RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 SLC15A2Q16348 729 aa9.68□□□□□ -0.86
USP46-203ENST00000502443 IL17REQ8NFR9 667 aa9.68□□□□□ -0.86
USP46-203ENST00000502443 RTF1Q92541 710 aaKnown RBP9.68□□□□□ -0.86
USP46-203ENST00000502443 RBM42Q9BTD8 480 aaKnown RBP9.68□□□□□ -0.86
USP46-203ENST00000502443 SLC52A2Q9HAB3 445 aa9.68□□□□□ -0.86
USP46-203ENST00000502443 PTCD1O75127 700 aaKnown RBP9.67□□□□□ -0.86
USP46-203ENST00000502443 HMGB2P26583 209 aaKnown RBP9.67□□□□□ -0.86
USP46-203ENST00000502443 ATP6V1AP38606 617 aa9.67□□□□□ -0.86
USP46-203ENST00000502443 TEFQ10587 303 aa9.67□□□□□ -0.86
USP46-203ENST00000502443 ADAMTS8Q9UP79 889 aa9.67□□□□□ -0.86
USP46-203ENST00000502443 ADAMTS7Q9UKP4 1686 aa9.67□□□□□ -0.86
USP46-203ENST00000502443 PAPPAQ13219 1627 aa9.67□□□□□ -0.86
USP46-203ENST00000502443 DLG5Q8TDM6 1919 aa9.66□□□□□ -0.86
USP46-203ENST00000502443 TAF1LQ8IZX4 1826 aa9.66□□□□□ -0.86
USP46-203ENST00000502443 NFE2L2Q16236 605 aa9.66□□□□□ -0.86
USP46-203ENST00000502443 ZNF827Q17R98 1081 aa9.66□□□□□ -0.86
USP46-203ENST00000502443 CCDC184Q52MB2 194 aa9.66□□□□□ -0.86
USP46-203ENST00000502443 MCM10Q7L590 875 aa9.66□□□□□ -0.86
USP46-203ENST00000502443 CCDC146Q8IYE0 955 aa9.66□□□□□ -0.86
USP46-203ENST00000502443 AKT1S1Q96B36 256 aa9.66□□□□□ -0.86
USP46-203ENST00000502443 TFCP2L1Q9NZI6 479 aa9.66□□□□□ -0.86
USP46-203ENST00000502443 C5P01031 1676 aa9.66□□□□□ -0.86
USP46-203ENST00000502443 MRC1P22897 1456 aa9.66□□□□□ -0.86
USP46-203ENST00000502443 HTATSF1O43719 755 aaKnown RBP9.65□□□□□ -0.86
USP46-203ENST00000502443 SLC39A6Q13433 755 aa9.65□□□□□ -0.86
USP46-203ENST00000502443 DCTN1Q14203 1278 aa9.65□□□□□ -0.86
USP46-203ENST00000502443 PDGFDQ9GZP0 370 aaPredicted RBP9.65□□□□□ -0.86
USP46-203ENST00000502443 CEMIPQ8WUJ3 1361 aa9.64□□□□□ -0.87
USP46-203ENST00000502443 RIPK4P57078 832 aa9.64□□□□□ -0.87
USP46-203ENST00000502443 ITPK1Q13572 414 aa9.64□□□□□ -0.87
USP46-203ENST00000502443 LINC00116Q8NCU8 138 aa9.64□□□□□ -0.87
USP46-203ENST00000502443 RUNDC1Q96C34 613 aa9.64□□□□□ -0.87
USP46-203ENST00000502443 AK7Q96M32 723 aa9.64□□□□□ -0.87
USP46-203ENST00000502443 SLC4A9Q96Q91 983 aa9.64□□□□□ -0.87
USP46-203ENST00000502443 MRS2Q9HD23 443 aa9.64□□□□□ -0.87
USP46-203ENST00000502443 SIPA1L3O60292 1781 aaPredicted RBP9.63□□□□□ -0.87
USP46-203ENST00000502443 C4BP0C0L5 1744 aa9.63□□□□□ -0.87
USP46-203ENST00000502443 BTBD11A6QL63 1104 aa9.63□□□□□ -0.87
USP46-203ENST00000502443 TMPOP42166 694 aaKnown RBP9.63□□□□□ -0.87
USP46-203ENST00000502443 NEUROD2Q15784 382 aa9.63□□□□□ -0.87
USP46-203ENST00000502443 TTC5Q8N0Z6 440 aa9.63□□□□□ -0.87
USP46-203ENST00000502443 RRP7AQ9Y3A4 280 aaKnown RBP9.63□□□□□ -0.87
USP46-203ENST00000502443 TUBGCP6Q96RT7 1819 aa9.63□□□□□ -0.87
USP46-203ENST00000502443 PNPLA7Q6ZV29 1317 aa9.62□□□□□ -0.87
USP46-203ENST00000502443 ZNF831Q5JPB2 1677 aa9.62□□□□□ -0.87
USP46-203ENST00000502443 MSH5O43196 834 aa9.62□□□□□ -0.87
USP46-203ENST00000502443 ZBTB7AO95365 584 aa9.62□□□□□ -0.87
USP46-203ENST00000502443 ZNF790Q6PG37 636 aa9.62□□□□□ -0.87
USP46-203ENST00000502443 THUMPD2Q9BTF0 503 aaKnown RBP9.62□□□□□ -0.87
USP46-203ENST00000502443 CASZ1Q86V15 1759 aa9.62□□□□□ -0.87
USP46-203ENST00000502443 QSER1Q2KHR3 1735 aa9.62□□□□□ -0.87
USP46-203ENST00000502443 GNPATO15228 680 aa9.61□□□□□ -0.87
USP46-203ENST00000502443 LMOD3Q0VAK6 560 aa9.61□□□□□ -0.87
USP46-203ENST00000502443 TAF7Q15545 349 aaPredicted RBP9.61□□□□□ -0.87
USP46-203ENST00000502443 PNISRQ8TF01 805 aaKnown RBP9.61□□□□□ -0.87
USP46-203ENST00000502443 SPON1Q9HCB6 807 aa9.61□□□□□ -0.87
USP46-203ENST00000502443 KCPQ6ZWJ8 1503 aa9.61□□□□□ -0.87
USP46-203ENST00000502443 UBR2Q8IWV8 1755 aa9.6□□□□□ -0.87
USP46-203ENST00000502443 UBR3Q6ZT12 1888 aa9.6□□□□□ -0.87
USP46-203ENST00000502443 COL5A3P25940 1745 aaPredicted RBP9.6□□□□□ -0.87
USP46-203ENST00000502443 KCNQ3O43525 872 aa9.6□□□□□ -0.87
USP46-203ENST00000502443 PHF14O94880 888 aa9.6□□□□□ -0.87
USP46-203ENST00000502443 SMIM5Q71RC9 77 aa9.6□□□□□ -0.87
USP46-203ENST00000502443 COL23A1Q86Y22 540 aaPredicted RBP9.6□□□□□ -0.87
USP46-203ENST00000502443 DNAJC10Q8IXB1 793 aa9.6□□□□□ -0.87
USP46-203ENST00000502443 VSIG10Q8N0Z9 540 aa9.6□□□□□ -0.87
USP46-203ENST00000502443 FLAD1Q8NFF5 587 aa9.6□□□□□ -0.87
USP46-203ENST00000502443 ZNF496Q96IT1 587 aaPredicted RBP9.6□□□□□ -0.87
USP46-203ENST00000502443 MTFR1LQ9H019 292 aa9.6□□□□□ -0.87
USP46-203ENST00000502443 MIS18AQ9NYP9 233 aa9.6□□□□□ -0.87
USP46-203ENST00000502443 ATF5Q9Y2D1 282 aaPredicted RBP9.6□□□□□ -0.87
USP46-203ENST00000502443 LRP5O75197 1615 aa9.6□□□□□ -0.87
USP46-203ENST00000502443 TJP1Q07157 1748 aa9.59□□□□□ -0.87
USP46-203ENST00000502443 CNTNAP4Q9C0A0 1308 aa9.59□□□□□ -0.87
USP46-203ENST00000502443 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.59□□□□□ -0.87
USP46-203ENST00000502443 APAF1O14727 1248 aa9.59□□□□□ -0.87
USP46-203ENST00000502443 SSFA2P28290 1259 aa9.59□□□□□ -0.87
USP46-203ENST00000502443 CRKLP46109 303 aaKnown RBP9.59□□□□□ -0.87
USP46-203ENST00000502443 RC3H1Q5TC82 1133 aaKnown RBP9.59□□□□□ -0.87
USP46-203ENST00000502443 AMIGO3Q86WK7 504 aa9.59□□□□□ -0.87
USP46-203ENST00000502443 SLC16A10Q8TF71 515 aa9.59□□□□□ -0.87
USP46-203ENST00000502443 FMNL2Q96PY5 1086 aa9.59□□□□□ -0.87
USP46-203ENST00000502443 RTCBQ9Y3I0 505 aaKnown RBP9.59□□□□□ -0.87
USP46-203ENST00000502443 MYH14Q7Z406 1995 aaKnown RBP9.59□□□□□ -0.87
USP46-203ENST00000502443 CICQ96RK0 1608 aaPredicted RBP9.58□□□□□ -0.88
USP46-203ENST00000502443 RPS6KA4O75676 772 aa9.58□□□□□ -0.88
USP46-203ENST00000502443 TRAPPC3LQ5T215 181 aa9.58□□□□□ -0.88
USP46-203ENST00000502443 FAM9BQ8IZU0 186 aa9.58□□□□□ -0.88
USP46-203ENST00000502443 TEX13AQ9BXU3 409 aaPredicted RBP9.58□□□□□ -0.88
USP46-203ENST00000502443 TRIM35Q9UPQ4 493 aa9.58□□□□□ -0.88
USP46-203ENST00000502443 HEG1Q9ULI3 1381 aa9.58□□□□□ -0.88
USP46-203ENST00000502443 SRCAPQ6ZRS2 3230 aa9.58□□□□□ -0.88
USP46-203ENST00000502443 SENP3-EIF4A1A0A087X0R7 540 aa9.57□□□□□ -0.88
USP46-203ENST00000502443 STARD3NLO95772 234 aa9.57□□□□□ -0.88
USP46-203ENST00000502443 CYP19A1P11511 503 aaPredicted RBP9.57□□□□□ -0.88
USP46-203ENST00000502443 PTGER2P43116 358 aa9.57□□□□□ -0.88
USP46-203ENST00000502443 DIEXFQ68CQ4 756 aaKnown RBP9.57□□□□□ -0.88
USP46-203ENST00000502443 INTS5Q6P9B9 1019 aaKnown RBP9.57□□□□□ -0.88
USP46-203ENST00000502443 CCDC87Q9NVE4 849 aa9.57□□□□□ -0.88
USP46-203ENST00000502443 PPP1R1BQ9UD71 204 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms