RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 APBA3O96018 575 aa17.44■□□□□ 0.38
PDLIM7-212ENST00000504380 BTAF1O14981 1849 aa17.44■□□□□ 0.38
PDLIM7-212ENST00000504380 CEMIPQ8WUJ3 1361 aa17.43■□□□□ 0.38
PDLIM7-212ENST00000504380 TEFQ10587 303 aa17.43■□□□□ 0.38
PDLIM7-212ENST00000504380 TNS1Q9HBL0 1735 aaKnown RBP17.43■□□□□ 0.38
PDLIM7-212ENST00000504380 SLC39A6Q13433 755 aa17.42■□□□□ 0.38
PDLIM7-212ENST00000504380 MIS18AQ9NYP9 233 aa17.42■□□□□ 0.38
PDLIM7-212ENST00000504380 ASAP1Q9ULH1 1129 aa17.42■□□□□ 0.38
PDLIM7-212ENST00000504380 LMOD3Q0VAK6 560 aa17.41■□□□□ 0.38
PDLIM7-212ENST00000504380 ATG3Q9NT62 314 aa17.41■□□□□ 0.38
PDLIM7-212ENST00000504380 MRC1P22897 1456 aa17.4■□□□□ 0.38
PDLIM7-212ENST00000504380 KCNQ3O43525 872 aa17.4■□□□□ 0.38
PDLIM7-212ENST00000504380 LAS1LQ9Y4W2 734 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-212ENST00000504380 SIPA1L3O60292 1781 aaPredicted RBP17.39■□□□□ 0.37
PDLIM7-212ENST00000504380 BAG6P46379 1132 aa17.39■□□□□ 0.37
PDLIM7-212ENST00000504380 EN1Q05925 392 aaPredicted RBP17.39■□□□□ 0.37
PDLIM7-212ENST00000504380 WWC1Q8IX03 1113 aa17.39■□□□□ 0.37
PDLIM7-212ENST00000504380 PSDA5PKW4 1024 aaPredicted RBP17.38■□□□□ 0.37
PDLIM7-212ENST00000504380 KCNQ4P56696 695 aa17.38■□□□□ 0.37
PDLIM7-212ENST00000504380 TAF7Q15545 349 aaPredicted RBP17.38■□□□□ 0.37
PDLIM7-212ENST00000504380 BTBD11A6QL63 1104 aa17.37■□□□□ 0.37
PDLIM7-212ENST00000504380 HNRNPUQ00839 825 aaKnown RBP eCLIP17.37■□□□□ 0.37
PDLIM7-212ENST00000504380 EZH2Q15910 746 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-212ENST00000504380 PTCD1O75127 700 aaKnown RBP17.36■□□□□ 0.37
PDLIM7-212ENST00000504380 CCDC27Q2M243 656 aa17.36■□□□□ 0.37
PDLIM7-212ENST00000504380 RBM42Q9BTD8 480 aaKnown RBP17.36■□□□□ 0.37
PDLIM7-212ENST00000504380 PALLDQ8WX93 1383 aa17.36■□□□□ 0.37
PDLIM7-212ENST00000504380 PROM2Q8N271 834 aa17.35■□□□□ 0.37
PDLIM7-212ENST00000504380 CAMKK2Q96RR4 588 aa17.34■□□□□ 0.37
PDLIM7-212ENST00000504380 PAPPAQ13219 1627 aa17.33■□□□□ 0.37
PDLIM7-212ENST00000504380 PLSCR1O15162 318 aa17.33■□□□□ 0.36
PDLIM7-212ENST00000504380 TXNRD1Q16881 649 aa17.33■□□□□ 0.36
PDLIM7-212ENST00000504380 ZNF790Q6PG37 636 aa17.33■□□□□ 0.36
PDLIM7-212ENST00000504380 SMARCC1Q92922 1105 aaPredicted RBP17.33■□□□□ 0.36
PDLIM7-212ENST00000504380 SLC4A9Q96Q91 983 aa17.33■□□□□ 0.36
PDLIM7-212ENST00000504380 SPINK5Q9NQ38 1064 aaPredicted RBP17.33■□□□□ 0.36
PDLIM7-212ENST00000504380 TSPYL4Q9UJ04 414 aa17.33■□□□□ 0.36
PDLIM7-212ENST00000504380 NCBP3Q53F19 620 aaKnown RBP17.32■□□□□ 0.36
PDLIM7-212ENST00000504380 TTC5Q8N0Z6 440 aa17.32■□□□□ 0.36
PDLIM7-212ENST00000504380 ZNF496Q96IT1 587 aaPredicted RBP17.32■□□□□ 0.36
PDLIM7-212ENST00000504380 LRRC4BQ9NT99 713 aa17.32■□□□□ 0.36
PDLIM7-212ENST00000504380 ZNF521Q96K83 1311 aa17.31■□□□□ 0.36
PDLIM7-212ENST00000504380 LY75O60449 1722 aa17.31■□□□□ 0.36
PDLIM7-212ENST00000504380 LOC102724428A0A0B4J2F2 783 aa17.31■□□□□ 0.36
PDLIM7-212ENST00000504380 CHL1O00533 1208 aa17.31■□□□□ 0.36
PDLIM7-212ENST00000504380 ZNF853P0CG23 659 aa17.31■□□□□ 0.36
PDLIM7-212ENST00000504380 SIK1P57059 783 aa17.31■□□□□ 0.36
PDLIM7-212ENST00000504380 YTHDC1Q96MU7 727 aaKnown RBP17.31■□□□□ 0.36
PDLIM7-212ENST00000504380 CCNL1Q9UK58 526 aaPredicted RBP17.31■□□□□ 0.36
PDLIM7-212ENST00000504380 KCPQ6ZWJ8 1503 aa17.31■□□□□ 0.36
PDLIM7-212ENST00000504380 KDM3BQ7LBC6 1761 aa17.3■□□□□ 0.36
PDLIM7-212ENST00000504380 CALD1Q05682 793 aaKnown RBP17.3■□□□□ 0.36
PDLIM7-212ENST00000504380 ITPK1Q13572 414 aa17.3■□□□□ 0.36
PDLIM7-212ENST00000504380 WDR63Q8IWG1 891 aa17.3■□□□□ 0.36
PDLIM7-212ENST00000504380 TSR2Q969E8 191 aaKnown RBP17.3■□□□□ 0.36
PDLIM7-212ENST00000504380 CFAP44Q96MT7 982 aa17.3■□□□□ 0.36
PDLIM7-212ENST00000504380 MBIPQ9NS73 344 aa17.3■□□□□ 0.36
PDLIM7-212ENST00000504380 IFT57Q9NWB7 429 aa17.3■□□□□ 0.36
PDLIM7-212ENST00000504380 PRAMEF22A3QJZ6 481 aa17.29■□□□□ 0.36
PDLIM7-212ENST00000504380 ATP6V1AP38606 617 aa17.29■□□□□ 0.36
PDLIM7-212ENST00000504380 GNAI1P63096 354 aa17.29■□□□□ 0.36
PDLIM7-212ENST00000504380 KRT24Q2M2I5 525 aa17.29■□□□□ 0.36
PDLIM7-212ENST00000504380 NGEFQ8N5V2 710 aa17.29■□□□□ 0.36
PDLIM7-212ENST00000504380 CDCA7LQ96GN5 454 aa17.29■□□□□ 0.36
PDLIM7-212ENST00000504380 UBR2Q8IWV8 1755 aa17.28■□□□□ 0.36
PDLIM7-212ENST00000504380 EIF4A1P60842 406 aaKnown RBP17.28■□□□□ 0.36
PDLIM7-212ENST00000504380 R3HDM1Q15032 1099 aaKnown RBP17.28■□□□□ 0.36
PDLIM7-212ENST00000504380 DNAJC10Q8IXB1 793 aa17.28■□□□□ 0.36
PDLIM7-212ENST00000504380 YY1P25490 414 aa17.27■□□□□ 0.36
PDLIM7-212ENST00000504380 FMNL2Q96PY5 1086 aa17.27■□□□□ 0.36
PDLIM7-212ENST00000504380 HEG1Q9ULI3 1381 aa17.27■□□□□ 0.35
PDLIM7-212ENST00000504380 IL16Q14005 1332 aa17.26■□□□□ 0.35
PDLIM7-212ENST00000504380 GOLGA2Q08379 1002 aa17.26■□□□□ 0.35
PDLIM7-212ENST00000504380 LINC00116Q8NCU8 138 aa17.26■□□□□ 0.35
PDLIM7-212ENST00000504380 BABAM1Q9NWV8 329 aa17.26■□□□□ 0.35
PDLIM7-212ENST00000504380 RGPD3A6NKT7 1758 aaPredicted RBP17.25■□□□□ 0.35
PDLIM7-212ENST00000504380 RGPD4Q7Z3J3 1758 aa17.25■□□□□ 0.35
PDLIM7-212ENST00000504380 ELL2O00472 640 aaPredicted RBP17.25■□□□□ 0.35
PDLIM7-212ENST00000504380 SLC27A3Q5K4L6 730 aa17.25■□□□□ 0.35
PDLIM7-212ENST00000504380 RREB1Q92766 1687 aa17.25■□□□□ 0.35
PDLIM7-212ENST00000504380 TJP1Q07157 1748 aa17.24■□□□□ 0.35
PDLIM7-212ENST00000504380 NUP188Q5SRE5 1749 aa17.24■□□□□ 0.35
PDLIM7-212ENST00000504380 FANCIQ9NVI1 1328 aa17.24■□□□□ 0.35
PDLIM7-212ENST00000504380 SMIM5Q71RC9 77 aa17.24■□□□□ 0.35
PDLIM7-212ENST00000504380 USP16Q9Y5T5 823 aa17.24■□□□□ 0.35
PDLIM7-212ENST00000504380 C5P01031 1676 aa17.23■□□□□ 0.35
PDLIM7-212ENST00000504380 SLFN5Q08AF3 891 aa17.23■□□□□ 0.35
PDLIM7-212ENST00000504380 C8orf58Q8NAV2 365 aa17.23■□□□□ 0.35
PDLIM7-212ENST00000504380 ANO8Q9HCE9 1232 aaPredicted RBP17.23■□□□□ 0.35
PDLIM7-212ENST00000504380 TAF1LQ8IZX4 1826 aa17.23■□□□□ 0.35
PDLIM7-212ENST00000504380 GIGYF1O75420 1035 aaPredicted RBP17.22■□□□□ 0.35
PDLIM7-212ENST00000504380 SNRPA1P09661 255 aaKnown RBP17.22■□□□□ 0.35
PDLIM7-212ENST00000504380 ZNF827Q17R98 1081 aa17.22■□□□□ 0.35
PDLIM7-212ENST00000504380 TSPYL6Q8N831 410 aa17.22■□□□□ 0.35
PDLIM7-212ENST00000504380 NECTIN2Q92692 538 aa17.22■□□□□ 0.35
PDLIM7-212ENST00000504380 ZBED9Q6R2W3 1325 aa17.21■□□□□ 0.35
PDLIM7-212ENST00000504380 CYP19A1P11511 503 aaPredicted RBP17.21■□□□□ 0.35
PDLIM7-212ENST00000504380 PIP4K2AP48426 406 aaPredicted RBP17.21■□□□□ 0.35
PDLIM7-212ENST00000504380 EXOSC9Q06265 439 aaKnown RBP17.21■□□□□ 0.35
PDLIM7-212ENST00000504380 DUSP27Q5VZP5 1158 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms