RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 RIPK4P57078 832 aa14.67□□□□□ -0.06
VCAN-205ENST00000503923 LMOD3Q0VAK6 560 aa14.67□□□□□ -0.06
VCAN-205ENST00000503923 TEFQ10587 303 aa14.67□□□□□ -0.06
VCAN-205ENST00000503923 FAM9BQ8IZU0 186 aa14.67□□□□□ -0.06
VCAN-205ENST00000503923 RREB1Q92766 1687 aa14.66□□□□□ -0.06
VCAN-205ENST00000503923 PALLDQ8WX93 1383 aa14.66□□□□□ -0.06
VCAN-205ENST00000503923 TXNRD1Q16881 649 aa14.66□□□□□ -0.06
VCAN-205ENST00000503923 MCM10Q7L590 875 aa14.66□□□□□ -0.06
VCAN-205ENST00000503923 LY75O60449 1722 aa14.66□□□□□ -0.06
VCAN-205ENST00000503923 APAF1O14727 1248 aa14.65□□□□□ -0.06
VCAN-205ENST00000503923 DCTN1Q14203 1278 aa14.65□□□□□ -0.06
VCAN-205ENST00000503923 NEUROD2Q15784 382 aa14.65□□□□□ -0.06
VCAN-205ENST00000503923 ATG3Q9NT62 314 aa14.65□□□□□ -0.06
VCAN-205ENST00000503923 ASAP1Q9ULH1 1129 aa14.65□□□□□ -0.06
VCAN-205ENST00000503923 RRP7AQ9Y3A4 280 aaKnown RBP14.65□□□□□ -0.06
VCAN-205ENST00000503923 SLC27A3Q5K4L6 730 aa14.64□□□□□ -0.07
VCAN-205ENST00000503923 PROM2Q8N271 834 aa14.64□□□□□ -0.07
VCAN-205ENST00000503923 SIPA1L3O60292 1781 aaPredicted RBP14.64□□□□□ -0.07
VCAN-205ENST00000503923 NUP188Q5SRE5 1749 aa14.63□□□□□ -0.07
VCAN-205ENST00000503923 HMGB2P26583 209 aaKnown RBP14.62□□□□□ -0.07
VCAN-205ENST00000503923 CCNL1Q9UK58 526 aaPredicted RBP14.62□□□□□ -0.07
VCAN-205ENST00000503923 PAPPAQ13219 1627 aa14.62□□□□□ -0.07
VCAN-205ENST00000503923 LOC102724428A0A0B4J2F2 783 aa14.61□□□□□ -0.07
VCAN-205ENST00000503923 BTBD11A6QL63 1104 aa14.61□□□□□ -0.07
VCAN-205ENST00000503923 SIK1P57059 783 aa14.61□□□□□ -0.07
VCAN-205ENST00000503923 TTC5Q8N0Z6 440 aa14.61□□□□□ -0.07
VCAN-205ENST00000503923 THUMPD2Q9BTF0 503 aaKnown RBP14.61□□□□□ -0.07
VCAN-205ENST00000503923 LRRC4BQ9NT99 713 aa14.61□□□□□ -0.07
VCAN-205ENST00000503923 TRIM35Q9UPQ4 493 aa14.61□□□□□ -0.07
VCAN-205ENST00000503923 SLC39A6Q13433 755 aa14.6□□□□□ -0.07
VCAN-205ENST00000503923 TAF7Q15545 349 aaPredicted RBP14.6□□□□□ -0.07
VCAN-205ENST00000503923 NCBP3Q53F19 620 aaKnown RBP14.6□□□□□ -0.07
VCAN-205ENST00000503923 NBPF14Q5TI25 921 aa14.6□□□□□ -0.07
VCAN-205ENST00000503923 RBM42Q9BTD8 480 aaKnown RBP14.6□□□□□ -0.07
VCAN-205ENST00000503923 ATP6V1AP38606 617 aa14.59□□□□□ -0.07
VCAN-205ENST00000503923 ZNF790Q6PG37 636 aa14.59□□□□□ -0.07
VCAN-205ENST00000503923 ZNF831Q5JPB2 1677 aa14.58□□□□□ -0.07
VCAN-205ENST00000503923 PTCD1O75127 700 aaKnown RBP14.58□□□□□ -0.08
VCAN-205ENST00000503923 KCNQ4P56696 695 aa14.58□□□□□ -0.08
VCAN-205ENST00000503923 CCDC27Q2M243 656 aa14.58□□□□□ -0.08
VCAN-205ENST00000503923 UBR2Q8IWV8 1755 aa14.57□□□□□ -0.08
VCAN-205ENST00000503923 KCPQ6ZWJ8 1503 aa14.57□□□□□ -0.08
VCAN-205ENST00000503923 CALD1Q05682 793 aaKnown RBP14.57□□□□□ -0.08
VCAN-205ENST00000503923 NGEFQ8N5V2 710 aa14.57□□□□□ -0.08
VCAN-205ENST00000503923 BABAM1Q9NWV8 329 aa14.57□□□□□ -0.08
VCAN-205ENST00000503923 STK32BQ9NY57 414 aa14.57□□□□□ -0.08
VCAN-205ENST00000503923 C5P01031 1676 aa14.57□□□□□ -0.08
VCAN-205ENST00000503923 TAF1LQ8IZX4 1826 aa14.57□□□□□ -0.08
VCAN-205ENST00000503923 ITPK1Q13572 414 aa14.56□□□□□ -0.08
VCAN-205ENST00000503923 VSIG10Q8N0Z9 540 aa14.56□□□□□ -0.08
VCAN-205ENST00000503923 FMNL2Q96PY5 1086 aa14.56□□□□□ -0.08
VCAN-205ENST00000503923 SLC4A9Q96Q91 983 aa14.56□□□□□ -0.08
VCAN-205ENST00000503923 CICQ96RK0 1608 aaPredicted RBP14.55□□□□□ -0.08
VCAN-205ENST00000503923 KDM3BQ7LBC6 1761 aa14.55□□□□□ -0.08
VCAN-205ENST00000503923 SENP3-EIF4A1A0A087X0R7 540 aa14.55□□□□□ -0.08
VCAN-205ENST00000503923 KCNQ3O43525 872 aa14.55□□□□□ -0.08
VCAN-205ENST00000503923 SLC15A2Q16348 729 aa14.55□□□□□ -0.08
VCAN-205ENST00000503923 ZNF496Q96IT1 587 aaPredicted RBP14.55□□□□□ -0.08
VCAN-205ENST00000503923 ANO8Q9HCE9 1232 aaPredicted RBP14.55□□□□□ -0.08
VCAN-205ENST00000503923 MIS18AQ9NYP9 233 aa14.55□□□□□ -0.08
VCAN-205ENST00000503923 TSPYL4Q9UJ04 414 aa14.55□□□□□ -0.08
VCAN-205ENST00000503923 WWC1Q8IX03 1113 aa14.54□□□□□ -0.08
VCAN-205ENST00000503923 LINC00116Q8NCU8 138 aa14.54□□□□□ -0.08
VCAN-205ENST00000503923 AKT1S1Q96B36 256 aa14.54□□□□□ -0.08
VCAN-205ENST00000503923 HEG1Q9ULI3 1381 aa14.54□□□□□ -0.08
VCAN-205ENST00000503923 C4BP0C0L5 1744 aa14.53□□□□□ -0.08
VCAN-205ENST00000503923 COL5A3P25940 1745 aaPredicted RBP14.53□□□□□ -0.08
VCAN-205ENST00000503923 TJP1Q07157 1748 aa14.53□□□□□ -0.08
VCAN-205ENST00000503923 CHL1O00533 1208 aa14.53□□□□□ -0.08
VCAN-205ENST00000503923 ZNF827Q17R98 1081 aa14.53□□□□□ -0.08
VCAN-205ENST00000503923 CFAP44Q96MT7 982 aa14.53□□□□□ -0.08
VCAN-205ENST00000503923 SALL2Q9Y467 1007 aaPredicted RBP14.53□□□□□ -0.08
VCAN-205ENST00000503923 LAS1LQ9Y4W2 734 aaKnown RBP14.53□□□□□ -0.08
VCAN-205ENST00000503923 GNAI1P63096 354 aa14.52□□□□□ -0.09
VCAN-205ENST00000503923 R3HDM1Q15032 1099 aaKnown RBP14.52□□□□□ -0.09
VCAN-205ENST00000503923 DNAJC10Q8IXB1 793 aa14.52□□□□□ -0.09
VCAN-205ENST00000503923 AK7Q96M32 723 aa14.52□□□□□ -0.09
VCAN-205ENST00000503923 TEX13AQ9BXU3 409 aaPredicted RBP14.52□□□□□ -0.09
VCAN-205ENST00000503923 IFT57Q9NWB7 429 aa14.52□□□□□ -0.09
VCAN-205ENST00000503923 CNTNAP4Q9C0A0 1308 aa14.51□□□□□ -0.09
VCAN-205ENST00000503923 SNRPA1P09661 255 aaKnown RBP14.51□□□□□ -0.09
VCAN-205ENST00000503923 ZNF853P0CG23 659 aa14.51□□□□□ -0.09
VCAN-205ENST00000503923 EIF4A1P60842 406 aaKnown RBP14.51□□□□□ -0.09
VCAN-205ENST00000503923 RC3H1Q5TC82 1133 aaKnown RBP14.51□□□□□ -0.09
VCAN-205ENST00000503923 WDR63Q8IWG1 891 aa14.51□□□□□ -0.09
VCAN-205ENST00000503923 TFCP2L1Q9NZI6 479 aa14.51□□□□□ -0.09
VCAN-205ENST00000503923 IL16Q14005 1332 aa14.5□□□□□ -0.09
VCAN-205ENST00000503923 PSDA5PKW4 1024 aaPredicted RBP14.5□□□□□ -0.09
VCAN-205ENST00000503923 STARD3NLO95772 234 aa14.5□□□□□ -0.09
VCAN-205ENST00000503923 QSER1Q2KHR3 1735 aa14.49□□□□□ -0.09
VCAN-205ENST00000503923 CYP19A1P11511 503 aaPredicted RBP14.49□□□□□ -0.09
VCAN-205ENST00000503923 CRKLP46109 303 aaKnown RBP14.49□□□□□ -0.09
VCAN-205ENST00000503923 MBIPQ9NS73 344 aa14.49□□□□□ -0.09
VCAN-205ENST00000503923 GNPATO15228 680 aa14.48□□□□□ -0.09
VCAN-205ENST00000503923 GIGYF1O75420 1035 aaPredicted RBP14.48□□□□□ -0.09
VCAN-205ENST00000503923 FLAD1Q8NFF5 587 aa14.48□□□□□ -0.09
VCAN-205ENST00000503923 CCDC87Q9NVE4 849 aa14.48□□□□□ -0.09
VCAN-205ENST00000503923 UBR3Q6ZT12 1888 aa14.48□□□□□ -0.09
VCAN-205ENST00000503923 TUBGCP6Q96RT7 1819 aa14.48□□□□□ -0.09
VCAN-205ENST00000503923 MYH14Q7Z406 1995 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms