RNA–Protein interactions for RNA: ENST00000504956.5

AFF1-205, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 2

Gene AFF1, Length 1,668 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-205ENST00000504956 SLC52A2Q9HAB3 445 aa20.83■□□□□ 0.93
AFF1-205ENST00000504956 RGPD3A6NKT7 1758 aaPredicted RBP20.83■□□□□ 0.92
AFF1-205ENST00000504956 RGPD4Q7Z3J3 1758 aa20.83■□□□□ 0.92
AFF1-205ENST00000504956 LMOD3Q0VAK6 560 aa20.83■□□□□ 0.92
AFF1-205ENST00000504956 TEFQ10587 303 aa20.83■□□□□ 0.92
AFF1-205ENST00000504956 KDM3BQ7LBC6 1761 aa20.82■□□□□ 0.92
AFF1-205ENST00000504956 APBA3O96018 575 aa20.81■□□□□ 0.92
AFF1-205ENST00000504956 UBR2Q8IWV8 1755 aa20.8■□□□□ 0.92
AFF1-205ENST00000504956 SF3B2Q13435 895 aaKnown RBP20.8■□□□□ 0.92
AFF1-205ENST00000504956 CCDC125Q86Z20 511 aa20.77■□□□□ 0.92
AFF1-205ENST00000504956 ASAP1Q9ULH1 1129 aa20.77■□□□□ 0.92
AFF1-205ENST00000504956 RREB1Q92766 1687 aa20.77■□□□□ 0.92
AFF1-205ENST00000504956 DEFB132Q7Z7B7 95 aa20.77■□□□□ 0.91
AFF1-205ENST00000504956 TAF1LQ8IZX4 1826 aa20.76■□□□□ 0.91
AFF1-205ENST00000504956 PALLDQ8WX93 1383 aa20.76■□□□□ 0.91
AFF1-205ENST00000504956 SLC39A6Q13433 755 aa20.76■□□□□ 0.91
AFF1-205ENST00000504956 BAG6P46379 1132 aa20.75■□□□□ 0.91
AFF1-205ENST00000504956 EN1Q05925 392 aaPredicted RBP20.75■□□□□ 0.91
AFF1-205ENST00000504956 CCDC27Q2M243 656 aa20.75■□□□□ 0.91
AFF1-205ENST00000504956 WWC1Q8IX03 1113 aa20.75■□□□□ 0.91
AFF1-205ENST00000504956 ATG3Q9NT62 314 aa20.75■□□□□ 0.91
AFF1-205ENST00000504956 NUP188Q5SRE5 1749 aa20.74■□□□□ 0.91
AFF1-205ENST00000504956 BTBD11A6QL63 1104 aa20.74■□□□□ 0.91
AFF1-205ENST00000504956 TAF7Q15545 349 aaPredicted RBP20.74■□□□□ 0.91
AFF1-205ENST00000504956 MIS18AQ9NYP9 233 aa20.74■□□□□ 0.91
AFF1-205ENST00000504956 KCPQ6ZWJ8 1503 aa20.74■□□□□ 0.91
AFF1-205ENST00000504956 C5P01031 1676 aa20.73■□□□□ 0.91
AFF1-205ENST00000504956 LAS1LQ9Y4W2 734 aaKnown RBP20.73■□□□□ 0.91
AFF1-205ENST00000504956 TJP1Q07157 1748 aa20.73■□□□□ 0.91
AFF1-205ENST00000504956 PLSCR1O15162 318 aa20.72■□□□□ 0.91
AFF1-205ENST00000504956 HNRNPUQ00839 825 aaKnown RBP eCLIP20.72■□□□□ 0.91
AFF1-205ENST00000504956 EZH2Q15910 746 aaKnown RBP20.72■□□□□ 0.91
AFF1-205ENST00000504956 NCBP3Q53F19 620 aaKnown RBP20.72■□□□□ 0.91
AFF1-205ENST00000504956 SMARCC1Q92922 1105 aaPredicted RBP20.72■□□□□ 0.91
AFF1-205ENST00000504956 KCNQ3O43525 872 aa20.71■□□□□ 0.91
AFF1-205ENST00000504956 ZNF831Q5JPB2 1677 aa20.71■□□□□ 0.91
AFF1-205ENST00000504956 SOCS7O14512 581 aa20.7■□□□□ 0.91
AFF1-205ENST00000504956 PTCD1O75127 700 aaKnown RBP20.7■□□□□ 0.91
AFF1-205ENST00000504956 COL5A3P25940 1745 aaPredicted RBP20.7■□□□□ 0.91
AFF1-205ENST00000504956 ZNF790Q6PG37 636 aa20.7■□□□□ 0.91
AFF1-205ENST00000504956 TTC5Q8N0Z6 440 aa20.7■□□□□ 0.91
AFF1-205ENST00000504956 CAMKK2Q96RR4 588 aa20.7■□□□□ 0.91
AFF1-205ENST00000504956 RBM42Q9BTD8 480 aaKnown RBP20.7■□□□□ 0.91
AFF1-205ENST00000504956 KCNQ4P56696 695 aa20.7■□□□□ 0.9
AFF1-205ENST00000504956 NGEFQ8N5V2 710 aa20.7■□□□□ 0.9
AFF1-205ENST00000504956 TSPYL4Q9UJ04 414 aa20.7■□□□□ 0.9
AFF1-205ENST00000504956 CALD1Q05682 793 aaKnown RBP20.69■□□□□ 0.9
AFF1-205ENST00000504956 CICQ96RK0 1608 aaPredicted RBP20.69■□□□□ 0.9
AFF1-205ENST00000504956 TXNRD1Q16881 649 aa20.68■□□□□ 0.9
AFF1-205ENST00000504956 ZNF521Q96K83 1311 aa20.68■□□□□ 0.9
AFF1-205ENST00000504956 LOC102724428A0A0B4J2F2 783 aa20.67■□□□□ 0.9
AFF1-205ENST00000504956 SIK1P57059 783 aa20.67■□□□□ 0.9
AFF1-205ENST00000504956 PROM2Q8N271 834 aa20.67■□□□□ 0.9
AFF1-205ENST00000504956 CCNL1Q9UK58 526 aaPredicted RBP20.67■□□□□ 0.9
AFF1-205ENST00000504956 LAMB4A4D0S4 1761 aa20.67■□□□□ 0.9
AFF1-205ENST00000504956 CFAP44Q96MT7 982 aa20.67■□□□□ 0.9
AFF1-205ENST00000504956 SLC4A9Q96Q91 983 aa20.67■□□□□ 0.9
AFF1-205ENST00000504956 IFT57Q9NWB7 429 aa20.67■□□□□ 0.9
AFF1-205ENST00000504956 WDR63Q8IWG1 891 aa20.66■□□□□ 0.9
AFF1-205ENST00000504956 ZNF496Q96IT1 587 aaPredicted RBP20.66■□□□□ 0.9
AFF1-205ENST00000504956 LRRC4BQ9NT99 713 aa20.66■□□□□ 0.9
AFF1-205ENST00000504956 CHL1O00533 1208 aa20.65■□□□□ 0.9
AFF1-205ENST00000504956 ZNF853P0CG23 659 aa20.65■□□□□ 0.9
AFF1-205ENST00000504956 ATP6V1AP38606 617 aa20.65■□□□□ 0.9
AFF1-205ENST00000504956 GNAI1P63096 354 aa20.65■□□□□ 0.9
AFF1-205ENST00000504956 MBIPQ9NS73 344 aa20.65■□□□□ 0.9
AFF1-205ENST00000504956 TUBGCP6Q96RT7 1819 aa20.65■□□□□ 0.9
AFF1-205ENST00000504956 MYH14Q7Z406 1995 aaKnown RBP20.65■□□□□ 0.9
AFF1-205ENST00000504956 C4BP0C0L5 1744 aa20.64■□□□□ 0.9
AFF1-205ENST00000504956 IL16Q14005 1332 aa20.64■□□□□ 0.89
AFF1-205ENST00000504956 TSR2Q969E8 191 aaKnown RBP20.64■□□□□ 0.89
AFF1-205ENST00000504956 FMNL2Q96PY5 1086 aa20.64■□□□□ 0.89
AFF1-205ENST00000504956 SPINK5Q9NQ38 1064 aaPredicted RBP20.64■□□□□ 0.89
AFF1-205ENST00000504956 BABAM1Q9NWV8 329 aa20.64■□□□□ 0.89
AFF1-205ENST00000504956 HEG1Q9ULI3 1381 aa20.63■□□□□ 0.89
AFF1-205ENST00000504956 ITPK1Q13572 414 aa20.63■□□□□ 0.89
AFF1-205ENST00000504956 SLC27A3Q5K4L6 730 aa20.63■□□□□ 0.89
AFF1-205ENST00000504956 EIF4A1P60842 406 aaKnown RBP20.62■□□□□ 0.89
AFF1-205ENST00000504956 PRAMEF22A3QJZ6 481 aa20.61■□□□□ 0.89
AFF1-205ENST00000504956 KRT24Q2M2I5 525 aa20.61■□□□□ 0.89
AFF1-205ENST00000504956 YTHDC1Q96MU7 727 aaKnown RBP20.61■□□□□ 0.89
AFF1-205ENST00000504956 UBR3Q6ZT12 1888 aa20.6■□□□□ 0.89
AFF1-205ENST00000504956 GOLGA2Q08379 1002 aa20.6■□□□□ 0.89
AFF1-205ENST00000504956 DNAJC10Q8IXB1 793 aa20.6■□□□□ 0.89
AFF1-205ENST00000504956 LINC00116Q8NCU8 138 aa20.6■□□□□ 0.89
AFF1-205ENST00000504956 FANCIQ9NVI1 1328 aa20.6■□□□□ 0.89
AFF1-205ENST00000504956 CDCA7LQ96GN5 454 aa20.59■□□□□ 0.89
AFF1-205ENST00000504956 ZBED9Q6R2W3 1325 aa20.59■□□□□ 0.89
AFF1-205ENST00000504956 VSIG10Q8N0Z9 540 aa20.58■□□□□ 0.89
AFF1-205ENST00000504956 SNRPA1P09661 255 aaKnown RBP20.57■□□□□ 0.88
AFF1-205ENST00000504956 MYH16Q9H6N6 1097 aa20.57■□□□□ 0.88
AFF1-205ENST00000504956 ANO8Q9HCE9 1232 aaPredicted RBP20.57■□□□□ 0.88
AFF1-205ENST00000504956 QSER1Q2KHR3 1735 aa20.56■□□□□ 0.88
AFF1-205ENST00000504956 E9PSI1 815 aa20.55■□□□□ 0.88
AFF1-205ENST00000504956 GIGYF1O75420 1035 aaPredicted RBP20.55■□□□□ 0.88
AFF1-205ENST00000504956 SLFN5Q08AF3 891 aa20.54■□□□□ 0.88
AFF1-205ENST00000504956 ZNF827Q17R98 1081 aa20.54■□□□□ 0.88
AFF1-205ENST00000504956 USP16Q9Y5T5 823 aa20.54■□□□□ 0.88
AFF1-205ENST00000504956 ELL2O00472 640 aaPredicted RBP20.54■□□□□ 0.88
AFF1-205ENST00000504956 CYP19A1P11511 503 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms