RNA–Protein interactions for RNA: ENST00000504679.5

DDR1-254, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 460 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-254ENST00000504679 DCTN1Q14203 1278 aa23.92■■□□□ 1.42
DDR1-254ENST00000504679 DLG5Q8TDM6 1919 aa23.92■■□□□ 1.42
DDR1-254ENST00000504679 VIRMAQ69YN4 1812 aaKnown RBP23.91■■□□□ 1.42
DDR1-254ENST00000504679 EZH2Q15910 746 aaKnown RBP23.91■■□□□ 1.42
DDR1-254ENST00000504679 ASAP1Q9ULH1 1129 aa23.9■■□□□ 1.42
DDR1-254ENST00000504679 CEMIPQ8WUJ3 1361 aa23.9■■□□□ 1.42
DDR1-254ENST00000504679 ATG3Q9NT62 314 aa23.89■■□□□ 1.41
DDR1-254ENST00000504679 ADAMTS7Q9UKP4 1686 aa23.89■■□□□ 1.41
DDR1-254ENST00000504679 TAF7Q15545 349 aaPredicted RBP23.87■■□□□ 1.41
DDR1-254ENST00000504679 TXNRD1Q16881 649 aa23.87■■□□□ 1.41
DDR1-254ENST00000504679 HMGB2P26583 209 aaKnown RBP23.86■■□□□ 1.41
DDR1-254ENST00000504679 PROM2Q8N271 834 aa23.86■■□□□ 1.41
DDR1-254ENST00000504679 TRIM35Q9UPQ4 493 aa23.86■■□□□ 1.41
DDR1-254ENST00000504679 BTBD11A6QL63 1104 aa23.85■■□□□ 1.41
DDR1-254ENST00000504679 NCBP3Q53F19 620 aaKnown RBP23.85■■□□□ 1.41
DDR1-254ENST00000504679 SLC27A3Q5K4L6 730 aa23.85■■□□□ 1.41
DDR1-254ENST00000504679 PALLDQ8WX93 1383 aa23.85■■□□□ 1.41
DDR1-254ENST00000504679 THUMPD2Q9BTF0 503 aaKnown RBP23.84■■□□□ 1.41
DDR1-254ENST00000504679 MRC1P22897 1456 aa23.83■■□□□ 1.41
DDR1-254ENST00000504679 SLC39A6Q13433 755 aa23.83■■□□□ 1.41
DDR1-254ENST00000504679 TTC5Q8N0Z6 440 aa23.83■■□□□ 1.41
DDR1-254ENST00000504679 RBM42Q9BTD8 480 aaKnown RBP23.83■■□□□ 1.41
DDR1-254ENST00000504679 NGEFQ8N5V2 710 aa23.82■■□□□ 1.4
DDR1-254ENST00000504679 CCNL1Q9UK58 526 aaPredicted RBP23.82■■□□□ 1.4
DDR1-254ENST00000504679 RGPD3A6NKT7 1758 aaPredicted RBP23.81■■□□□ 1.4
DDR1-254ENST00000504679 RGPD4Q7Z3J3 1758 aa23.81■■□□□ 1.4
DDR1-254ENST00000504679 SENP3-EIF4A1A0A087X0R7 540 aa23.81■■□□□ 1.4
DDR1-254ENST00000504679 LOC102724428A0A0B4J2F2 783 aa23.81■■□□□ 1.4
DDR1-254ENST00000504679 PTCD1O75127 700 aaKnown RBP23.81■■□□□ 1.4
DDR1-254ENST00000504679 SIK1P57059 783 aa23.81■■□□□ 1.4
DDR1-254ENST00000504679 CALD1Q05682 793 aaKnown RBP23.81■■□□□ 1.4
DDR1-254ENST00000504679 CCDC27Q2M243 656 aa23.81■■□□□ 1.4
DDR1-254ENST00000504679 ZNF790Q6PG37 636 aa23.81■■□□□ 1.4
DDR1-254ENST00000504679 SALL2Q9Y467 1007 aaPredicted RBP23.8■■□□□ 1.4
DDR1-254ENST00000504679 ATP6V1AP38606 617 aa23.79■■□□□ 1.4
DDR1-254ENST00000504679 NBPF14Q5TI25 921 aa23.79■■□□□ 1.4
DDR1-254ENST00000504679 LRRC4BQ9NT99 713 aa23.79■■□□□ 1.4
DDR1-254ENST00000504679 BABAM1Q9NWV8 329 aa23.79■■□□□ 1.4
DDR1-254ENST00000504679 MIS18AQ9NYP9 233 aa23.78■■□□□ 1.4
DDR1-254ENST00000504679 LY75O60449 1722 aa23.78■■□□□ 1.4
DDR1-254ENST00000504679 SIPA1L3O60292 1781 aaPredicted RBP23.78■■□□□ 1.4
DDR1-254ENST00000504679 KCNQ4P56696 695 aa23.77■■□□□ 1.4
DDR1-254ENST00000504679 WWC1Q8IX03 1113 aa23.77■■□□□ 1.4
DDR1-254ENST00000504679 LAS1LQ9Y4W2 734 aaKnown RBP23.76■■□□□ 1.39
DDR1-254ENST00000504679 FMNL2Q96PY5 1086 aa23.75■■□□□ 1.39
DDR1-254ENST00000504679 TSPYL4Q9UJ04 414 aa23.75■■□□□ 1.39
DDR1-254ENST00000504679 KCNQ3O43525 872 aa23.74■■□□□ 1.39
DDR1-254ENST00000504679 VSIG10Q8N0Z9 540 aa23.74■■□□□ 1.39
DDR1-254ENST00000504679 CHL1O00533 1208 aa23.73■■□□□ 1.39
DDR1-254ENST00000504679 ZNF496Q96IT1 587 aaPredicted RBP23.73■■□□□ 1.39
DDR1-254ENST00000504679 CFAP44Q96MT7 982 aa23.73■■□□□ 1.39
DDR1-254ENST00000504679 SLC4A9Q96Q91 983 aa23.73■■□□□ 1.39
DDR1-254ENST00000504679 RREB1Q92766 1687 aa23.73■■□□□ 1.39
DDR1-254ENST00000504679 GNAI1P63096 354 aa23.72■■□□□ 1.39
DDR1-254ENST00000504679 WDR63Q8IWG1 891 aa23.72■■□□□ 1.39
DDR1-254ENST00000504679 TEX13AQ9BXU3 409 aaPredicted RBP23.72■■□□□ 1.39
DDR1-254ENST00000504679 STK32BQ9NY57 414 aa23.72■■□□□ 1.39
DDR1-254ENST00000504679 ITPK1Q13572 414 aa23.71■■□□□ 1.39
DDR1-254ENST00000504679 PAPPAQ13219 1627 aa23.7■■□□□ 1.39
DDR1-254ENST00000504679 IFT57Q9NWB7 429 aa23.7■■□□□ 1.38
DDR1-254ENST00000504679 HEG1Q9ULI3 1381 aa23.69■■□□□ 1.38
DDR1-254ENST00000504679 SLC15A2Q16348 729 aa23.69■■□□□ 1.38
DDR1-254ENST00000504679 NUP188Q5SRE5 1749 aa23.69■■□□□ 1.38
DDR1-254ENST00000504679 IL16Q14005 1332 aa23.68■■□□□ 1.38
DDR1-254ENST00000504679 ZNF831Q5JPB2 1677 aa23.68■■□□□ 1.38
DDR1-254ENST00000504679 SNRPA1P09661 255 aaKnown RBP23.68■■□□□ 1.38
DDR1-254ENST00000504679 ZNF853P0CG23 659 aa23.68■■□□□ 1.38
DDR1-254ENST00000504679 EIF4A1P60842 406 aaKnown RBP23.68■■□□□ 1.38
DDR1-254ENST00000504679 LINC00116Q8NCU8 138 aa23.68■■□□□ 1.38
DDR1-254ENST00000504679 KCPQ6ZWJ8 1503 aa23.68■■□□□ 1.38
DDR1-254ENST00000504679 DNAJC10Q8IXB1 793 aa23.67■■□□□ 1.38
DDR1-254ENST00000504679 UBR2Q8IWV8 1755 aa23.67■■□□□ 1.38
DDR1-254ENST00000504679 STARD3NLO95772 234 aa23.66■■□□□ 1.38
DDR1-254ENST00000504679 RC3H1Q5TC82 1133 aaKnown RBP23.66■■□□□ 1.38
DDR1-254ENST00000504679 AKT1S1Q96B36 256 aa23.66■■□□□ 1.38
DDR1-254ENST00000504679 AK7Q96M32 723 aa23.66■■□□□ 1.38
DDR1-254ENST00000504679 TFCP2L1Q9NZI6 479 aa23.66■■□□□ 1.38
DDR1-254ENST00000504679 MBIPQ9NS73 344 aa23.65■■□□□ 1.38
DDR1-254ENST00000504679 TAF1LQ8IZX4 1826 aa23.65■■□□□ 1.38
DDR1-254ENST00000504679 ANO8Q9HCE9 1232 aaPredicted RBP23.64■■□□□ 1.37
DDR1-254ENST00000504679 KDM3BQ7LBC6 1761 aa23.64■■□□□ 1.37
DDR1-254ENST00000504679 C5P01031 1676 aa23.64■■□□□ 1.37
DDR1-254ENST00000504679 GIGYF1O75420 1035 aaPredicted RBP23.63■■□□□ 1.37
DDR1-254ENST00000504679 CYP19A1P11511 503 aaPredicted RBP23.63■■□□□ 1.37
DDR1-254ENST00000504679 R3HDM1Q15032 1099 aaKnown RBP23.63■■□□□ 1.37
DDR1-254ENST00000504679 ZNF827Q17R98 1081 aa23.63■■□□□ 1.37
DDR1-254ENST00000504679 CRKLP46109 303 aaKnown RBP23.62■■□□□ 1.37
DDR1-254ENST00000504679 USP16Q9Y5T5 823 aa23.62■■□□□ 1.37
DDR1-254ENST00000504679 CNTNAP4Q9C0A0 1308 aa23.61■■□□□ 1.37
DDR1-254ENST00000504679 HNRNPUQ00839 825 aaKnown RBP eCLIP23.61■■□□□ 1.37
DDR1-254ENST00000504679 ZNF521Q96K83 1311 aa23.6■■□□□ 1.37
DDR1-254ENST00000504679 C4BP0C0L5 1744 aa23.6■■□□□ 1.37
DDR1-254ENST00000504679 PSDA5PKW4 1024 aaPredicted RBP23.6■■□□□ 1.37
DDR1-254ENST00000504679 GOLGA2Q08379 1002 aa23.6■■□□□ 1.37
DDR1-254ENST00000504679 FLAD1Q8NFF5 587 aa23.6■■□□□ 1.37
DDR1-254ENST00000504679 CCDC87Q9NVE4 849 aa23.6■■□□□ 1.37
DDR1-254ENST00000504679 RTCBQ9Y3I0 505 aaKnown RBP23.6■■□□□ 1.37
DDR1-254ENST00000504679 PRAMEF22A3QJZ6 481 aa23.59■■□□□ 1.37
DDR1-254ENST00000504679 GNPATO15228 680 aa23.59■■□□□ 1.37
DDR1-254ENST00000504679 RPS6KA4O75676 772 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms