnown RBP19.22■□□□□ 0.67
PRDM5-207ENST00000505484 IL17RAQ96F46 866 aa19.22■□□□□ 0.67
PRDM5-207ENST00000505484 WDR33Q9C0J8 1336 aaKnown RBP19.22■□□□□ 0.67
PRDM5-207ENST00000505484 ATAD2Q6PL18 1390 aa19.22■□□□□ 0.67
PRDM5-207ENST00000505484 KIAA1524Q8TCG1 905 aa19.22■□□□□ 0.67
PRDM5-207ENST00000505484 MBIPQ9NS73 344 aa19.22■□□□□ 0.67
PRDM5-207ENST00000505484 UBR1Q8IWV7 1749 aa19.22■□□□□ 0.67
PRDM5-207ENST00000505484 TMEM2Q9UHN6 1383 aa19.22■□□□□ 0.67
PRDM5-207ENST00000505484 KDM4AO75164 1064 aa19.21■□□□□ 0.67
PRDM5-207ENST00000505484 USP48Q86UV5 1035 aa19.21■□□□□ 0.67
PRDM5-207ENST00000505484 TXNDC2Q86VQ3 553 aa19.21■□□□□ 0.67
PRDM5-207ENST00000505484 MCCP23508 829 aa19.21■□□□□ 0.67
PRDM5-207ENST00000505484 GADD45BO75293 160 aaPredicted RBP19.2■□□□□ 0.66
PRDM5-207ENST00000505484 MX1P20591 662 aa19.2■□□□□ 0.66
PRDM5-207ENST00000505484 CEP85Q6P2H3 762 aa19.2■□□□□ 0.66
PRDM5-207ENST00000505484 YTHDC2Q9H6S0 1430 aaKnown RBP19.19■□□□□ 0.66
PRDM5-207ENST00000505484 SYCP1Q15431 976 aa19.19■□□□□ 0.66
PRDM5-207ENST00000505484 C17orf53Q8N3J3 647 aaPredicted RBP19.19■□□□□ 0.66
PRDM5-207ENST00000505484 LMOD3Q0VAK6 560 aa19.18■□□□□ 0.66
PRDM5-207ENST00000505484 ZBTB7CA1YPR0 619 aa19.18■□□□□ 0.66
PRDM5-207ENST00000505484 RIOK3O14730 519 aaKnown RBP19.18■□□□□ 0.66
PRDM5-207ENST00000505484 OGFRQ9NZT2 677 aa19.18■□□□□ 0.66
PRDM5-207ENST00000505484 RGS12O14924 1447 aa19.17■□□□□ 0.66
PRDM5-207ENST00000505484 NRXN3Q9Y4C0 1643 aa19.17■□□□□ 0.66
PRDM5-207ENST00000505484 ELL2O00472 640 aaPredicted RBP19.17■□□□□ 0.66
PRDM5-207ENST00000505484 HCLS1P14317 486 aaPredicted RBP19.17■□□□□ 0.66
PRDM5-207ENST00000505484 SSH2Q76I76 1423 aa19.17■□□□□ 0.66
PRDM5-207ENST00000505484 MPNDQ8N594 471 aa19.17■□□□□ 0.66
PRDM5-207ENST00000505484 C8orf58Q8NAV2 365 aa19.17■□□□□ 0.66
PRDM5-207ENST00000505484 THUMPD2Q9BTF0 503 aaKnown RBP19.17■□□□□ 0.66
PRDM5-207ENST00000505484 CD163L1Q9NR16 1453 aa19.16■□□□□ 0.66
PRDM5-207ENST00000505484 SPDYE4A6NLX3 237 aa19.16■□□□□ 0.66
PRDM5-207ENST00000505484 FAM177BA6PVY3 158 aa19.15■□□□□ 0.66
PRDM5-207ENST00000505484 GOLGA6L6A8MZA4 724 aa19.15■□□□□ 0.66
PRDM5-207ENST00000505484 HAP1P54257 671 aaPredicted RBP19.15■□□□□ 0.66
PRDM5-207ENST00000505484 UBE2HP62256 183 aa19.15■□□□□ 0.66
PRDM5-207ENST00000505484 SRPK2P78362 688 aaKnown RBP19.15■□□□□ 0.66
PRDM5-207ENST00000505484 PHACTR3Q96KR7 559 aa19.15■□□□□ 0.66
PRDM5-207ENST00000505484 ESYT1Q9BSJ8 1104 aa19.15■□□□□ 0.66
PRDM5-207ENST00000505484 CPSF1Q10570 1443 aaKnown RBP19.15■□□□□ 0.66
PRDM5-207ENST00000505484 RPAP1Q9BWH6 1393 aaPredicted RBP19.15■□□□□ 0.66
PRDM5-207ENST00000505484 SMARCA5O60264 1052 aaPredicted RBP19.15■□□□□ 0.66
PRDM5-207ENST00000505484 PDE1AP54750 535 aa19.15■□□□□ 0.66
PRDM5-207ENST00000505484 GABPB1Q06547 395 aaPredicted RBP19.15■□□□□ 0.66
PRDM5-207ENST00000505484 EPB41L2O43491 1005 aaKnown RBP19.14■□□□□ 0.66
PRDM5-207ENST00000505484 U2AF2P26368 475 aaKnown RBP eCLIP19.14■□□□□ 0.66
PRDM5-207ENST00000505484 GDPD2Q9HCC8 539 aa19.14■□□□□ 0.66
PRDM5-207ENST00000505484 HMMRO75330 724 aa19.14■□□□□ 0.65
PRDM5-207ENST00000505484 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.14■□□□□ 0.65
PRDM5-207ENST00000505484 FUCA2Q9BTY2 467 aa19.14■□□□□ 0.65
PRDM5-207ENST00000505484 HDGFL2Q7Z4V5 671 aaPredicted RBP19.13■□□□□ 0.65
PRDM5-207ENST00000505484 KCNF1Q9H3M0 494 aa19.13■□□□□ 0.65
PRDM5-207ENST00000505484 PYCARDQ9ULZ3 195 aa19.12■□□□□ 0.65
PRDM5-207ENST00000505484 SRCIN1Q9C0H9 1055 aa19.12■□□□□ 0.65
PRDM5-207ENST00000505484 ADAMTSL3P82987 1691 aa19.11■□□□□ 0.65
PRDM5-207ENST00000505484 BBXQ8WY36 941 aaPredicted RBP19.11■□□□□ 0.65
PRDM5-207ENST00000505484 POLKQ9UBT6 870 aa19.11■□□□□ 0.65
PRDM5-207ENST00000505484 SETD1AO15047 1707 aaKnown RBP19.11■□□□□ 0.65
PRDM5-207ENST00000505484 NCKAP5LQ9HCH0 1330 aa19.1■□□□□ 0.65
PRDM5-207ENST00000505484 PALD1Q9ULE6 856 aa19.1■□□□□ 0.65
PRDM5-207ENST00000505484 PTPRCP08575 1304 aa19.1■□□□□ 0.65
PRDM5-207ENST00000505484 ADAMTS13Q76LX8 1427 aa19.1■□□□□ 0.65
PRDM5-207ENST00000505484 KIF20BQ96Q89 1820 aa19.1■□□□□ 0.65
PRDM5-207ENST00000505484 NUTM2FA1L443 756 aa19.1■□□□□ 0.65
PRDM5-207ENST00000505484 RBM33Q96EV2 1170 aaKnown RBP19.1■□□□□ 0.65
PRDM5-207ENST00000505484 ATP6V1DQ9Y5K8 247 aa19.1■□□□□ 0.65
PRDM5-207ENST00000505484 EID1Q9Y6B2 187 aa19.1■□□□□ 0.65
PRDM5-207ENST00000505484 GTF2E1P29083 439 aaPredicted RBP19.09■□□□□ 0.65
PRDM5-207ENST00000505484 THEMISQ8N1K5 641 aaPredicted RBP19.09■□□□□ 0.65
PRDM5-207ENST00000505484 ZSCAN22P10073 491 aaPredicted RBP19.08■□□□□ 0.65
PRDM5-207ENST00000505484 NCBP1Q09161 790 aaKnown RBP19.08■□□□□ 0.65
PRDM5-207ENST00000505484 MSH6P52701 1360 aa19.08■□□□□ 0.65
PRDM5-207ENST00000505484 KIAA0232Q92628 1395 aa19.08■□□□□ 0.65
PRDM5-207ENST00000505484 APBB1O00213 710 aa19.08■□□□□ 0.64
PRDM5-207ENST00000505484 ZNF771Q7L3S4 317 aaPredicted RBP19.08■□□□□ 0.64
PRDM5-207ENST00000505484 CTNNA3Q9UI47 895 aa19.08■□□□□ 0.64
PRDM5-207ENST00000505484 HMOX1P09601 288 aa19.07■□□□□ 0.64
PRDM5-207ENST00000505484 HDGFP51858 240 aaKnown RBP19.07■□□□□ 0.64
PRDM5-207ENST00000505484 FOXD4L6Q3SYB3 417 aaPredicted RBP19.07■□□□□ 0.64
PRDM5-207ENST00000505484 FOXD4L3Q6VB84 417 aaPredicted RBP19.07■□□□□ 0.64
PRDM5-207ENST00000505484 CGNQ9P2M7 1197 aaKnown RBP19.07■□□□□ 0.64
PRDM5-207ENST00000505484 CNPY2Q9Y2B0 182 aa19.07■□□□□ 0.64
PRDM5-207ENST00000505484 SALL3Q9BXA9 1300 aa19.07■□□□□ 0.64
PRDM5-207ENST00000505484 SMTNL1A8MU46 457 aa19.07■□□□□ 0.64
PRDM5-207ENST00000505484 CDK19Q9BWU1 502 aa19.07■□□□□ 0.64
PRDM5-207ENST00000505484 CHMLP26374 656 aa19.06■□□□□ 0.64
PRDM5-207ENST00000505484 MEIS3Q99687 375 aa19.06■□□□□ 0.64
PRDM5-207ENST00000505484 ANO2Q9NQ90 1003 aa19.06■□□□□ 0.64
PRDM5-207ENST00000505484 DDX41Q9UJV9 622 aaKnown RBP19.06■□□□□ 0.64
PRDM5-207ENST00000505484 AP5Z1O43299 807 aa19.06■□□□□ 0.64
PRDM5-207ENST00000505484 ROBO2Q9HCK4 1378 aa19.06■□□□□ 0.64
PRDM5-207ENST00000505484 IL13P35225 146 aa19.05■□□□□ 0.64
PRDM5-207ENST00000505484 NOL8Q76FK4 1167 aaKnown RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms