RNA–Protein interactions for RNA: ENST00000504496.5

KLHL3-205, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 1,832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-205ENST00000504496 REM2Q8IYK8 340 aaPredicted RBP8.4□□□□□ -1.06
KLHL3-205ENST00000504496 C8orf58Q8NAV2 365 aa8.4□□□□□ -1.06
KLHL3-205ENST00000504496 DCCP43146 1447 aa8.4□□□□□ -1.06
KLHL3-205ENST00000504496 NUTM2FA1L443 756 aa8.4□□□□□ -1.07
KLHL3-205ENST00000504496 ZNF853P0CG23 659 aa8.4□□□□□ -1.07
KLHL3-205ENST00000504496 IL13P35225 146 aa8.4□□□□□ -1.07
KLHL3-205ENST00000504496 TPRNQ4KMQ1 711 aa8.4□□□□□ -1.07
KLHL3-205ENST00000504496 TTC22Q5TAA0 569 aa8.4□□□□□ -1.07
KLHL3-205ENST00000504496 NME9Q86XW9 330 aa8.4□□□□□ -1.07
KLHL3-205ENST00000504496 FAM83GA6ND36 823 aa8.39□□□□□ -1.07
KLHL3-205ENST00000504496 APBB1O00213 710 aa8.39□□□□□ -1.07
KLHL3-205ENST00000504496 NCLP19338 710 aaKnown RBP8.39□□□□□ -1.07
KLHL3-205ENST00000504496 DCTN1Q14203 1278 aa8.39□□□□□ -1.07
KLHL3-205ENST00000504496 RABEP1Q15276 862 aa8.39□□□□□ -1.07
KLHL3-205ENST00000504496 PLEKHM2Q8IWE5 1019 aa8.39□□□□□ -1.07
KLHL3-205ENST00000504496 ANP32BQ92688 251 aaKnown RBP8.39□□□□□ -1.07
KLHL3-205ENST00000504496 ZRANB1Q9UGI0 708 aa8.39□□□□□ -1.07
KLHL3-205ENST00000504496 DDX49Q9Y6V7 483 aaKnown RBP8.39□□□□□ -1.07
KLHL3-205ENST00000504496 AATKQ6ZMQ8 1374 aa8.39□□□□□ -1.07
KLHL3-205ENST00000504496 BAG4O95429 457 aaKnown RBP8.38□□□□□ -1.07
KLHL3-205ENST00000504496 INTS3Q68E01 1043 aaKnown RBP8.38□□□□□ -1.07
KLHL3-205ENST00000504496 MCTP1Q6DN14 999 aa8.38□□□□□ -1.07
KLHL3-205ENST00000504496 CASC1Q6TDU7 716 aa8.38□□□□□ -1.07
KLHL3-205ENST00000504496 COG3Q96JB2 828 aa8.38□□□□□ -1.07
KLHL3-205ENST00000504496 ERBB4Q15303 1308 aa8.38□□□□□ -1.07
KLHL3-205ENST00000504496 TTC21BQ7Z4L5 1316 aa8.38□□□□□ -1.07
KLHL3-205ENST00000504496 TTC21AQ8NDW8 1320 aa8.38□□□□□ -1.07
KLHL3-205ENST00000504496 KIF24Q5T7B8 1368 aa8.38□□□□□ -1.07
KLHL3-205ENST00000504496 NASPP49321 788 aaPredicted RBP8.38□□□□□ -1.07
KLHL3-205ENST00000504496 CCDC173Q0VFZ6 552 aa8.38□□□□□ -1.07
KLHL3-205ENST00000504496 RRS1Q15050 365 aaKnown RBP8.38□□□□□ -1.07
KLHL3-205ENST00000504496 C16orf71Q8IYS4 520 aaPredicted RBP8.38□□□□□ -1.07
KLHL3-205ENST00000504496 DCTPP1Q9H773 170 aa8.38□□□□□ -1.07
KLHL3-205ENST00000504496 TMEM94Q12767 1356 aa8.38□□□□□ -1.07
KLHL3-205ENST00000504496 TRPM3Q9HCF6 1732 aaPredicted RBP8.38□□□□□ -1.07
KLHL3-205ENST00000504496 USP31Q70CQ4 1352 aa8.37□□□□□ -1.07
KLHL3-205ENST00000504496 NUCB2P80303 420 aa8.37□□□□□ -1.07
KLHL3-205ENST00000504496 PROSER2Q86WR7 435 aaPredicted RBP8.37□□□□□ -1.07
KLHL3-205ENST00000504496 PLCD3Q8N3E9 789 aa8.37□□□□□ -1.07
KLHL3-205ENST00000504496 RBM33Q96EV2 1170 aaKnown RBP8.37□□□□□ -1.07
KLHL3-205ENST00000504496 MST1RQ04912 1400 aa8.36□□□□□ -1.07
KLHL3-205ENST00000504496 MSH6P52701 1360 aa8.36□□□□□ -1.07
KLHL3-205ENST00000504496 SMARCA5O60264 1052 aaPredicted RBP8.36□□□□□ -1.07
KLHL3-205ENST00000504496 KLHL40Q2TBA0 621 aa8.36□□□□□ -1.07
KLHL3-205ENST00000504496 C14orf37Q86TY3 774 aa8.36□□□□□ -1.07
KLHL3-205ENST00000504496 ANKRD44Q8N8A2 993 aa8.36□□□□□ -1.07
KLHL3-205ENST00000504496 NGDNQ8NEJ9 315 aaKnown RBP8.36□□□□□ -1.07
KLHL3-205ENST00000504496 PEAK1Q9H792 1746 aa8.36□□□□□ -1.07
KLHL3-205ENST00000504496 C1orf167Q5SNV9 1468 aa8.36□□□□□ -1.07
KLHL3-205ENST00000504496 ST18O60284 1047 aa8.36□□□□□ -1.07
KLHL3-205ENST00000504496 PHF8Q9UPP1 1060 aa8.36□□□□□ -1.07
KLHL3-205ENST00000504496 ATP10DQ9P241 1426 aa8.35□□□□□ -1.07
KLHL3-205ENST00000504496 SDSP20132 328 aa8.35□□□□□ -1.07
KLHL3-205ENST00000504496 CAVIN1Q6NZI2 390 aaKnown RBP8.35□□□□□ -1.07
KLHL3-205ENST00000504496 CEP85Q6P2H3 762 aa8.35□□□□□ -1.07
KLHL3-205ENST00000504496 CLEC17AQ6ZS10 378 aa8.35□□□□□ -1.07
KLHL3-205ENST00000504496 RPAP2Q8IXW5 612 aaPredicted RBP8.35□□□□□ -1.07
KLHL3-205ENST00000504496 OTUD7AQ8TE49 926 aaPredicted RBP8.35□□□□□ -1.07
KLHL3-205ENST00000504496 USP26Q9BXU7 913 aa8.35□□□□□ -1.07
KLHL3-205ENST00000504496 C19orf44Q9H6X5 657 aa8.35□□□□□ -1.07
KLHL3-205ENST00000504496 IBTKQ9P2D0 1353 aaPredicted RBP8.34□□□□□ -1.07
KLHL3-205ENST00000504496 HSP90AA2PQ14568 343 aaPredicted RBP8.34□□□□□ -1.07
KLHL3-205ENST00000504496 KRT24Q2M2I5 525 aa8.34□□□□□ -1.07
KLHL3-205ENST00000504496 GLIPR1L2Q4G1C9 344 aa8.34□□□□□ -1.07
KLHL3-205ENST00000504496 LTN1O94822 1766 aa8.34□□□□□ -1.07
KLHL3-205ENST00000504496 RGPD1P0DJD0 1748 aa8.34□□□□□ -1.07
KLHL3-205ENST00000504496 ALS2Q96Q42 1657 aa8.34□□□□□ -1.07
KLHL3-205ENST00000504496 RTL1A6NKG5 1358 aa8.34□□□□□ -1.07
KLHL3-205ENST00000504496 PHRF1Q9P1Y6 1649 aaKnown RBP8.34□□□□□ -1.07
KLHL3-205ENST00000504496 REC8O95072 547 aa8.33□□□□□ -1.08
KLHL3-205ENST00000504496 MSNP26038 577 aaKnown RBP8.33□□□□□ -1.08
KLHL3-205ENST00000504496 SULT6B1Q6IMI4 303 aa8.33□□□□□ -1.08
KLHL3-205ENST00000504496 CHRDL2Q6WN34 429 aa8.33□□□□□ -1.08
KLHL3-205ENST00000504496 MCM10Q7L590 875 aa8.33□□□□□ -1.08
KLHL3-205ENST00000504496 AEBP1Q8IUX7 1158 aa8.33□□□□□ -1.08
KLHL3-205ENST00000504496 PPP1R9BQ96SB3 815 aa8.33□□□□□ -1.08
KLHL3-205ENST00000504496 CWC22Q9HCG8 908 aaKnown RBP8.33□□□□□ -1.08
KLHL3-205ENST00000504496 RGS12O14924 1447 aa8.33□□□□□ -1.08
KLHL3-205ENST00000504496 TPM2P07951 284 aa8.33□□□□□ -1.08
KLHL3-205ENST00000504496 ZNF445P59923 1031 aa8.33□□□□□ -1.08
KLHL3-205ENST00000504496 ZSCAN23Q3MJ62 389 aa8.33□□□□□ -1.08
KLHL3-205ENST00000504496 MEIS3Q99687 375 aa8.33□□□□□ -1.08
KLHL3-205ENST00000504496 NFAT5O94916 1531 aa8.32□□□□□ -1.08
KLHL3-205ENST00000504496 PTPRCP08575 1304 aa8.32□□□□□ -1.08
KLHL3-205ENST00000504496 ERC2O15083 957 aa8.32□□□□□ -1.08
KLHL3-205ENST00000504496 HMMRO75330 724 aa8.32□□□□□ -1.08
KLHL3-205ENST00000504496 PRPF40AO75400 957 aaKnown RBP8.32□□□□□ -1.08
KLHL3-205ENST00000504496 CYP2E1P05181 493 aaPredicted RBP8.32□□□□□ -1.08
KLHL3-205ENST00000504496 PKP1Q13835 747 aa8.32□□□□□ -1.08
KLHL3-205ENST00000504496 EIF4A2Q14240 407 aaKnown RBP8.32□□□□□ -1.08
KLHL3-205ENST00000504496 ESCO1Q5FWF5 840 aa8.32□□□□□ -1.08
KLHL3-205ENST00000504496 ZSCAN30Q86W11 494 aa8.32□□□□□ -1.08
KLHL3-205ENST00000504496 ZGPATQ8N5A5 531 aaKnown RBP8.32□□□□□ -1.08
KLHL3-205ENST00000504496 LMBRD1Q9NUN5 540 aa8.32□□□□□ -1.08
KLHL3-205ENST00000504496 RBM27Q9P2N5 1060 aaKnown RBP8.32□□□□□ -1.08
KLHL3-205ENST00000504496 SLIT3O75094 1523 aa8.32□□□□□ -1.08
KLHL3-205ENST00000504496 ZNF335Q9H4Z2 1342 aaPredicted RBP8.32□□□□□ -1.08
KLHL3-205ENST00000504496 RRP9O43818 475 aaKnown RBP8.31□□□□□ -1.08
KLHL3-205ENST00000504496 ATF3P18847 181 aa8.31□□□□□ -1.08
KLHL3-205ENST00000504496 FOXD4L5Q5VV16 416 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms