RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 TMOD3Q9NYL9 352 aa9.82□□□□□ -0.84
HLA-DMB-262ENST00000498020 CPSF1Q10570 1443 aaKnown RBP9.82□□□□□ -0.84
HLA-DMB-262ENST00000498020 CDK12Q9NYV4 1490 aaPredicted RBP9.82□□□□□ -0.84
HLA-DMB-262ENST00000498020 USP32Q8NFA0 1604 aa9.82□□□□□ -0.84
HLA-DMB-262ENST00000498020 CDC45O75419 566 aa9.82□□□□□ -0.84
HLA-DMB-262ENST00000498020 ARHGEF28Q8N1W1 1705 aaKnown RBP9.81□□□□□ -0.84
HLA-DMB-262ENST00000498020 HTATSF1O43719 755 aaKnown RBP9.81□□□□□ -0.84
HLA-DMB-262ENST00000498020 NRDCO43847 1150 aa9.81□□□□□ -0.84
HLA-DMB-262ENST00000498020 BRPF1P55201 1214 aaPredicted RBP9.81□□□□□ -0.84
HLA-DMB-262ENST00000498020 ZNF622Q969S3 477 aaKnown RBP eCLIP9.81□□□□□ -0.84
HLA-DMB-262ENST00000498020 TRIM34Q9BYJ4 488 aa9.81□□□□□ -0.84
HLA-DMB-262ENST00000498020 IQSEC2Q5JU85 1478 aa9.81□□□□□ -0.84
HLA-DMB-262ENST00000498020 SBNO1A3KN83 1393 aa9.81□□□□□ -0.84
HLA-DMB-262ENST00000498020 NUCB1Q02818 461 aa9.8□□□□□ -0.84
HLA-DMB-262ENST00000498020 TPRNQ4KMQ1 711 aa9.8□□□□□ -0.84
HLA-DMB-262ENST00000498020 GNAI2P04899 355 aa9.8□□□□□ -0.84
HLA-DMB-262ENST00000498020 MIS18AQ9NYP9 233 aa9.8□□□□□ -0.84
HLA-DMB-262ENST00000498020 TAF7Q15545 349 aaPredicted RBP9.8□□□□□ -0.84
HLA-DMB-262ENST00000498020 CHMP5Q9NZZ3 219 aa9.8□□□□□ -0.84
HLA-DMB-262ENST00000498020 TTLL12Q14166 644 aaPredicted RBP9.8□□□□□ -0.84
HLA-DMB-262ENST00000498020 HDGFL1Q5TGJ6 251 aa9.8□□□□□ -0.84
HLA-DMB-262ENST00000498020 TRPC5Q9UL62 973 aaPredicted RBP9.8□□□□□ -0.84
HLA-DMB-262ENST00000498020 USP6P35125 1406 aa9.79□□□□□ -0.84
HLA-DMB-262ENST00000498020 GOLGA6L4A6NEF3 574 aa9.79□□□□□ -0.84
HLA-DMB-262ENST00000498020 CHL1O00533 1208 aa9.79□□□□□ -0.84
HLA-DMB-262ENST00000498020 INTS3Q68E01 1043 aaKnown RBP9.79□□□□□ -0.84
HLA-DMB-262ENST00000498020 EYA1Q99502 592 aa9.79□□□□□ -0.84
HLA-DMB-262ENST00000498020 TECPR2O15040 1411 aa9.79□□□□□ -0.84
HLA-DMB-262ENST00000498020 ZBTB7BO15156 539 aaPredicted RBP9.79□□□□□ -0.84
HLA-DMB-262ENST00000498020 HMGB2P26583 209 aaKnown RBP9.79□□□□□ -0.84
HLA-DMB-262ENST00000498020 PLCB2Q00722 1185 aa9.79□□□□□ -0.84
HLA-DMB-262ENST00000498020 MTHFSDQ2M296 383 aaKnown RBP9.79□□□□□ -0.84
HLA-DMB-262ENST00000498020 TBC1D32Q96NH3 1257 aa9.79□□□□□ -0.84
HLA-DMB-262ENST00000498020 SIGLEC1Q9BZZ2 1709 aa9.79□□□□□ -0.84
HLA-DMB-262ENST00000498020 REC8O95072 547 aa9.79□□□□□ -0.84
HLA-DMB-262ENST00000498020 TOMM22Q9NS69 142 aa9.79□□□□□ -0.84
HLA-DMB-262ENST00000498020 RFC4P35249 363 aa9.78□□□□□ -0.84
HLA-DMB-262ENST00000498020 GSE1Q14687 1217 aa9.78□□□□□ -0.84
HLA-DMB-262ENST00000498020 BMP2KLQ5H9B9 411 aa9.78□□□□□ -0.84
HLA-DMB-262ENST00000498020 GBP4Q96PP9 640 aa9.78□□□□□ -0.84
HLA-DMB-262ENST00000498020 ZNF853P0CG23 659 aa9.78□□□□□ -0.84
HLA-DMB-262ENST00000498020 GOLGA6L6A8MZA4 724 aa9.78□□□□□ -0.84
HLA-DMB-262ENST00000498020 UBTFL1P0CB47 393 aaPredicted RBP9.78□□□□□ -0.84
HLA-DMB-262ENST00000498020 RIC3Q7Z5B4 369 aa9.78□□□□□ -0.84
HLA-DMB-262ENST00000498020 PSDA5PKW4 1024 aaPredicted RBP9.78□□□□□ -0.84
HLA-DMB-262ENST00000498020 PTMSP20962 102 aa9.78□□□□□ -0.84
HLA-DMB-262ENST00000498020 ARHGEF10O15013 1369 aa9.78□□□□□ -0.84
HLA-DMB-262ENST00000498020 TRIM6-TRIM34B2RNG4 842 aa9.77□□□□□ -0.84
HLA-DMB-262ENST00000498020 FBXO41Q8TF61 875 aa9.77□□□□□ -0.84
HLA-DMB-262ENST00000498020 C9orf78Q9NZ63 289 aaPredicted RBP9.77□□□□□ -0.84
HLA-DMB-262ENST00000498020 CD163L1Q9NR16 1453 aa9.77□□□□□ -0.84
HLA-DMB-262ENST00000498020 RBM5P52756 815 aaKnown RBP eCLIP9.77□□□□□ -0.85
HLA-DMB-262ENST00000498020 PIK3R4Q99570 1358 aa9.77□□□□□ -0.85
HLA-DMB-262ENST00000498020 HOXC9P31274 260 aa9.77□□□□□ -0.85
HLA-DMB-262ENST00000498020 TMEM94Q12767 1356 aa9.77□□□□□ -0.85
HLA-DMB-262ENST00000498020 ST18O60284 1047 aa9.77□□□□□ -0.85
HLA-DMB-262ENST00000498020 CTDP1Q9Y5B0 961 aaPredicted RBP9.77□□□□□ -0.85
HLA-DMB-262ENST00000498020 KIAA0232Q92628 1395 aa9.76□□□□□ -0.85
HLA-DMB-262ENST00000498020 AMOTQ4VCS5 1084 aa9.76□□□□□ -0.85
HLA-DMB-262ENST00000498020 KIF6Q6ZMV9 814 aa9.76□□□□□ -0.85
HLA-DMB-262ENST00000498020 ADAMTS13Q76LX8 1427 aa9.76□□□□□ -0.85
HLA-DMB-262ENST00000498020 L1TD1Q5T7N2 865 aaKnown RBP9.76□□□□□ -0.85
HLA-DMB-262ENST00000498020 DDX58O95786 925 aaKnown RBP9.76□□□□□ -0.85
HLA-DMB-262ENST00000498020 MYL6BP14649 208 aa9.76□□□□□ -0.85
HLA-DMB-262ENST00000498020 HSP90AB4PQ58FF6 505 aa9.76□□□□□ -0.85
HLA-DMB-262ENST00000498020 ANKRD44Q8N8A2 993 aa9.76□□□□□ -0.85
HLA-DMB-262ENST00000498020 SOS1Q07889 1333 aaPredicted RBP9.75□□□□□ -0.85
HLA-DMB-262ENST00000498020 KIF24Q5T7B8 1368 aa9.75□□□□□ -0.85
HLA-DMB-262ENST00000498020 RIMS1Q86UR5 1692 aaKnown RBP9.75□□□□□ -0.85
HLA-DMB-262ENST00000498020 TRIM37O94972 964 aa9.75□□□□□ -0.85
HLA-DMB-262ENST00000498020 FLIIQ13045 1269 aa9.75□□□□□ -0.85
HLA-DMB-262ENST00000498020 NOL10Q9BSC4 688 aaKnown RBP9.75□□□□□ -0.85
HLA-DMB-262ENST00000498020 ABCC4O15439 1325 aa9.75□□□□□ -0.85
HLA-DMB-262ENST00000498020 CLSTN1O94985 981 aa9.75□□□□□ -0.85
HLA-DMB-262ENST00000498020 KRT24Q2M2I5 525 aa9.75□□□□□ -0.85
HLA-DMB-262ENST00000498020 KIAA1211Q6ZU35 1233 aa9.75□□□□□ -0.85
HLA-DMB-262ENST00000498020 GPATCH3Q96I76 525 aa9.75□□□□□ -0.85
HLA-DMB-262ENST00000498020 CCDC85AQ96PX6 553 aaPredicted RBP9.75□□□□□ -0.85
HLA-DMB-262ENST00000498020 SRCIN1Q9C0H9 1055 aa9.75□□□□□ -0.85
HLA-DMB-262ENST00000498020 SETD1BQ9UPS6 1966 aaKnown RBP9.75□□□□□ -0.85
HLA-DMB-262ENST00000498020 DDX11L8A8MPP1 907 aa9.75□□□□□ -0.85
HLA-DMB-262ENST00000498020 SEC24BO95487 1268 aa9.75□□□□□ -0.85
HLA-DMB-262ENST00000498020 BABAM1Q9NWV8 329 aa9.75□□□□□ -0.85
HLA-DMB-262ENST00000498020 ATF5Q9Y2D1 282 aaPredicted RBP9.75□□□□□ -0.85
HLA-DMB-262ENST00000498020 IP6K1Q92551 441 aa9.74□□□□□ -0.85
HLA-DMB-262ENST00000498020 COL3A1P02461 1466 aaPredicted RBP9.74□□□□□ -0.85
HLA-DMB-262ENST00000498020 CDC42BPGQ6DT37 1551 aa9.74□□□□□ -0.85
HLA-DMB-262ENST00000498020 F6X3S4 739 aa9.74□□□□□ -0.85
HLA-DMB-262ENST00000498020 RILPL2Q969X0 211 aa9.74□□□□□ -0.85
HLA-DMB-262ENST00000498020 DCTPP1Q9H773 170 aa9.74□□□□□ -0.85
HLA-DMB-262ENST00000498020 BEGAINQ9BUH8 593 aa9.74□□□□□ -0.85
HLA-DMB-262ENST00000498020 TBC1D2Q9BYX2 928 aa9.74□□□□□ -0.85
HLA-DMB-262ENST00000498020 LRRC7Q96NW7 1537 aa9.73□□□□□ -0.85
HLA-DMB-262ENST00000498020 STARD3NLO95772 234 aa9.73□□□□□ -0.85
HLA-DMB-262ENST00000498020 LRRCC1Q9C099 1032 aa9.73□□□□□ -0.85
HLA-DMB-262ENST00000498020 BTBD11A6QL63 1104 aa9.73□□□□□ -0.85
HLA-DMB-262ENST00000498020 ECM2O94769 699 aaPredicted RBP9.73□□□□□ -0.85
HLA-DMB-262ENST00000498020 MEIS3Q99687 375 aa9.73□□□□□ -0.85
HLA-DMB-262ENST00000498020 ANKARQ7Z5J8 1434 aa9.73□□□□□ -0.85
HLA-DMB-262ENST00000498020 RABEP1Q15276 862 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms