RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 LY75O60449 1722 aa26.87■■□□□ 1.89
HERC6-205ENST00000504905 PIGBQ92521 554 aa26.87■■□□□ 1.89
HERC6-205ENST00000504905 PHACTR3Q96KR7 559 aa26.87■■□□□ 1.89
HERC6-205ENST00000504905 NEFMP07197 916 aa26.85■■□□□ 1.89
HERC6-205ENST00000504905 SLC16A10Q8TF71 515 aa26.85■■□□□ 1.89
HERC6-205ENST00000504905 AKT1S1Q96B36 256 aa26.85■■□□□ 1.89
HERC6-205ENST00000504905 CABP4P57796 275 aa26.84■■□□□ 1.89
HERC6-205ENST00000504905 SLC27A3Q5K4L6 730 aa26.84■■□□□ 1.89
HERC6-205ENST00000504905 PNNQ9H307 717 aaKnown RBP26.84■■□□□ 1.89
HERC6-205ENST00000504905 SMARCC1Q92922 1105 aaPredicted RBP26.83■■□□□ 1.89
HERC6-205ENST00000504905 QSER1Q2KHR3 1735 aa26.82■■□□□ 1.88
HERC6-205ENST00000504905 PALLDQ8WX93 1383 aa26.82■■□□□ 1.88
HERC6-205ENST00000504905 GNAT3A8MTJ3 354 aa26.81■■□□□ 1.88
HERC6-205ENST00000504905 RNMTO43148 476 aaKnown RBP26.81■■□□□ 1.88
HERC6-205ENST00000504905 WDR43Q15061 677 aaKnown RBP eCLIP26.81■■□□□ 1.88
HERC6-205ENST00000504905 ADAMTS7Q9UKP4 1686 aa26.81■■□□□ 1.88
HERC6-205ENST00000504905 COL24A1Q17RW2 1714 aa26.8■■□□□ 1.88
HERC6-205ENST00000504905 LGR6Q9HBX8 967 aa26.8■■□□□ 1.88
HERC6-205ENST00000504905 C1QTNF8P60827 252 aa26.78■■□□□ 1.88
HERC6-205ENST00000504905 NFATC2IPQ8NCF5 419 aa26.78■■□□□ 1.88
HERC6-205ENST00000504905 PLEKHF1Q96S99 279 aa26.78■■□□□ 1.88
HERC6-205ENST00000504905 CCNL1Q9UK58 526 aaPredicted RBP26.78■■□□□ 1.88
HERC6-205ENST00000504905 ASAP1Q9ULH1 1129 aa26.78■■□□□ 1.88
HERC6-205ENST00000504905 MAPK8IP3Q9UPT6 1336 aa26.78■■□□□ 1.88
HERC6-205ENST00000504905 PNPLA7Q6ZV29 1317 aa26.77■■□□□ 1.88
HERC6-205ENST00000504905 GPR162Q16538 588 aa26.77■■□□□ 1.88
HERC6-205ENST00000504905 MRC1P22897 1456 aa26.76■■□□□ 1.87
HERC6-205ENST00000504905 POLD1P28340 1107 aa26.76■■□□□ 1.87
HERC6-205ENST00000504905 SLC52A2Q9HAB3 445 aa26.76■■□□□ 1.87
HERC6-205ENST00000504905 DLG5Q8TDM6 1919 aa26.75■■□□□ 1.87
HERC6-205ENST00000504905 KCNQ4P56696 695 aa26.75■■□□□ 1.87
HERC6-205ENST00000504905 ATG3Q9NT62 314 aa26.75■■□□□ 1.87
HERC6-205ENST00000504905 SENP3-EIF4A1A0A087X0R7 540 aa26.73■■□□□ 1.87
HERC6-205ENST00000504905 IL17REQ8NFR9 667 aa26.73■■□□□ 1.87
HERC6-205ENST00000504905 RTF1Q92541 710 aaKnown RBP26.73■■□□□ 1.87
HERC6-205ENST00000504905 TFCP2L1Q9NZI6 479 aa26.73■■□□□ 1.87
HERC6-205ENST00000504905 C5P01031 1676 aa26.73■■□□□ 1.87
HERC6-205ENST00000504905 TAF1LQ8IZX4 1826 aa26.72■■□□□ 1.87
HERC6-205ENST00000504905 ADAMTS8Q9UP79 889 aa26.72■■□□□ 1.87
HERC6-205ENST00000504905 LOC102724428A0A0B4J2F2 783 aa26.71■■□□□ 1.87
HERC6-205ENST00000504905 SIK1P57059 783 aa26.71■■□□□ 1.87
HERC6-205ENST00000504905 TEFQ10587 303 aa26.71■■□□□ 1.87
HERC6-205ENST00000504905 NFE2L2Q16236 605 aa26.71■■□□□ 1.87
HERC6-205ENST00000504905 TUBGCP6Q96RT7 1819 aa26.7■■□□□ 1.87
HERC6-205ENST00000504905 HMGB2P26583 209 aaKnown RBP26.7■■□□□ 1.86
HERC6-205ENST00000504905 CCDC184Q52MB2 194 aa26.7■■□□□ 1.86
HERC6-205ENST00000504905 KLHL34Q8N239 644 aa26.7■■□□□ 1.86
HERC6-205ENST00000504905 SIPA1L3O60292 1781 aaPredicted RBP26.7■■□□□ 1.86
HERC6-205ENST00000504905 HTATSF1O43719 755 aaKnown RBP26.69■■□□□ 1.86
HERC6-205ENST00000504905 CCDC146Q8IYE0 955 aa26.69■■□□□ 1.86
HERC6-205ENST00000504905 MRS2Q9HD23 443 aa26.69■■□□□ 1.86
HERC6-205ENST00000504905 GOLGB1Q14789 3259 aaKnown RBP26.69■■□□□ 1.86
HERC6-205ENST00000504905 CEMIPQ8WUJ3 1361 aa26.69■■□□□ 1.86
HERC6-205ENST00000504905 RBM42Q9BTD8 480 aaKnown RBP26.68■■□□□ 1.86
HERC6-205ENST00000504905 MCM10Q7L590 875 aa26.67■■□□□ 1.86
HERC6-205ENST00000504905 RUNDC1Q96C34 613 aa26.67■■□□□ 1.86
HERC6-205ENST00000504905 ATP6V1AP38606 617 aa26.66■■□□□ 1.86
HERC6-205ENST00000504905 ZNF831Q5JPB2 1677 aa26.66■■□□□ 1.86
HERC6-205ENST00000504905 DCTN1Q14203 1278 aa26.65■■□□□ 1.86
HERC6-205ENST00000504905 NLGN2Q8NFZ4 835 aa26.65■■□□□ 1.86
HERC6-205ENST00000504905 PTCD1O75127 700 aaKnown RBP26.64■■□□□ 1.86
HERC6-205ENST00000504905 SLC39A6Q13433 755 aa26.64■■□□□ 1.86
HERC6-205ENST00000504905 C4BP0C0L5 1744 aa26.64■■□□□ 1.85
HERC6-205ENST00000504905 PELP1Q8IZL8 1130 aaKnown RBP26.63■■□□□ 1.85
HERC6-205ENST00000504905 GIGYF1O75420 1035 aaPredicted RBP26.62■■□□□ 1.85
HERC6-205ENST00000504905 TMPOP42166 694 aaKnown RBP26.62■■□□□ 1.85
HERC6-205ENST00000504905 ITPK1Q13572 414 aa26.62■■□□□ 1.85
HERC6-205ENST00000504905 UBR2Q8IWV8 1755 aa26.61■■□□□ 1.85
HERC6-205ENST00000504905 RIPK4P57078 832 aa26.61■■□□□ 1.85
HERC6-205ENST00000504905 TTC5Q8N0Z6 440 aa26.61■■□□□ 1.85
HERC6-205ENST00000504905 SLC4A9Q96Q91 983 aa26.61■■□□□ 1.85
HERC6-205ENST00000504905 COL23A1Q86Y22 540 aaPredicted RBP26.6■■□□□ 1.85
HERC6-205ENST00000504905 LINC00116Q8NCU8 138 aa26.6■■□□□ 1.85
HERC6-205ENST00000504905 BTBD11A6QL63 1104 aa26.59■■□□□ 1.85
HERC6-205ENST00000504905 GRIN3BO60391 1043 aa26.59■■□□□ 1.85
HERC6-205ENST00000504905 PNISRQ8TF01 805 aaKnown RBP26.59■■□□□ 1.85
HERC6-205ENST00000504905 RRP7AQ9Y3A4 280 aaKnown RBP26.59■■□□□ 1.85
HERC6-205ENST00000504905 KCPQ6ZWJ8 1503 aa26.59■■□□□ 1.85
HERC6-205ENST00000504905 COL5A3P25940 1745 aaPredicted RBP26.59■■□□□ 1.85
HERC6-205ENST00000504905 LMOD3Q0VAK6 560 aa26.58■■□□□ 1.85
HERC6-205ENST00000504905 NEUROD2Q15784 382 aa26.58■■□□□ 1.85
HERC6-205ENST00000504905 AK7Q96M32 723 aa26.58■■□□□ 1.85
HERC6-205ENST00000504905 TJP1Q07157 1748 aa26.58■■□□□ 1.85
HERC6-205ENST00000504905 CICQ96RK0 1608 aaPredicted RBP26.57■■□□□ 1.84
HERC6-205ENST00000504905 YBX3P16989 372 aaKnown RBP eCLIP26.57■■□□□ 1.84
HERC6-205ENST00000504905 ZNF790Q6PG37 636 aa26.57■■□□□ 1.84
HERC6-205ENST00000504905 MSH5O43196 834 aa26.56■■□□□ 1.84
HERC6-205ENST00000504905 UBR3Q6ZT12 1888 aa26.55■■□□□ 1.84
HERC6-205ENST00000504905 TAF7Q15545 349 aaPredicted RBP26.55■■□□□ 1.84
HERC6-205ENST00000504905 THUMPD2Q9BTF0 503 aaKnown RBP26.55■■□□□ 1.84
HERC6-205ENST00000504905 APAF1O14727 1248 aa26.52■■□□□ 1.84
HERC6-205ENST00000504905 VSIG10Q8N0Z9 540 aa26.52■■□□□ 1.84
HERC6-205ENST00000504905 CNTNAP4Q9C0A0 1308 aa26.51■■□□□ 1.83
HERC6-205ENST00000504905 GNPATO15228 680 aa26.51■■□□□ 1.83
HERC6-205ENST00000504905 KCNQ3O43525 872 aa26.51■■□□□ 1.83
HERC6-205ENST00000504905 DIEXFQ68CQ4 756 aaKnown RBP26.51■■□□□ 1.83
HERC6-205ENST00000504905 DNAJC10Q8IXB1 793 aa26.51■■□□□ 1.83
HERC6-205ENST00000504905 FLAD1Q8NFF5 587 aa26.51■■□□□ 1.83
HERC6-205ENST00000504905 ZNF496Q96IT1 587 aaPredicted RBP26.51■■□□□ 1.83
HERC6-205ENST00000504905 FMNL2Q96PY5 1086 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms