RNA–Protein interactions for RNA: ENST00000504487.5

CCDC149-204, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC149, Length 3,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-204ENST00000504487 TSPYL6Q8N831 410 aa10.26□□□□□ -0.77
CCDC149-204ENST00000504487 TNMDQ9H2S6 317 aa10.26□□□□□ -0.77
CCDC149-204ENST00000504487 PRDM15P57071 1507 aaPredicted RBP10.26□□□□□ -0.77
CCDC149-204ENST00000504487 ATP7AQ04656 1500 aa10.26□□□□□ -0.77
CCDC149-204ENST00000504487 CLASP1Q7Z460 1538 aa10.26□□□□□ -0.77
CCDC149-204ENST00000504487 TSPOAP1O95153 1857 aa10.26□□□□□ -0.77
CCDC149-204ENST00000504487 GORABQ5T7V8 394 aa10.26□□□□□ -0.77
CCDC149-204ENST00000504487 FILIP1Q7Z7B0 1213 aa10.26□□□□□ -0.77
CCDC149-204ENST00000504487 HOMER1Q86YM7 354 aa10.26□□□□□ -0.77
CCDC149-204ENST00000504487 FBXW7Q969H0 707 aa10.26□□□□□ -0.77
CCDC149-204ENST00000504487 NUP62CLQ9H1M0 184 aa10.26□□□□□ -0.77
CCDC149-204ENST00000504487 PYCARDQ9ULZ3 195 aa10.26□□□□□ -0.77
CCDC149-204ENST00000504487 ADGBQ8N7X0 1667 aa10.26□□□□□ -0.77
CCDC149-204ENST00000504487 PDIA4P13667 645 aaKnown RBP10.26□□□□□ -0.77
CCDC149-204ENST00000504487 GABPB1Q06547 395 aaPredicted RBP10.26□□□□□ -0.77
CCDC149-204ENST00000504487 MAP3K11Q16584 847 aa10.26□□□□□ -0.77
CCDC149-204ENST00000504487 DCTPP1Q9H773 170 aa10.26□□□□□ -0.77
CCDC149-204ENST00000504487 ZDHHC9Q9Y397 364 aa10.26□□□□□ -0.77
CCDC149-204ENST00000504487 TNRQ92752 1358 aa10.25□□□□□ -0.77
CCDC149-204ENST00000504487 E9PCH4 1651 aa10.25□□□□□ -0.77
CCDC149-204ENST00000504487 PTPN14Q15678 1187 aa10.25□□□□□ -0.77
CCDC149-204ENST00000504487 MRPL50Q8N5N7 158 aaKnown RBP10.25□□□□□ -0.77
CCDC149-204ENST00000504487 TRMT1Q9NXH9 659 aaKnown RBP10.25□□□□□ -0.77
CCDC149-204ENST00000504487 ATAD2Q6PL18 1390 aa10.25□□□□□ -0.77
CCDC149-204ENST00000504487 FERMT3Q86UX7 667 aa10.25□□□□□ -0.77
CCDC149-204ENST00000504487 DNAJC2Q99543 621 aaKnown RBP10.25□□□□□ -0.77
CCDC149-204ENST00000504487 TRPM1Q7Z4N2 1603 aa10.25□□□□□ -0.77
CCDC149-204ENST00000504487 SHANK2Q9UPX8 1470 aa10.25□□□□□ -0.77
CCDC149-204ENST00000504487 FCHSD2O94868 740 aa10.25□□□□□ -0.77
CCDC149-204ENST00000504487 GTF2F1P35269 517 aaKnown RBP eCLIP10.25□□□□□ -0.77
CCDC149-204ENST00000504487 GPS2Q13227 327 aa10.25□□□□□ -0.77
CCDC149-204ENST00000504487 ARHGAP45Q92619 1136 aa10.25□□□□□ -0.77
CCDC149-204ENST00000504487 TSPYL4Q9UJ04 414 aa10.25□□□□□ -0.77
CCDC149-204ENST00000504487 PAXBP1Q9Y5B6 917 aa10.25□□□□□ -0.77
CCDC149-204ENST00000504487 STX6O43752 255 aa10.24□□□□□ -0.77
CCDC149-204ENST00000504487 VAMP4O75379 141 aa10.24□□□□□ -0.77
CCDC149-204ENST00000504487 CYP2E1P05181 493 aaPredicted RBP10.24□□□□□ -0.77
CCDC149-204ENST00000504487 GTF2E1P29083 439 aaPredicted RBP10.24□□□□□ -0.77
CCDC149-204ENST00000504487 GNL2Q13823 731 aaKnown RBP10.24□□□□□ -0.77
CCDC149-204ENST00000504487 SMTNL1A8MU46 457 aa10.24□□□□□ -0.77
CCDC149-204ENST00000504487 MAP4K4O95819 1239 aaPredicted RBP10.24□□□□□ -0.77
CCDC149-204ENST00000504487 CEP135Q66GS9 1140 aa10.24□□□□□ -0.77
CCDC149-204ENST00000504487 PIP4K2BP78356 416 aa10.24□□□□□ -0.77
CCDC149-204ENST00000504487 C1orf141Q5JVX7 400 aa10.24□□□□□ -0.77
CCDC149-204ENST00000504487 PPIP5K1Q6PFW1 1433 aa10.24□□□□□ -0.77
CCDC149-204ENST00000504487 MCM10Q7L590 875 aa10.24□□□□□ -0.77
CCDC149-204ENST00000504487 SRCIN1Q9C0H9 1055 aa10.24□□□□□ -0.77
CCDC149-204ENST00000504487 ARGLU1Q9NWB6 273 aaPredicted RBP10.24□□□□□ -0.77
CCDC149-204ENST00000504487 CLIP2Q9UDT6 1046 aa10.24□□□□□ -0.77
CCDC149-204ENST00000504487 FYB1O15117 783 aa10.23□□□□□ -0.77
CCDC149-204ENST00000504487 KRT85P78386 507 aa10.23□□□□□ -0.77
CCDC149-204ENST00000504487 KIAA1524Q8TCG1 905 aa10.23□□□□□ -0.77
CCDC149-204ENST00000504487 PHF23Q9BUL5 403 aaPredicted RBP10.23□□□□□ -0.77
CCDC149-204ENST00000504487 POLR3GO15318 223 aaPredicted RBP10.23□□□□□ -0.77
CCDC149-204ENST00000504487 ZSCAN22P10073 491 aaPredicted RBP10.23□□□□□ -0.77
CCDC149-204ENST00000504487 KCNA6P17658 529 aa10.23□□□□□ -0.77
CCDC149-204ENST00000504487 AIMP1Q12904 312 aaKnown RBP10.23□□□□□ -0.77
CCDC149-204ENST00000504487 NFE2L2Q16236 605 aa10.23□□□□□ -0.77
CCDC149-204ENST00000504487 CCDC83Q8IWF9 413 aa10.23□□□□□ -0.77
CCDC149-204ENST00000504487 MNS1Q8NEH6 495 aa10.23□□□□□ -0.77
CCDC149-204ENST00000504487 NOL10Q9BSC4 688 aaKnown RBP10.23□□□□□ -0.77
CCDC149-204ENST00000504487 NPATQ14207 1427 aa10.23□□□□□ -0.77
CCDC149-204ENST00000504487 FAM83GA6ND36 823 aa10.23□□□□□ -0.77
CCDC149-204ENST00000504487 DTNBO60941 627 aa10.23□□□□□ -0.77
CCDC149-204ENST00000504487 INTS4Q96HW7 963 aaKnown RBP10.23□□□□□ -0.77
CCDC149-204ENST00000504487 TRIM34Q9BYJ4 488 aa10.23□□□□□ -0.77
CCDC149-204ENST00000504487 LRRCC1Q9C099 1032 aa10.23□□□□□ -0.77
CCDC149-204ENST00000504487 PLA2R1Q13018 1463 aa10.22□□□□□ -0.77
CCDC149-204ENST00000504487 ACEP12821 1306 aa10.22□□□□□ -0.77
CCDC149-204ENST00000504487 ZCCHC11Q5TAX3 1644 aaKnown RBP10.22□□□□□ -0.77
CCDC149-204ENST00000504487 CCAR2Q8N163 923 aaKnown RBP10.22□□□□□ -0.77
CCDC149-204ENST00000504487 ANKRD44Q8N8A2 993 aa10.22□□□□□ -0.77
CCDC149-204ENST00000504487 NUTM2BA6NNL0 878 aaPredicted RBP10.22□□□□□ -0.77
CCDC149-204ENST00000504487 NUTM2EB1AL46 878 aaPredicted RBP10.22□□□□□ -0.77
CCDC149-204ENST00000504487 LARP1BQ659C4 914 aaKnown RBP10.22□□□□□ -0.77
CCDC149-204ENST00000504487 LUZP1Q86V48 1076 aa10.22□□□□□ -0.77
CCDC149-204ENST00000504487 NUTM2AQ8IVF1 878 aaPredicted RBP10.22□□□□□ -0.77
CCDC149-204ENST00000504487 SIRT2Q8IXJ6 389 aa10.22□□□□□ -0.77
CCDC149-204ENST00000504487 FAM200AQ8TCP9 573 aa10.22□□□□□ -0.77
CCDC149-204ENST00000504487 MBIPQ9NS73 344 aa10.22□□□□□ -0.77
CCDC149-204ENST00000504487 SLC4A2P04920 1241 aa10.22□□□□□ -0.77
CCDC149-204ENST00000504487 LTKP29376 864 aa10.22□□□□□ -0.77
CCDC149-204ENST00000504487 PDE1AP54750 535 aa10.22□□□□□ -0.77
CCDC149-204ENST00000504487 DNM1Q05193 864 aaKnown RBP10.22□□□□□ -0.77
CCDC149-204ENST00000504487 HSP90AB2PQ58FF8 381 aa10.22□□□□□ -0.77
CCDC149-204ENST00000504487 KIF18AQ8NI77 898 aa10.22□□□□□ -0.77
CCDC149-204ENST00000504487 ESYT1Q9BSJ8 1104 aa10.22□□□□□ -0.77
CCDC149-204ENST00000504487 AK9Q5TCS8 1911 aa10.21□□□□□ -0.77
CCDC149-204ENST00000504487 LRMPQ12912 555 aa10.21□□□□□ -0.77
CCDC149-204ENST00000504487 ZNF397Q8NF99 534 aaPredicted RBP10.21□□□□□ -0.77
CCDC149-204ENST00000504487 KAT6BQ8WYB5 2073 aa10.21□□□□□ -0.77
CCDC149-204ENST00000504487 H3BQV1 296 aa10.21□□□□□ -0.78
CCDC149-204ENST00000504487 ZKSCAN1P17029 563 aaPredicted RBP10.21□□□□□ -0.78
CCDC149-204ENST00000504487 IFFO2Q5TF58 517 aa10.21□□□□□ -0.78
CCDC149-204ENST00000504487 IL1RAPL2Q9NP60 686 aa10.21□□□□□ -0.78
CCDC149-204ENST00000504487 UHRF1BP1LA0JNW5 1464 aa10.21□□□□□ -0.78
CCDC149-204ENST00000504487 SYNMO15061 1565 aa10.21□□□□□ -0.78
CCDC149-204ENST00000504487 RIMS2Q9UQ26 1411 aa10.21□□□□□ -0.78
CCDC149-204ENST00000504487 C8orf58Q8NAV2 365 aa10.21□□□□□ -0.78
CCDC149-204ENST00000504487 DDX54Q8TDD1 881 aaKnown RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms