RNA–Protein interactions for RNA: ENST00000504339.1

LINC02239-201, Transcript of long intergenic non-protein coding RNA 2239, humanhuman

TSL 1 (best) BASIC

Gene LINC02239, Length 2,290 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02239-201ENST00000504339 RPAP2Q8IXW5 612 aaPredicted RBP11.34□□□□□ -0.59
LINC02239-201ENST00000504339 CABLES1Q8TDN4 633 aa11.34□□□□□ -0.59
LINC02239-201ENST00000504339 PHAXQ9H814 394 aaKnown RBP11.34□□□□□ -0.59
LINC02239-201ENST00000504339 OTUD7AQ8TE49 926 aaPredicted RBP11.33□□□□□ -0.6
LINC02239-201ENST00000504339 STK31Q9BXU1 1019 aa11.33□□□□□ -0.6
LINC02239-201ENST00000504339 SOS1Q07889 1333 aaPredicted RBP11.33□□□□□ -0.6
LINC02239-201ENST00000504339 KDM4FA0A1W2PPD8 638 aa11.33□□□□□ -0.6
LINC02239-201ENST00000504339 RNMTO43148 476 aaKnown RBP11.33□□□□□ -0.6
LINC02239-201ENST00000504339 CCT4P50991 539 aaKnown RBP11.33□□□□□ -0.6
LINC02239-201ENST00000504339 PLEKHO1Q53GL0 409 aaPredicted RBP11.33□□□□□ -0.6
LINC02239-201ENST00000504339 PLEKHM2Q8IWE5 1019 aa11.33□□□□□ -0.6
LINC02239-201ENST00000504339 LMO7Q8WWI1 1683 aa11.32□□□□□ -0.6
LINC02239-201ENST00000504339 GSPT1P15170 499 aaKnown RBP11.32□□□□□ -0.6
LINC02239-201ENST00000504339 FKBP5Q13451 457 aaPredicted RBP11.32□□□□□ -0.6
LINC02239-201ENST00000504339 AMOTQ4VCS5 1084 aa11.32□□□□□ -0.6
LINC02239-201ENST00000504339 MFAP1P55081 439 aaKnown RBP11.32□□□□□ -0.6
LINC02239-201ENST00000504339 HDGFL1Q5TGJ6 251 aa11.32□□□□□ -0.6
LINC02239-201ENST00000504339 RGPD5Q99666 1765 aa11.31□□□□□ -0.6
LINC02239-201ENST00000504339 SMARCA5O60264 1052 aaPredicted RBP11.31□□□□□ -0.6
LINC02239-201ENST00000504339 CADPS2Q86UW7 1296 aa11.31□□□□□ -0.6
LINC02239-201ENST00000504339 HEG1Q9ULI3 1381 aa11.31□□□□□ -0.6
LINC02239-201ENST00000504339 KDM3BQ7LBC6 1761 aa11.31□□□□□ -0.6
LINC02239-201ENST00000504339 COL18A1P39060 1754 aa11.3□□□□□ -0.6
LINC02239-201ENST00000504339 LMTK3Q96Q04 1460 aa11.3□□□□□ -0.6
LINC02239-201ENST00000504339 PRAMEF22A3QJZ6 481 aa11.3□□□□□ -0.6
LINC02239-201ENST00000504339 BTBD11A6QL63 1104 aa11.3□□□□□ -0.6
LINC02239-201ENST00000504339 EIF2S2P20042 333 aaKnown RBP11.3□□□□□ -0.6
LINC02239-201ENST00000504339 TBC1D2Q9BYX2 928 aa11.3□□□□□ -0.6
LINC02239-201ENST00000504339 C22orf23Q9BZE7 217 aa11.3□□□□□ -0.6
LINC02239-201ENST00000504339 USP44Q9H0E7 712 aa11.3□□□□□ -0.6
LINC02239-201ENST00000504339 CHPF2Q9P2E5 772 aa11.3□□□□□ -0.6
LINC02239-201ENST00000504339 SPATA31A3Q5VYP0 1347 aa11.3□□□□□ -0.6
LINC02239-201ENST00000504339 PNMA6EA0A0J9YXQ4 647 aa11.29□□□□□ -0.6
LINC02239-201ENST00000504339 ANXA1P04083 346 aa11.29□□□□□ -0.6
LINC02239-201ENST00000504339 CHRNA2Q15822 529 aa11.29□□□□□ -0.6
LINC02239-201ENST00000504339 BRINP3Q76B58 766 aa11.29□□□□□ -0.6
LINC02239-201ENST00000504339 NPHP3Q7Z494 1330 aa11.29□□□□□ -0.6
LINC02239-201ENST00000504339 XIRP1Q702N8 1843 aaKnown RBP11.29□□□□□ -0.6
LINC02239-201ENST00000504339 TNS3Q68CZ2 1445 aa11.29□□□□□ -0.6
LINC02239-201ENST00000504339 TEFQ10587 303 aa11.29□□□□□ -0.6
LINC02239-201ENST00000504339 TBC1D9Q6ZT07 1266 aa11.29□□□□□ -0.6
LINC02239-201ENST00000504339 UPF2Q9HAU5 1272 aaKnown RBP11.29□□□□□ -0.6
LINC02239-201ENST00000504339 OVOS2A0A0G2JMS6 1433 aa11.28□□□□□ -0.6
LINC02239-201ENST00000504339 GNAI2P04899 355 aa11.28□□□□□ -0.6
LINC02239-201ENST00000504339 HOXB7P09629 217 aa11.28□□□□□ -0.6
LINC02239-201ENST00000504339 USP35Q9P2H5 1018 aa11.28□□□□□ -0.6
LINC02239-201ENST00000504339 ADAMTS7Q9UKP4 1686 aa11.28□□□□□ -0.6
LINC02239-201ENST00000504339 MEGF6O75095 1541 aa11.28□□□□□ -0.6
LINC02239-201ENST00000504339 APBB1O00213 710 aa11.28□□□□□ -0.6
LINC02239-201ENST00000504339 GIGYF1O75420 1035 aaPredicted RBP11.28□□□□□ -0.6
LINC02239-201ENST00000504339 PROSER3Q2NL68 480 aa11.28□□□□□ -0.6
LINC02239-201ENST00000504339 C1orf141Q5JVX7 400 aa11.28□□□□□ -0.6
LINC02239-201ENST00000504339 KIF2CQ99661 725 aa11.28□□□□□ -0.6
LINC02239-201ENST00000504339 STRCQ7RTU9 1775 aa11.28□□□□□ -0.6
LINC02239-201ENST00000504339 KDM6AO15550 1401 aaPredicted RBP11.27□□□□□ -0.6
LINC02239-201ENST00000504339 RBM25P49756 843 aaKnown RBP11.27□□□□□ -0.61
LINC02239-201ENST00000504339 ANTXR1Q9H6X2 564 aa11.27□□□□□ -0.61
LINC02239-201ENST00000504339 NLRP2Q9NX02 1062 aa11.27□□□□□ -0.61
LINC02239-201ENST00000504339 CRYBG1Q9Y4K1 1723 aa11.27□□□□□ -0.61
LINC02239-201ENST00000504339 ZNF335Q9H4Z2 1342 aaPredicted RBP11.27□□□□□ -0.61
LINC02239-201ENST00000504339 TTC22Q5TAA0 569 aa11.26□□□□□ -0.61
LINC02239-201ENST00000504339 PXDNLA1KZ92 1463 aa11.26□□□□□ -0.61
LINC02239-201ENST00000504339 ADCY9O60503 1353 aa11.26□□□□□ -0.61
LINC02239-201ENST00000504339 PI4KAP2A4QPH2 592 aa11.26□□□□□ -0.61
LINC02239-201ENST00000504339 ATP8B2P98198 1209 aa11.26□□□□□ -0.61
LINC02239-201ENST00000504339 BEND3Q5T5X7 828 aa11.26□□□□□ -0.61
LINC02239-201ENST00000504339 PI4KAP1Q8N8J0 262 aa11.26□□□□□ -0.61
LINC02239-201ENST00000504339 DAXXQ9UER7 740 aaPredicted RBP11.26□□□□□ -0.61
LINC02239-201ENST00000504339 LRRFIP2Q9Y608 721 aaKnown RBP11.26□□□□□ -0.61
LINC02239-201ENST00000504339 SALL3Q9BXA9 1300 aa11.26□□□□□ -0.61
LINC02239-201ENST00000504339 GNAI3P08754 354 aa11.25□□□□□ -0.61
LINC02239-201ENST00000504339 NFKBIBQ15653 356 aa11.25□□□□□ -0.61
LINC02239-201ENST00000504339 EXOC6BQ9Y2D4 811 aa11.25□□□□□ -0.61
LINC02239-201ENST00000504339 CACNA1FO60840 1977 aa11.25□□□□□ -0.61
LINC02239-201ENST00000504339 CYP27B1O15528 508 aa11.25□□□□□ -0.61
LINC02239-201ENST00000504339 PHKG2P15735 406 aa11.25□□□□□ -0.61
LINC02239-201ENST00000504339 SIPA1L3O60292 1781 aaPredicted RBP11.25□□□□□ -0.61
LINC02239-201ENST00000504339 CPDO75976 1380 aa11.25□□□□□ -0.61
LINC02239-201ENST00000504339 N4BP2Q86UW6 1770 aaPredicted RBP11.24□□□□□ -0.61
LINC02239-201ENST00000504339 NBPF7P0C2Y1 421 aaPredicted RBP11.24□□□□□ -0.61
LINC02239-201ENST00000504339 SLC39A6Q13433 755 aa11.24□□□□□ -0.61
LINC02239-201ENST00000504339 PDIA6Q15084 440 aa11.24□□□□□ -0.61
LINC02239-201ENST00000504339 HMMRO75330 724 aa11.24□□□□□ -0.61
LINC02239-201ENST00000504339 SDSP20132 328 aa11.24□□□□□ -0.61
LINC02239-201ENST00000504339 DNAAF4Q8WXU2 420 aa11.24□□□□□ -0.61
LINC02239-201ENST00000504339 RAPGEF4Q8WZA2 1011 aa11.24□□□□□ -0.61
LINC02239-201ENST00000504339 SOS2Q07890 1332 aaPredicted RBP11.23□□□□□ -0.61
LINC02239-201ENST00000504339 BECN1Q14457 450 aa11.23□□□□□ -0.61
LINC02239-201ENST00000504339 SRCIN1Q9C0H9 1055 aa11.23□□□□□ -0.61
LINC02239-201ENST00000504339 OSBPL3Q9H4L5 887 aa11.23□□□□□ -0.61
LINC02239-201ENST00000504339 SLC52A2Q9HAB3 445 aa11.23□□□□□ -0.61
LINC02239-201ENST00000504339 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.23□□□□□ -0.61
LINC02239-201ENST00000504339 SLAIN2Q9P270 581 aa11.23□□□□□ -0.61
LINC02239-201ENST00000504339 CDC45O75419 566 aa11.23□□□□□ -0.61
LINC02239-201ENST00000504339 PDE1AP54750 535 aa11.23□□□□□ -0.61
LINC02239-201ENST00000504339 TSHZ3Q63HK5 1081 aa11.23□□□□□ -0.61
LINC02239-201ENST00000504339 NFATC2IPQ8NCF5 419 aa11.23□□□□□ -0.61
LINC02239-201ENST00000504339 SSH3Q8TE77 659 aa11.23□□□□□ -0.61
LINC02239-201ENST00000504339 DBF4Q9UBU7 674 aaPredicted RBP11.23□□□□□ -0.61
LINC02239-201ENST00000504339 IBTKQ9P2D0 1353 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms