RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 LMOD3Q0VAK6 560 aa10.32□□□□□ -0.76
SKP2-203ENST00000504386 PROM2Q8N271 834 aa10.32□□□□□ -0.76
SKP2-203ENST00000504386 SLC52A2Q9HAB3 445 aa10.32□□□□□ -0.76
SKP2-203ENST00000504386 NUP188Q5SRE5 1749 aa10.32□□□□□ -0.76
SKP2-203ENST00000504386 LOC102724428A0A0B4J2F2 783 aa10.31□□□□□ -0.76
SKP2-203ENST00000504386 PSDA5PKW4 1024 aaPredicted RBP10.31□□□□□ -0.76
SKP2-203ENST00000504386 RNMTO43148 476 aaKnown RBP10.31□□□□□ -0.76
SKP2-203ENST00000504386 SLC4A2P04920 1241 aa10.31□□□□□ -0.76
SKP2-203ENST00000504386 SIK1P57059 783 aa10.31□□□□□ -0.76
SKP2-203ENST00000504386 TTC5Q8N0Z6 440 aa10.31□□□□□ -0.76
SKP2-203ENST00000504386 SLC16A10Q8TF71 515 aa10.31□□□□□ -0.76
SKP2-203ENST00000504386 SPON1Q9HCB6 807 aa10.31□□□□□ -0.76
SKP2-203ENST00000504386 TFCP2L1Q9NZI6 479 aa10.31□□□□□ -0.76
SKP2-203ENST00000504386 KDM6AO15550 1401 aaPredicted RBP10.31□□□□□ -0.76
SKP2-203ENST00000504386 NFATC2IPQ8NCF5 419 aa10.3□□□□□ -0.76
SKP2-203ENST00000504386 AK7Q96M32 723 aa10.3□□□□□ -0.76
SKP2-203ENST00000504386 MRC1P22897 1456 aa10.3□□□□□ -0.76
SKP2-203ENST00000504386 EP400Q96L91 3159 aa10.29□□□□□ -0.76
SKP2-203ENST00000504386 ATP6V1AP38606 617 aa10.29□□□□□ -0.76
SKP2-203ENST00000504386 PNISRQ8TF01 805 aaKnown RBP10.29□□□□□ -0.76
SKP2-203ENST00000504386 TEX13AQ9BXU3 409 aaPredicted RBP10.29□□□□□ -0.76
SKP2-203ENST00000504386 ATG3Q9NT62 314 aa10.29□□□□□ -0.76
SKP2-203ENST00000504386 LY75O60449 1722 aa10.28□□□□□ -0.76
SKP2-203ENST00000504386 VSIG10Q8N0Z9 540 aa10.28□□□□□ -0.76
SKP2-203ENST00000504386 AKT1S1Q96B36 256 aa10.28□□□□□ -0.76
SKP2-203ENST00000504386 RBM42Q9BTD8 480 aaKnown RBP10.28□□□□□ -0.76
SKP2-203ENST00000504386 MTFR1LQ9H019 292 aa10.28□□□□□ -0.76
SKP2-203ENST00000504386 ANO8Q9HCE9 1232 aaPredicted RBP10.28□□□□□ -0.76
SKP2-203ENST00000504386 LRRC4BQ9NT99 713 aa10.28□□□□□ -0.76
SKP2-203ENST00000504386 ASAP1Q9ULH1 1129 aa10.28□□□□□ -0.76
SKP2-203ENST00000504386 CEMIPQ8WUJ3 1361 aa10.27□□□□□ -0.76
SKP2-203ENST00000504386 TOGARAM1Q9Y4F4 1720 aa10.27□□□□□ -0.76
SKP2-203ENST00000504386 PAPPAQ13219 1627 aa10.27□□□□□ -0.77
SKP2-203ENST00000504386 SSFA2P28290 1259 aa10.27□□□□□ -0.77
SKP2-203ENST00000504386 NFE2L2Q16236 605 aa10.27□□□□□ -0.77
SKP2-203ENST00000504386 RC3H1Q5TC82 1133 aaKnown RBP10.27□□□□□ -0.77
SKP2-203ENST00000504386 PHACTR3Q96KR7 559 aa10.27□□□□□ -0.77
SKP2-203ENST00000504386 FOXD4L1Q9NU39 408 aa10.27□□□□□ -0.77
SKP2-203ENST00000504386 PPP1R1BQ9UD71 204 aaPredicted RBP10.27□□□□□ -0.77
SKP2-203ENST00000504386 ITGB4P16144 1822 aa10.27□□□□□ -0.77
SKP2-203ENST00000504386 LRP5O75197 1615 aa10.26□□□□□ -0.77
SKP2-203ENST00000504386 ZNF831Q5JPB2 1677 aa10.26□□□□□ -0.77
SKP2-203ENST00000504386 POLD1P28340 1107 aa10.26□□□□□ -0.77
SKP2-203ENST00000504386 NPM2Q86SE8 214 aaKnown RBP10.26□□□□□ -0.77
SKP2-203ENST00000504386 RUNDC1Q96C34 613 aa10.26□□□□□ -0.77
SKP2-203ENST00000504386 PLEKHF1Q96S99 279 aa10.26□□□□□ -0.77
SKP2-203ENST00000504386 LGR6Q9HBX8 967 aa10.26□□□□□ -0.77
SKP2-203ENST00000504386 CNTNAP4Q9C0A0 1308 aa10.26□□□□□ -0.77
SKP2-203ENST00000504386 SCN11AQ9UI33 1791 aa10.26□□□□□ -0.77
SKP2-203ENST00000504386 ADAMTS7Q9UKP4 1686 aa10.25□□□□□ -0.77
SKP2-203ENST00000504386 BTBD11A6QL63 1104 aa10.25□□□□□ -0.77
SKP2-203ENST00000504386 PTCD1O75127 700 aaKnown RBP10.25□□□□□ -0.77
SKP2-203ENST00000504386 STARD3NLO95772 234 aa10.25□□□□□ -0.77
SKP2-203ENST00000504386 CALD1Q05682 793 aaKnown RBP10.25□□□□□ -0.77
SKP2-203ENST00000504386 ZNF827Q17R98 1081 aa10.25□□□□□ -0.77
SKP2-203ENST00000504386 IL17REQ8NFR9 667 aa10.25□□□□□ -0.77
SKP2-203ENST00000504386 FMNL2Q96PY5 1086 aa10.25□□□□□ -0.77
SKP2-203ENST00000504386 RTCBQ9Y3I0 505 aaKnown RBP10.25□□□□□ -0.77
SKP2-203ENST00000504386 GNPATO15228 680 aa10.24□□□□□ -0.77
SKP2-203ENST00000504386 TAF7Q15545 349 aaPredicted RBP10.24□□□□□ -0.77
SKP2-203ENST00000504386 ZNF790Q6PG37 636 aa10.24□□□□□ -0.77
SKP2-203ENST00000504386 BABAM1Q9NWV8 329 aa10.24□□□□□ -0.77
SKP2-203ENST00000504386 C5P01031 1676 aa10.23□□□□□ -0.77
SKP2-203ENST00000504386 RIPK4P57078 832 aa10.23□□□□□ -0.77
SKP2-203ENST00000504386 MRS2Q9HD23 443 aa10.23□□□□□ -0.77
SKP2-203ENST00000504386 QSER1Q2KHR3 1735 aa10.23□□□□□ -0.77
SKP2-203ENST00000504386 PNPLA7Q6ZV29 1317 aa10.23□□□□□ -0.77
SKP2-203ENST00000504386 C4BP0C0L5 1744 aa10.22□□□□□ -0.77
SKP2-203ENST00000504386 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.22□□□□□ -0.77
SKP2-203ENST00000504386 ZBTB22O15209 634 aa10.22□□□□□ -0.77
SKP2-203ENST00000504386 RPS6KA4O75676 772 aa10.22□□□□□ -0.77
SKP2-203ENST00000504386 TMPOP42166 694 aaKnown RBP10.22□□□□□ -0.77
SKP2-203ENST00000504386 KCNQ4P56696 695 aa10.22□□□□□ -0.77
SKP2-203ENST00000504386 TRAPPC3LQ5T215 181 aa10.22□□□□□ -0.77
SKP2-203ENST00000504386 NGEFQ8N5V2 710 aa10.22□□□□□ -0.77
SKP2-203ENST00000504386 LINC00116Q8NCU8 138 aa10.22□□□□□ -0.77
SKP2-203ENST00000504386 CHMP4AQ9BY43 222 aa10.22□□□□□ -0.77
SKP2-203ENST00000504386 ADAMTS8Q9UP79 889 aa10.22□□□□□ -0.77
SKP2-203ENST00000504386 CICQ96RK0 1608 aaPredicted RBP10.22□□□□□ -0.77
SKP2-203ENST00000504386 A0A087WZG4 1122 aa10.21□□□□□ -0.77
SKP2-203ENST00000504386 ZBTB7AO95365 584 aa10.21□□□□□ -0.77
SKP2-203ENST00000504386 SNRPA1P09661 255 aaKnown RBP10.21□□□□□ -0.77
SKP2-203ENST00000504386 RFC4P35249 363 aa10.21□□□□□ -0.77
SKP2-203ENST00000504386 CRKLP46109 303 aaKnown RBP10.21□□□□□ -0.77
SKP2-203ENST00000504386 ITPK1Q13572 414 aa10.21□□□□□ -0.77
SKP2-203ENST00000504386 MCM10Q7L590 875 aa10.21□□□□□ -0.77
SKP2-203ENST00000504386 CCDC87Q9NVE4 849 aa10.21□□□□□ -0.77
SKP2-203ENST00000504386 PHF14O94880 888 aa10.2□□□□□ -0.78
SKP2-203ENST00000504386 SLC39A6Q13433 755 aa10.2□□□□□ -0.78
SKP2-203ENST00000504386 CASZ1Q86V15 1759 aa10.2□□□□□ -0.78
SKP2-203ENST00000504386 COL23A1Q86Y22 540 aaPredicted RBP10.2□□□□□ -0.78
SKP2-203ENST00000504386 NLGN1Q8N2Q7 840 aa10.2□□□□□ -0.78
SKP2-203ENST00000504386 ARXQ96QS3 562 aa10.2□□□□□ -0.78
SKP2-203ENST00000504386 HEG1Q9ULI3 1381 aa10.2□□□□□ -0.78
SKP2-203ENST00000504386 ZPR1O75312 459 aa10.19□□□□□ -0.78
SKP2-203ENST00000504386 DNAJC10Q8IXB1 793 aa10.19□□□□□ -0.78
SKP2-203ENST00000504386 ZNF496Q96IT1 587 aaPredicted RBP10.19□□□□□ -0.78
SKP2-203ENST00000504386 ATF5Q9Y2D1 282 aaPredicted RBP10.19□□□□□ -0.78
SKP2-203ENST00000504386 TAF1LQ8IZX4 1826 aa10.19□□□□□ -0.78
SKP2-203ENST00000504386 KCPQ6ZWJ8 1503 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms